RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 TLR8Q9NR97 1041 aaKnown RBP16.41■□□□□ 0.22
LIMS1-210ENST00000449684 CISHQ9NSE2 258 aa16.41■□□□□ 0.22
LIMS1-210ENST00000449684 GMIPQ9P107 970 aa16.41■□□□□ 0.22
LIMS1-210ENST00000449684 CTNND2Q9UQB3 1225 aa16.41■□□□□ 0.22
LIMS1-210ENST00000449684 KIF26AQ9ULI4 1882 aaPredicted RBP16.41■□□□□ 0.22
LIMS1-210ENST00000449684 PATJQ8NI35 1801 aa16.4■□□□□ 0.22
LIMS1-210ENST00000449684 OTOL1A6NHN0 477 aaPredicted RBP16.4■□□□□ 0.22
LIMS1-210ENST00000449684 TNFRSF10BO14763 440 aa16.4■□□□□ 0.22
LIMS1-210ENST00000449684 OAS1P00973 400 aaKnown RBP16.4■□□□□ 0.22
LIMS1-210ENST00000449684 CD44P16070 742 aaKnown RBP16.4■□□□□ 0.22
LIMS1-210ENST00000449684 GJA4P35212 333 aa16.4■□□□□ 0.22
LIMS1-210ENST00000449684 SLC8A3P57103 927 aa16.4■□□□□ 0.22
LIMS1-210ENST00000449684 MCCD1P59942 119 aaPredicted RBP16.4■□□□□ 0.22
LIMS1-210ENST00000449684 MORC3Q14149 939 aa16.4■□□□□ 0.22
LIMS1-210ENST00000449684 EML3Q32P44 896 aa16.4■□□□□ 0.22
LIMS1-210ENST00000449684 MAMSTRQ6ZN01 415 aa16.4■□□□□ 0.22
LIMS1-210ENST00000449684 TATDN2Q93075 761 aa16.4■□□□□ 0.22
LIMS1-210ENST00000449684 TMEM176AQ96HP8 235 aa16.4■□□□□ 0.22
LIMS1-210ENST00000449684 P2RY13Q9BPV8 354 aa16.4■□□□□ 0.22
LIMS1-210ENST00000449684 LINC00597Q9H2U6 94 aa16.4■□□□□ 0.22
LIMS1-210ENST00000449684 CFAP97Q9P2B7 532 aa16.4■□□□□ 0.22
LIMS1-210ENST00000449684 SH3BP1Q9Y3L3 701 aa16.4■□□□□ 0.22
LIMS1-210ENST00000449684 PTPRZ1P23471 2315 aaPredicted RBP16.39■□□□□ 0.21
LIMS1-210ENST00000449684 TRDMT1O14717 391 aaKnown RBP16.39■□□□□ 0.21
LIMS1-210ENST00000449684 COCHO43405 550 aa16.39■□□□□ 0.21
LIMS1-210ENST00000449684 ATG13O75143 517 aa16.39■□□□□ 0.21
LIMS1-210ENST00000449684 FGFR1OPO95684 399 aaKnown RBP16.39■□□□□ 0.21
LIMS1-210ENST00000449684 ACO1P21399 889 aaKnown RBP16.39■□□□□ 0.21
LIMS1-210ENST00000449684 DRD1P21728 446 aa16.39■□□□□ 0.21
LIMS1-210ENST00000449684 GALK1P51570 392 aa16.39■□□□□ 0.21
LIMS1-210ENST00000449684 STX17P56962 302 aa16.39■□□□□ 0.21
LIMS1-210ENST00000449684 SATB1Q01826 763 aa16.39■□□□□ 0.21
LIMS1-210ENST00000449684 LRMPQ12912 555 aa16.39■□□□□ 0.21
LIMS1-210ENST00000449684 PAK1Q13153 545 aa16.39■□□□□ 0.21
LIMS1-210ENST00000449684 CCINQ13939 588 aa16.39■□□□□ 0.21
LIMS1-210ENST00000449684 CAMK4Q16566 473 aa16.39■□□□□ 0.21
LIMS1-210ENST00000449684 TMEM196Q5HYL7 178 aa16.39■□□□□ 0.21
LIMS1-210ENST00000449684 PPP1R26Q5T8A7 1209 aaPredicted RBP16.39■□□□□ 0.21
LIMS1-210ENST00000449684 Q6ZS52 159 aa16.39■□□□□ 0.21
LIMS1-210ENST00000449684 CLEC20AQ6ZU45 233 aa16.39■□□□□ 0.21
LIMS1-210ENST00000449684 ZMIZ2Q8NF64 920 aa16.39■□□□□ 0.21
LIMS1-210ENST00000449684 WHAMMQ8TF30 809 aa16.39■□□□□ 0.21
LIMS1-210ENST00000449684 CD101Q93033 1021 aa16.39■□□□□ 0.21
LIMS1-210ENST00000449684 FAM124BQ9H5Z6 455 aaPredicted RBP16.39■□□□□ 0.21
LIMS1-210ENST00000449684 IL37Q9NZH6 218 aa16.39■□□□□ 0.21
LIMS1-210ENST00000449684 PPP1R3GB7ZBB8 358 aa16.38■□□□□ 0.21
LIMS1-210ENST00000449684 GNA14O95837 355 aa16.38■□□□□ 0.21
LIMS1-210ENST00000449684 OLFM2O95897 454 aa16.38■□□□□ 0.21
LIMS1-210ENST00000449684 FMO5P49326 533 aa16.38■□□□□ 0.21
LIMS1-210ENST00000449684 TUBP50607 506 aa16.38■□□□□ 0.21
LIMS1-210ENST00000449684 CUL2Q13617 745 aa16.38■□□□□ 0.21
LIMS1-210ENST00000449684 GAS6Q14393 721 aa16.38■□□□□ 0.21
LIMS1-210ENST00000449684 SNX30Q5VWJ9 437 aa16.38■□□□□ 0.21
LIMS1-210ENST00000449684 FSTL4Q6MZW2 842 aa16.38■□□□□ 0.21
LIMS1-210ENST00000449684 KIAA1958Q8N8K9 716 aa16.38■□□□□ 0.21
LIMS1-210ENST00000449684 TRIML1Q8N9V2 468 aa16.38■□□□□ 0.21
LIMS1-210ENST00000449684 SLC35C1Q96A29 364 aa16.38■□□□□ 0.21
LIMS1-210ENST00000449684 ARID3AQ99856 593 aa16.38■□□□□ 0.21
LIMS1-210ENST00000449684 DUSP16Q9BY84 665 aa16.38■□□□□ 0.21
LIMS1-210ENST00000449684 CCSER2Q9H7U1 834 aa16.38■□□□□ 0.21
LIMS1-210ENST00000449684 PNPLA8Q9NP80 782 aa16.38■□□□□ 0.21
LIMS1-210ENST00000449684 TBC1D14Q9P2M4 693 aa16.38■□□□□ 0.21
LIMS1-210ENST00000449684 RAB23Q9ULC3 237 aa16.38■□□□□ 0.21
LIMS1-210ENST00000449684 COQ4Q9Y3A0 265 aa16.38■□□□□ 0.21
LIMS1-210ENST00000449684 RIF1Q5UIP0 2472 aaKnown RBP16.38■□□□□ 0.21
LIMS1-210ENST00000449684 USP34Q70CQ2 3546 aa16.37■□□□□ 0.21
LIMS1-210ENST00000449684 MYO15AQ9UKN7 3530 aa16.37■□□□□ 0.21
LIMS1-210ENST00000449684 FAM92AA1XBS5 289 aa16.37■□□□□ 0.21
LIMS1-210ENST00000449684 SCAMP3O14828 347 aaKnown RBP16.37■□□□□ 0.21
LIMS1-210ENST00000449684 TLR5O60602 858 aa16.37■□□□□ 0.21
LIMS1-210ENST00000449684 EGFP01133 1207 aa16.37■□□□□ 0.21
LIMS1-210ENST00000449684 IRF1P10914 325 aa16.37■□□□□ 0.21
LIMS1-210ENST00000449684 CD19P15391 556 aa16.37■□□□□ 0.21
LIMS1-210ENST00000449684 BMP6P22004 513 aa16.37■□□□□ 0.21
LIMS1-210ENST00000449684 TBXAS1P24557 533 aaPredicted RBP16.37■□□□□ 0.21
LIMS1-210ENST00000449684 ZXDBP98169 803 aa16.37■□□□□ 0.21
LIMS1-210ENST00000449684 GOLGA8FQ08AF8 430 aa16.37■□□□□ 0.21
LIMS1-210ENST00000449684 GOLGA8DPQ0D2H9 430 aa16.37■□□□□ 0.21
LIMS1-210ENST00000449684 FBXO43Q4G163 708 aa16.37■□□□□ 0.21
LIMS1-210ENST00000449684 TTI2Q6NXR4 508 aa16.37■□□□□ 0.21
LIMS1-210ENST00000449684 CREBRFQ8IUR6 639 aa16.37■□□□□ 0.21
LIMS1-210ENST00000449684 SLC4A11Q8NBS3 891 aa16.37■□□□□ 0.21
LIMS1-210ENST00000449684 ZBTB44Q8NCP5 570 aa16.37■□□□□ 0.21
LIMS1-210ENST00000449684 CCDC26Q8TAB7 109 aa16.37■□□□□ 0.21
LIMS1-210ENST00000449684 SECISBP2LQ93073 1101 aaKnown RBP16.37■□□□□ 0.21
LIMS1-210ENST00000449684 CHFRQ96EP1 664 aa16.37■□□□□ 0.21
LIMS1-210ENST00000449684 NT5C1BQ96P26 610 aa16.37■□□□□ 0.21
LIMS1-210ENST00000449684 DUSP9Q99956 384 aaKnown RBP16.37■□□□□ 0.21
LIMS1-210ENST00000449684 KIAA1468Q9P260 1216 aa16.37■□□□□ 0.21
LIMS1-210ENST00000449684 SLC8A2Q9UPR5 921 aa16.37■□□□□ 0.21
LIMS1-210ENST00000449684 SCML2Q9UQR0 700 aa16.37■□□□□ 0.21
LIMS1-210ENST00000449684 E2F8A0AVK6 867 aa16.36■□□□□ 0.21
LIMS1-210ENST00000449684 CYP26A1O43174 497 aa16.36■□□□□ 0.21
LIMS1-210ENST00000449684 RNF40O75150 1001 aa16.36■□□□□ 0.21
LIMS1-210ENST00000449684 ADH1CP00326 375 aa16.36■□□□□ 0.21
LIMS1-210ENST00000449684 CCDC192P0DO97 292 aa16.36■□□□□ 0.21
LIMS1-210ENST00000449684 ATP5C1P36542 298 aaKnown RBP16.36■□□□□ 0.21
LIMS1-210ENST00000449684 RAD23BP54727 409 aa16.36■□□□□ 0.21
LIMS1-210ENST00000449684 HEATR6Q6AI08 1181 aaKnown RBP16.36■□□□□ 0.21
LIMS1-210ENST00000449684 FOXR2Q6PJQ5 311 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms