RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 AP4B1Q9Y6B7 739 aa16.67■□□□□ 0.26
CNOT3-204ENST00000447684 IGLV3-22A0A075B6J6 115 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 DNAJA2O60884 412 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 AVILO75366 819 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 LYPLA1O75608 230 aaPredicted RBP16.66■□□□□ 0.26
CNOT3-204ENST00000447684 TOP3BO95985 862 aaKnown RBP16.66■□□□□ 0.26
CNOT3-204ENST00000447684 VARSP26640 1264 aaKnown RBP16.66■□□□□ 0.26
CNOT3-204ENST00000447684 RPL22P35268 128 aaKnown RBP16.66■□□□□ 0.26
CNOT3-204ENST00000447684 GPC3P51654 580 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 CCR3P51677 355 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 OTUD4Q01804 1114 aaKnown RBP16.66■□□□□ 0.26
CNOT3-204ENST00000447684 SLC18A2Q05940 514 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 C6orf52Q5T4I8 152 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 DIS3LQ8TF46 1054 aaKnown RBP16.66■□□□□ 0.26
CNOT3-204ENST00000447684 DCAF4Q8WV16 495 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 JADE3Q92613 823 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 ZFRQ96KR1 1074 aaKnown RBP16.66■□□□□ 0.26
CNOT3-204ENST00000447684 BTBD9Q96Q07 612 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 CDCA7Q9BWT1 371 aaPredicted RBP16.66■□□□□ 0.26
CNOT3-204ENST00000447684 MRPS26Q9BYN8 205 aaKnown RBP16.66■□□□□ 0.26
CNOT3-204ENST00000447684 FETUBQ9UGM5 382 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 PCDHB2Q9Y5E7 798 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 AK5Q9Y6K8 562 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 CRTAMO95727 393 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 STX3Q13277 289 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 SNAPC2Q13487 334 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 TBCCQ15814 346 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 SPOPLQ6IQ16 392 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 DCUN1D2Q6PH85 259 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 SLC44A1Q8WWI5 657 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 CSRNP1Q96S65 589 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 SENP6Q9GZR1 1112 aaPredicted RBP16.66■□□□□ 0.26
CNOT3-204ENST00000447684 APOBEC2Q9Y235 224 aaKnown RBP16.66■□□□□ 0.26
CNOT3-204ENST00000447684 DRG1Q9Y295 367 aaKnown RBP16.66■□□□□ 0.26
CNOT3-204ENST00000447684 RBBP6Q7Z6E9 1792 aaKnown RBP16.66■□□□□ 0.26
CNOT3-204ENST00000447684 CCNT2O60583 730 aaKnown RBP16.66■□□□□ 0.26
CNOT3-204ENST00000447684 TNFAIP8O95379 198 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 ITGAVP06756 1048 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 GPSM2P81274 684 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 KCTD21Q4G0X4 260 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 NAT8LQ8N9F0 302 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 FAM71DQ8N9W8 422 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 FEZF2Q8TBJ5 459 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 LRGUKQ96M69 825 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 MCEEQ96PE7 176 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 RBM38Q9H0Z9 239 aaKnown RBP16.66■□□□□ 0.26
CNOT3-204ENST00000447684 TUBGCP4Q9UGJ1 667 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 PLLPQ9Y342 182 aa16.66■□□□□ 0.26
CNOT3-204ENST00000447684 ZNF831Q5JPB2 1677 aa16.65■□□□□ 0.26
CNOT3-204ENST00000447684 BTBD19C9JJ37 291 aa16.65■□□□□ 0.26
CNOT3-204ENST00000447684 KLF11O14901 512 aa16.65■□□□□ 0.26
CNOT3-204ENST00000447684 PMM2O15305 246 aa16.65■□□□□ 0.26
CNOT3-204ENST00000447684 VIL1P09327 827 aaKnown RBP16.65■□□□□ 0.26
CNOT3-204ENST00000447684 HDAC4P56524 1084 aa16.65■□□□□ 0.26
CNOT3-204ENST00000447684 MYBPC1Q00872 1141 aa16.65■□□□□ 0.26
CNOT3-204ENST00000447684 PDK1Q15118 436 aa16.65■□□□□ 0.26
CNOT3-204ENST00000447684 TFDP3Q5H9I0 405 aa16.65■□□□□ 0.26
CNOT3-204ENST00000447684 ANKRD23Q86SG2 305 aa16.65■□□□□ 0.26
CNOT3-204ENST00000447684 MARVELD2Q8N4S9 558 aa16.65■□□□□ 0.26
CNOT3-204ENST00000447684 FNDC8Q8TC99 324 aa16.65■□□□□ 0.26
CNOT3-204ENST00000447684 DNAJC16Q9Y2G8 782 aa16.65■□□□□ 0.26
CNOT3-204ENST00000447684 CNTNAP4Q9C0A0 1308 aa16.65■□□□□ 0.26
CNOT3-204ENST00000447684 hCG_1818297A0A087WSY0 165 aa16.65■□□□□ 0.26
CNOT3-204ENST00000447684 A0A1B0GTW7 788 aa16.65■□□□□ 0.26
CNOT3-204ENST00000447684 TMEM221A6NGB7 291 aa16.65■□□□□ 0.26
CNOT3-204ENST00000447684 XPO1O14980 1071 aaKnown RBP16.65■□□□□ 0.26
CNOT3-204ENST00000447684 ARP10275 920 aa16.65■□□□□ 0.26
CNOT3-204ENST00000447684 AOC1P19801 751 aa16.65■□□□□ 0.26
CNOT3-204ENST00000447684 MLH1P40692 756 aa16.65■□□□□ 0.26
CNOT3-204ENST00000447684 STT3AP46977 705 aa16.65■□□□□ 0.26
CNOT3-204ENST00000447684 C16orf72Q14CZ0 275 aa16.65■□□□□ 0.26
CNOT3-204ENST00000447684 KCNT1Q5JUK3 1230 aa16.65■□□□□ 0.26
CNOT3-204ENST00000447684 GRAMD4Q6IC98 578 aa16.65■□□□□ 0.26
CNOT3-204ENST00000447684 DRICH1Q6PGQ1 229 aaPredicted RBP16.65■□□□□ 0.26
CNOT3-204ENST00000447684 TMEM270Q6UE05 265 aa16.65■□□□□ 0.26
CNOT3-204ENST00000447684 NCCRP1Q6ZVX7 275 aaPredicted RBP16.65■□□□□ 0.26
CNOT3-204ENST00000447684 WDR75Q8IWA0 830 aaKnown RBP16.65■□□□□ 0.26
CNOT3-204ENST00000447684 NUP93Q8N1F7 819 aa16.65■□□□□ 0.26
CNOT3-204ENST00000447684 TMEM174Q8WUU8 243 aa16.65■□□□□ 0.26
CNOT3-204ENST00000447684 MKL1Q969V6 931 aa16.65■□□□□ 0.26
CNOT3-204ENST00000447684 PCDH18Q9HCL0 1135 aa16.65■□□□□ 0.26
CNOT3-204ENST00000447684 XAB2Q9HCS7 855 aaKnown RBP16.65■□□□□ 0.26
CNOT3-204ENST00000447684 ZNF180Q9UJW8 692 aa16.65■□□□□ 0.26
CNOT3-204ENST00000447684 SDR42E2A6NKP2 422 aa16.64■□□□□ 0.25
CNOT3-204ENST00000447684 KRT37O76014 449 aa16.64■□□□□ 0.25
CNOT3-204ENST00000447684 NELFEP18615 380 aaKnown RBP16.64■□□□□ 0.25
CNOT3-204ENST00000447684 MSX2P35548 267 aaPredicted RBP16.64■□□□□ 0.25
CNOT3-204ENST00000447684 TTC39BQ5VTQ0 682 aaPredicted RBP16.64■□□□□ 0.25
CNOT3-204ENST00000447684 RTKN2Q8IZC4 609 aa16.64■□□□□ 0.25
CNOT3-204ENST00000447684 RIN3Q8TB24 985 aa16.64■□□□□ 0.25
CNOT3-204ENST00000447684 MAML3Q96JK9 1138 aa16.64■□□□□ 0.25
CNOT3-204ENST00000447684 TRIM56Q9BRZ2 755 aaKnown RBP16.64■□□□□ 0.25
CNOT3-204ENST00000447684 XPNPEP1Q9NQW7 623 aa16.64■□□□□ 0.25
CNOT3-204ENST00000447684 IP6K2Q9UHH9 426 aa16.64■□□□□ 0.25
CNOT3-204ENST00000447684 BARX2Q9UMQ3 279 aaPredicted RBP16.64■□□□□ 0.25
CNOT3-204ENST00000447684 DOLKQ9UPQ8 538 aa16.64■□□□□ 0.25
CNOT3-204ENST00000447684 SCINQ9Y6U3 715 aa16.64■□□□□ 0.25
CNOT3-204ENST00000447684 AP1G1O43747 822 aa16.64■□□□□ 0.25
CNOT3-204ENST00000447684 CST8O60676 142 aa16.64■□□□□ 0.25
CNOT3-204ENST00000447684 SF3B1O75533 1304 aaKnown RBP eCLIP16.64■□□□□ 0.252e-7■■■■■ 273.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms