RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 SLC6A3Q01959 620 aa14.77□□□□□ -0.04
SHMT2-203ENST00000449049 DUSP6Q16828 381 aa14.77□□□□□ -0.04
SHMT2-203ENST00000449049 PM20D1Q6GTS8 502 aa14.77□□□□□ -0.04
SHMT2-203ENST00000449049 DNAJC24Q6P3W2 148 aa14.77□□□□□ -0.04
SHMT2-203ENST00000449049 SPATA31D4Q6ZUB0 917 aa14.77□□□□□ -0.04
SHMT2-203ENST00000449049 C17orf53Q8N3J3 647 aaPredicted RBP14.77□□□□□ -0.04
SHMT2-203ENST00000449049 SCAMP5Q8TAC9 235 aa14.77□□□□□ -0.04
SHMT2-203ENST00000449049 SLC7A14Q8TBB6 771 aa14.77□□□□□ -0.04
SHMT2-203ENST00000449049 HDAC7Q8WUI4 952 aa14.77□□□□□ -0.04
SHMT2-203ENST00000449049 PIWIL1Q96J94 861 aaKnown RBP14.77□□□□□ -0.04
SHMT2-203ENST00000449049 NUP85Q9BW27 656 aa14.77□□□□□ -0.04
SHMT2-203ENST00000449049 TTYH1Q9H313 450 aaPredicted RBP14.77□□□□□ -0.04
SHMT2-203ENST00000449049 LZTFL1Q9NQ48 299 aa14.77□□□□□ -0.04
SHMT2-203ENST00000449049 CHORDC1Q9UHD1 332 aaPredicted RBP14.77□□□□□ -0.04
SHMT2-203ENST00000449049 SALL4Q9UJQ4 1053 aa14.77□□□□□ -0.04
SHMT2-203ENST00000449049 MTCL1Q9Y4B5 1905 aaKnown RBP14.77□□□□□ -0.05
SHMT2-203ENST00000449049 FAM92AA1XBS5 289 aa14.77□□□□□ -0.05
SHMT2-203ENST00000449049 RTN3O95197 1032 aaPredicted RBP14.77□□□□□ -0.05
SHMT2-203ENST00000449049 ZBED1O96006 694 aa14.77□□□□□ -0.05
SHMT2-203ENST00000449049 C8AP07357 584 aa14.77□□□□□ -0.05
SHMT2-203ENST00000449049 HADHBP55084 474 aaKnown RBP14.77□□□□□ -0.05
SHMT2-203ENST00000449049 TWF1Q12792 350 aa14.77□□□□□ -0.05
SHMT2-203ENST00000449049 PLD1Q13393 1074 aa14.77□□□□□ -0.05
SHMT2-203ENST00000449049 ARHGAP29Q52LW3 1261 aa14.77□□□□□ -0.05
SHMT2-203ENST00000449049 FAM102AQ5T9C2 384 aaPredicted RBP14.77□□□□□ -0.05
SHMT2-203ENST00000449049 SLC26A9Q7LBE3 791 aa14.77□□□□□ -0.05
SHMT2-203ENST00000449049 BHLHA9Q7RTU4 235 aa14.77□□□□□ -0.05
SHMT2-203ENST00000449049 STKLD1Q8NE28 680 aa14.77□□□□□ -0.05
SHMT2-203ENST00000449049 SLC35G2Q8TBE7 412 aa14.77□□□□□ -0.05
SHMT2-203ENST00000449049 GPR152Q8TDT2 470 aa14.77□□□□□ -0.05
SHMT2-203ENST00000449049 IRGQQ8WZA9 623 aa14.77□□□□□ -0.05
SHMT2-203ENST00000449049 CDCA3Q99618 268 aaPredicted RBP14.77□□□□□ -0.05
SHMT2-203ENST00000449049 FBXO44Q9H4M3 255 aa14.77□□□□□ -0.05
SHMT2-203ENST00000449049 PLEKHA4Q9H4M7 779 aa14.77□□□□□ -0.05
SHMT2-203ENST00000449049 COG5Q9UP83 839 aa14.77□□□□□ -0.05
SHMT2-203ENST00000449049 RANBP2P49792 3224 aaKnown RBP14.76□□□□□ -0.05
SHMT2-203ENST00000449049 MYO16Q9Y6X6 1858 aa14.76□□□□□ -0.05
SHMT2-203ENST00000449049 SIGLEC16A6NMB1 481 aa14.76□□□□□ -0.05
SHMT2-203ENST00000449049 SLC38A8A6NNN8 435 aa14.76□□□□□ -0.05
SHMT2-203ENST00000449049 GOLGA8SH3BPF8 625 aa14.76□□□□□ -0.05
SHMT2-203ENST00000449049 SOX1O00570 391 aaPredicted RBP14.76□□□□□ -0.05
SHMT2-203ENST00000449049 PER2O15055 1255 aa14.76□□□□□ -0.05
SHMT2-203ENST00000449049 SART1O43290 800 aaKnown RBP14.76□□□□□ -0.05
SHMT2-203ENST00000449049 USP17L7P0C7H9 530 aa14.76□□□□□ -0.05
SHMT2-203ENST00000449049 EPCAMP16422 314 aa14.76□□□□□ -0.05
SHMT2-203ENST00000449049 USP46P62068 366 aa14.76□□□□□ -0.05
SHMT2-203ENST00000449049 ZNF564Q8TBZ8 553 aaPredicted RBP14.76□□□□□ -0.05
SHMT2-203ENST00000449049 GIPC2Q8TF65 315 aa14.76□□□□□ -0.05
SHMT2-203ENST00000449049 KHSRPQ92945 711 aaKnown RBP eCLIP14.76□□□□□ -0.05
SHMT2-203ENST00000449049 SELENOOQ9BVL4 669 aa14.76□□□□□ -0.05
SHMT2-203ENST00000449049 TTLL2Q9BWV7 592 aa14.76□□□□□ -0.05
SHMT2-203ENST00000449049 TLE6Q9H808 572 aa14.76□□□□□ -0.05
SHMT2-203ENST00000449049 OSGEPQ9NPF4 335 aa14.76□□□□□ -0.05
SHMT2-203ENST00000449049 MAN1C1Q9NR34 630 aa14.76□□□□□ -0.05
SHMT2-203ENST00000449049 METTL5Q9NRN9 209 aaKnown RBP14.76□□□□□ -0.05
SHMT2-203ENST00000449049 ASNSD1Q9NWL6 643 aa14.76□□□□□ -0.05
SHMT2-203ENST00000449049 LMCD1Q9NZU5 365 aa14.76□□□□□ -0.05
SHMT2-203ENST00000449049 CTTNBP2NLQ9P2B4 639 aa14.76□□□□□ -0.05
SHMT2-203ENST00000449049 TMEM59LQ9UK28 342 aa14.76□□□□□ -0.05
SHMT2-203ENST00000449049 SCML2Q9UQR0 700 aa14.76□□□□□ -0.05
SHMT2-203ENST00000449049 GJB6O95452 261 aa14.75□□□□□ -0.05
SHMT2-203ENST00000449049 GLI1P08151 1106 aa14.75□□□□□ -0.05
SHMT2-203ENST00000449049 KRT3P12035 628 aa14.75□□□□□ -0.05
SHMT2-203ENST00000449049 EPHB3P54753 998 aa14.75□□□□□ -0.05
SHMT2-203ENST00000449049 MTMR3Q13615 1198 aa14.75□□□□□ -0.05
SHMT2-203ENST00000449049 KCNC3Q14003 757 aa14.75□□□□□ -0.05
SHMT2-203ENST00000449049 EFHC1Q5JVL4 640 aa14.75□□□□□ -0.05
SHMT2-203ENST00000449049 ARCQ7LC44 396 aa14.75□□□□□ -0.05
SHMT2-203ENST00000449049 RBM23Q86U06 439 aaKnown RBP14.75□□□□□ -0.05
SHMT2-203ENST00000449049 RNF10Q8N5U6 811 aaKnown RBP14.75□□□□□ -0.05
SHMT2-203ENST00000449049 FEZF2Q8TBJ5 459 aa14.75□□□□□ -0.05
SHMT2-203ENST00000449049 CALR3Q96L12 384 aaKnown RBP14.75□□□□□ -0.05
SHMT2-203ENST00000449049 NSUN3Q9H649 340 aaKnown RBP14.75□□□□□ -0.05
SHMT2-203ENST00000449049 EHD2Q9NZN4 543 aa14.75□□□□□ -0.05
SHMT2-203ENST00000449049 GUCA1BQ9UMX6 200 aa14.75□□□□□ -0.05
SHMT2-203ENST00000449049 HCFC2Q9Y5Z7 792 aa14.75□□□□□ -0.05
SHMT2-203ENST00000449049 CHD7Q9P2D1 2997 aa14.75□□□□□ -0.05
SHMT2-203ENST00000449049 CSH1P0DML2 217 aa14.75□□□□□ -0.05
SHMT2-203ENST00000449049 CSH2P0DML3 217 aa14.75□□□□□ -0.05
SHMT2-203ENST00000449049 HMGA1P17096 107 aaKnown RBP14.75□□□□□ -0.05
SHMT2-203ENST00000449049 YWHAQP27348 245 aa14.75□□□□□ -0.05
SHMT2-203ENST00000449049 HOXA9P31269 272 aa14.75□□□□□ -0.05
SHMT2-203ENST00000449049 NRIP1P48552 1158 aa14.75□□□□□ -0.05
SHMT2-203ENST00000449049 VEPH1Q14D04 833 aa14.75□□□□□ -0.05
SHMT2-203ENST00000449049 NDRG1Q92597 394 aaKnown RBP14.75□□□□□ -0.05
SHMT2-203ENST00000449049 PPP2R3CQ969Q6 453 aa14.75□□□□□ -0.05
SHMT2-203ENST00000449049 PSMG2Q969U7 264 aa14.75□□□□□ -0.05
SHMT2-203ENST00000449049 TRMT2BQ96GJ1 504 aaKnown RBP14.75□□□□□ -0.05
SHMT2-203ENST00000449049 MYRFLQ96LU7 910 aa14.75□□□□□ -0.05
SHMT2-203ENST00000449049 MCEEQ96PE7 176 aa14.75□□□□□ -0.05
SHMT2-203ENST00000449049 DPP7Q9UHL4 492 aa14.75□□□□□ -0.05
SHMT2-203ENST00000449049 ASB3Q9Y575 518 aa14.75□□□□□ -0.05
SHMT2-203ENST00000449049 MACROD2A1Z1Q3 448 aa14.74□□□□□ -0.05
SHMT2-203ENST00000449049 TMEM191CA6NGB0 347 aa14.74□□□□□ -0.05
SHMT2-203ENST00000449049 YJEFN3A6XGL0 299 aa14.74□□□□□ -0.05
SHMT2-203ENST00000449049 E7ENQ6 273 aa14.74□□□□□ -0.05
SHMT2-203ENST00000449049 HSF2BPO75031 334 aa14.74□□□□□ -0.05
SHMT2-203ENST00000449049 ZMYND10O75800 440 aa14.74□□□□□ -0.05
SHMT2-203ENST00000449049 RPL7AP62424 266 aaKnown RBP14.74□□□□□ -0.05
SHMT2-203ENST00000449049 IFRD2Q12894 506 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms