RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 CD48P09326 243 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 MLH1P40692 756 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 GDF10P55107 478 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 DGKZQ13574 1117 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 TKFCQ3LXA3 575 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 CERS5Q8N5B7 392 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 CRAMP1Q96RY5 1269 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 PIF1Q9H611 641 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 TASP1Q9H6P5 420 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 CYLDQ9NQC7 956 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 UBP1Q9NZI7 540 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 SLC39A10Q9ULF5 831 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 LRRC42Q9Y546 428 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 ADGRA3Q8IWK6 1321 aa12.86□□□□□ -0.35
UBE3B-204ENST00000449510 MED7O43513 233 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 LCP1P13796 627 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 AQP4P55087 323 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 HDAC4P56524 1084 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 YWHAEP62258 255 aaKnown RBP12.85□□□□□ -0.35
UBE3B-204ENST00000449510 PRKCEQ02156 737 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 TRIM74Q86UV6 250 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 TRIM73Q86UV7 250 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 ANKRD27Q96NW4 1050 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 SLITRK1Q96PX8 696 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 MIPEPQ99797 713 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 TMEM109Q9BVC6 243 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 UBE2OQ9C0C9 1292 aaKnown RBP12.85□□□□□ -0.35
UBE3B-204ENST00000449510 CISHQ9NSE2 258 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 PNPOQ9NVS9 261 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 VAV3Q9UKW4 847 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 AKAP12Q02952 1782 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 AGRPO00253 132 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 ECE2O60344 883 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 PSMD10O75832 226 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 NPTXRO95502 500 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 MMP10P09238 476 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 ITGB5P18084 799 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 ADORA2BP29275 332 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 NT5C2P49902 561 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 NCKAP1LP55160 1127 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 C15orf59Q2T9L4 293 aaPredicted RBP12.85□□□□□ -0.35
UBE3B-204ENST00000449510 GALNTL6Q49A17 601 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 SNRNP48Q6IEG0 339 aaKnown RBP12.85□□□□□ -0.35
UBE3B-204ENST00000449510 CDAN1Q8IWY9 1227 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 USP33Q8TEY7 942 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 SERAC1Q96JX3 654 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 CATSPER2Q96P56 530 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 EFHD1Q9BUP0 239 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 CHD2O14647 1828 aaKnown RBP12.85□□□□□ -0.35
UBE3B-204ENST00000449510 TCRBV7S3A2A0A539 114 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 APOL1O14791 398 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 UGT1A9O60656 530 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 GMNNO75496 209 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 PDGFRBP09619 1106 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 FDX1P10109 184 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 RBL1P28749 1068 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 SLC1A6P48664 564 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 FOLH1Q04609 750 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 LRRC8BQ6P9F7 803 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 NCAPG2Q86XI2 1143 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 PCDH20Q8N6Y1 951 aaKnown RBP12.85□□□□□ -0.35
UBE3B-204ENST00000449510 FAM156AQ8NDB6 213 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 UGT1A7Q9HAW7 530 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 UGT1A10Q9HAW8 530 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 UGT1A8Q9HAW9 530 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 CYP26B1Q9NR63 512 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 SLC7A8Q9UHI5 535 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 RPS6KL1Q9Y6S9 549 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 UMODL1Q5DID0 1318 aa12.85□□□□□ -0.35
UBE3B-204ENST00000449510 ALOX15BO15296 676 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 KRT76Q01546 638 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 CDC16Q13042 620 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 DPYSL3Q14195 570 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 TAF5Q15542 800 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 DHDDSQ86SQ9 333 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 SNX32Q86XE0 403 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 OR5B17Q8NGF7 314 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 ZNF669Q96BR6 464 aaPredicted RBP12.84□□□□□ -0.35
UBE3B-204ENST00000449510 GLIS2Q9BZE0 524 aaPredicted RBP12.84□□□□□ -0.35
UBE3B-204ENST00000449510 RPF1Q9H9Y2 349 aaKnown RBP12.84□□□□□ -0.35
UBE3B-204ENST00000449510 CYP4F12Q9HCS2 524 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 BTBD7Q9P203 1132 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 NOCTQ9UK39 431 aaKnown RBP12.84□□□□□ -0.35
UBE3B-204ENST00000449510 STRIP2Q9ULQ0 834 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 AKT3Q9Y243 479 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 ATF5Q9Y2D1 282 aaPredicted RBP12.84□□□□□ -0.35
UBE3B-204ENST00000449510 ATP6V1G1O75348 118 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 RALBP11234 206 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 VCLP18206 1134 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 PHKA2P46019 1235 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 UGCGQ16739 394 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 SLFN12LQ6IEE8 588 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 CGB2Q6NT52 195 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 TSHZ1Q6ZSZ6 1077 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 LPCAT2Q7L5N7 544 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 FBXO27Q8NI29 283 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 P2RX7Q99572 595 aaKnown RBP12.84□□□□□ -0.35
UBE3B-204ENST00000449510 RIT2Q99578 217 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 ING2Q9H160 280 aa12.84□□□□□ -0.35
UBE3B-204ENST00000449510 UPF3AQ9H1J1 476 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms