RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-208ENST00000447995 TMBIM4Q9HC24 238 aa4.31□□□□□ -1.72
PTPN12-208ENST00000447995 MRPL47Q9HD33 250 aaKnown RBP4.31□□□□□ -1.72
PTPN12-208ENST00000447995 GPRC5CQ9NQ84 441 aa4.31□□□□□ -1.72
PTPN12-208ENST00000447995 A1CFQ9NQ94 594 aaKnown RBP4.31□□□□□ -1.72
PTPN12-208ENST00000447995 ZNF302Q9NR11 478 aa4.31□□□□□ -1.72
PTPN12-208ENST00000447995 PDLIM7Q9NR12 457 aa4.31□□□□□ -1.72
PTPN12-208ENST00000447995 HOMER3Q9NSC5 361 aa4.31□□□□□ -1.72
PTPN12-208ENST00000447995 TAS2R14Q9NYV8 317 aa4.31□□□□□ -1.72
PTPN12-208ENST00000447995 GPRC5DQ9NZD1 345 aa4.31□□□□□ -1.72
PTPN12-208ENST00000447995 RGS17Q9UGC6 210 aaPredicted RBP4.31□□□□□ -1.72
PTPN12-208ENST00000447995 PCYOX1Q9UHG3 505 aa4.31□□□□□ -1.72
PTPN12-208ENST00000447995 AMACRQ9UHK6 382 aa4.31□□□□□ -1.72
PTPN12-208ENST00000447995 FEZ2Q9UHY8 353 aaPredicted RBP4.31□□□□□ -1.72
PTPN12-208ENST00000447995 AGO2Q9UKV8 859 aaKnown RBP4.31□□□□□ -1.72
PTPN12-208ENST00000447995 PLAAQ9Y263 795 aa4.31□□□□□ -1.72
PTPN12-208ENST00000447995 AFG3L2Q9Y4W6 797 aa4.31□□□□□ -1.72
PTPN12-208ENST00000447995 RIPK3Q9Y572 518 aa4.31□□□□□ -1.72
PTPN12-208ENST00000447995 PCDHB2Q9Y5E7 798 aa4.31□□□□□ -1.72
PTPN12-208ENST00000447995 ALG6Q9Y672 507 aa4.31□□□□□ -1.72
PTPN12-208ENST00000447995 STYXL1Q9Y6J8 313 aa4.31□□□□□ -1.72
PTPN12-208ENST00000447995 SCINQ9Y6U3 715 aa4.31□□□□□ -1.72
PTPN12-208ENST00000447995 PHIPQ8WWQ0 1821 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 IGKV6D-21A0A0A0MT36 114 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 A0A0B4J269 797 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 LOC102724159A0A0B4J2E5 919 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 TMEM150BA6NC51 233 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 ZSCAN5CA6NGD5 496 aaPredicted RBP4.3□□□□□ -1.72
PTPN12-208ENST00000447995 LRRIQ4A6NIV6 560 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 TMEM110-MUSTN1A8MSY1 372 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 TISP43B9A030 160 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 K7ERI5 159 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 MYO1FO00160 1098 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 ETV2O00321 342 aaPredicted RBP4.3□□□□□ -1.72
PTPN12-208ENST00000447995 EBAG9O00559 213 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 NDC80O14777 642 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 TTI1O43156 1089 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 DAPK3O43293 454 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 SLC25A27O95847 323 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 CBX7O95931 251 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 GAS8O95995 478 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 HLA-DRAP01903 254 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 MMEP08473 750 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 FAM153BP0C7A2 387 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 ITGA4P13612 1032 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 RAC2P15153 192 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 CHRNB2P17787 502 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 TNNI1P19237 187 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 ECHS1P30084 290 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 MAPK4P31152 587 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 ARL2P36404 184 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 HSD17B3P37058 310 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 KIR3DL1P43629 444 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 NSFP46459 744 aaKnown RBP4.3□□□□□ -1.72
PTPN12-208ENST00000447995 PEX5P50542 639 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 ALDH5A1P51649 535 aaPredicted RBP4.3□□□□□ -1.72
PTPN12-208ENST00000447995 LINC00310P59036 64 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 IRX3P78415 501 aaPredicted RBP4.3□□□□□ -1.72
PTPN12-208ENST00000447995 MRPS25P82663 173 aaKnown RBP4.3□□□□□ -1.72
PTPN12-208ENST00000447995 POU5F1Q01860 360 aaKnown RBP4.3□□□□□ -1.72
PTPN12-208ENST00000447995 CAV1Q03135 178 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 LMNB2Q03252 620 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 IFFO1Q0D2I5 559 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 PTP4A2Q12974 167 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 CALCOCO2Q13137 446 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 TFDP1Q14186 410 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 PWP2Q15269 919 aaKnown RBP4.3□□□□□ -1.72
PTPN12-208ENST00000447995 CYP1B1Q16678 543 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 ZACNQ401N2 412 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 FAM153CQ494X1 144 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 TTMPQ5BVD1 217 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 DENND2CQ68D51 928 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 DUPD1Q68J44 220 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 SLC39A4Q6P5W5 647 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 LRRC31Q6UY01 552 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 ZPBP2Q6X784 338 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 C15orf39Q6ZRI6 1047 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 TRMT1LQ7Z2T5 733 aaKnown RBP4.3□□□□□ -1.72
PTPN12-208ENST00000447995 TMC3Q7Z5M5 1100 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 SLC47A2Q86VL8 602 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 PALB2Q86YC2 1186 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 SLC13A5Q86YT5 568 aaPredicted RBP4.3□□□□□ -1.72
PTPN12-208ENST00000447995 JAMLQ86YT9 394 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 RIOX2Q8IUF8 465 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 HID1Q8IV36 788 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 CCDC60Q8IWA6 550 aaPredicted RBP4.3□□□□□ -1.72
PTPN12-208ENST00000447995 ZBTB8OSQ8IWT0 167 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 CCDC105Q8IYK2 499 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 GPC2Q8N158 579 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 BBOF1Q8ND07 529 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 C3orf20Q8ND61 904 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.3□□□□□ -1.72
PTPN12-208ENST00000447995 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.3□□□□□ -1.72
PTPN12-208ENST00000447995 PLEKHO2Q8TD55 490 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 BCAS4Q8TDM0 211 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 TAS1R2Q8TE23 839 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 UBLCP1Q8WVY7 318 aaPredicted RBP4.3□□□□□ -1.72
PTPN12-208ENST00000447995 PSPC1Q8WXF1 523 aaKnown RBP4.3□□□□□ -1.72
PTPN12-208ENST00000447995 SEPT1Q8WYJ6 367 aa4.3□□□□□ -1.72
PTPN12-208ENST00000447995 RIN2Q8WYP3 895 aaPredicted RBP4.3□□□□□ -1.72
PTPN12-208ENST00000447995 SEMA4DQ92854 862 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms