RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 NOP9Q86U38 636 aaKnown RBP10.39□□□□□ -0.75
CCDC171-203ENST00000449575 ST13P5Q8NFI4 369 aaPredicted RBP10.39□□□□□ -0.75
CCDC171-203ENST00000449575 SCAMP5Q8TAC9 235 aa10.39□□□□□ -0.75
CCDC171-203ENST00000449575 SLC20A1Q8WUM9 679 aa10.39□□□□□ -0.75
CCDC171-203ENST00000449575 SMG7Q92540 1137 aaKnown RBP10.39□□□□□ -0.75
CCDC171-203ENST00000449575 FUBP3Q96I24 572 aaKnown RBP eCLIP10.39□□□□□ -0.75
CCDC171-203ENST00000449575 SPAG5Q96R06 1193 aa10.39□□□□□ -0.75
CCDC171-203ENST00000449575 FAM204AQ9H8W3 233 aa10.39□□□□□ -0.75
CCDC171-203ENST00000449575 ABCB6Q9NP58 842 aa10.39□□□□□ -0.75
CCDC171-203ENST00000449575 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.39□□□□□ -0.75
CCDC171-203ENST00000449575 HHLA1C9JL84 531 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 PIK3R2O00459 728 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 THAP12O43422 761 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 GABBR2O75899 941 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 MICAL2O94851 1124 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 CCDC175P0C221 793 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 HMGA1P17096 107 aaKnown RBP10.38□□□□□ -0.75
CCDC171-203ENST00000449575 SOX5P35711 763 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 MAP9Q49MG5 647 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 ARHGAP17Q68EM7 881 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 DENND1BQ6P3S1 775 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 CACNA2D4Q7Z3S7 1137 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 DNAJB7Q7Z6W7 309 aaPredicted RBP10.38□□□□□ -0.75
CCDC171-203ENST00000449575 GPR149Q86SP6 731 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 TMEM139Q8IV31 216 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 PASD1Q8IV76 773 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 TTC39CQ8N584 583 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 C2orf15Q8WU43 125 aaKnown RBP10.38□□□□□ -0.75
CCDC171-203ENST00000449575 DDX1Q92499 740 aaKnown RBP10.38□□□□□ -0.75
CCDC171-203ENST00000449575 TCEAL4Q96EI5 215 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 SMARCD1Q96GM5 515 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 CORO1BQ9BR76 489 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 LRRC3Q9BY71 257 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 ADAM7Q9H2U9 754 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 FAM124BQ9H5Z6 455 aaPredicted RBP10.38□□□□□ -0.75
CCDC171-203ENST00000449575 ZDHHC7Q9NXF8 308 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 CYTH4Q9UIA0 394 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 CD207Q9UJ71 328 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 MAGED2Q9UNF1 606 aaPredicted RBP10.38□□□□□ -0.75
CCDC171-203ENST00000449575 USP15Q9Y4E8 981 aaPredicted RBP10.38□□□□□ -0.75
CCDC171-203ENST00000449575 EBAG9O00559 213 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 NCK2O43639 380 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 KIF5CO60282 957 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 C1RP00736 705 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 CYP11B1P15538 503 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 CASP14P31944 242 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 MAGEA11P43364 429 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 ALDH1A3P47895 512 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 TUFMP49411 452 aaKnown RBP10.38□□□□□ -0.75
CCDC171-203ENST00000449575 PGFP49763 221 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 SMARCB1Q12824 385 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 PKDCCQ504Y2 493 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 EPS8L1Q8TE68 723 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 HDAC7Q8WUI4 952 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 SGSM3Q96HU1 749 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 POMKQ9H5K3 350 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 CSNK1G1Q9HCP0 422 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 DZANK1Q9NVP4 752 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 TJP2Q9UDY2 1190 aa10.38□□□□□ -0.75
CCDC171-203ENST00000449575 M0QYV0 167 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 TNFRSF10BO14763 440 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 MBTPS2O43462 519 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 FAM200BP0CF97 657 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 IL9P15248 144 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 NPR3P17342 541 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 RFX1P22670 979 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 VSTM1Q6UX27 236 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 TMC8Q8IU68 726 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 WDTC1Q8N5D0 677 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 OLIG1Q8TAK6 271 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 NDRG1Q92597 394 aaKnown RBP10.37□□□□□ -0.75
CCDC171-203ENST00000449575 PSMG2Q969U7 264 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 FAM81BQ96LP2 452 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 DUSP16Q9BY84 665 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 HSFX1Q9UBD0 423 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 NOCTQ9UK39 431 aaKnown RBP10.37□□□□□ -0.75
CCDC171-203ENST00000449575 SLC38A8A6NNN8 435 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 PAPLNO95428 1278 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 RHOP08100 348 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 MMEP08473 750 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 HOXB8P17481 243 aaPredicted RBP10.37□□□□□ -0.75
CCDC171-203ENST00000449575 CHRNB2P17787 502 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 HOXA9P31269 272 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 HNRNPH1P31943 449 aaKnown RBP10.37□□□□□ -0.75
CCDC171-203ENST00000449575 RGS7P49802 495 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 EPHB3P54753 998 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 PLD1Q13393 1074 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 CNGA2Q16280 664 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 WHAMMP3Q1A5X7 153 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 STXBP5Q5T5C0 1151 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 SPECC1LQ69YQ0 1117 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 PMF1Q6P1K2 205 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 LCLAT1Q6UWP7 414 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 GAREM2Q75VX8 874 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 IRF2BP2Q7Z5L9 587 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 TMEM150AQ86TG1 271 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 PIGZQ86VD9 579 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 ANKRD52Q8NB46 1076 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 ITFG1Q8TB96 612 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 SUSD6Q92537 303 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms