RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 MTRRQ9UBK8 725 aa26.09■■□□□ 1.77
RFFL-206ENST00000447669 PCSK1NQ9UHG2 260 aa26.09■■□□□ 1.77
RFFL-206ENST00000447669 PCDHB5Q9Y5E4 795 aa26.09■■□□□ 1.77
RFFL-206ENST00000447669 FGF18O76093 207 aa26.09■■□□□ 1.77
RFFL-206ENST00000447669 IL1R2P27930 398 aa26.09■■□□□ 1.77
RFFL-206ENST00000447669 ZNF143P52747 638 aaPredicted RBP26.09■■□□□ 1.77
RFFL-206ENST00000447669 ATXN1P54253 815 aaKnown RBP26.09■■□□□ 1.77
RFFL-206ENST00000447669 PITX1P78337 314 aaPredicted RBP26.09■■□□□ 1.77
RFFL-206ENST00000447669 GPR17Q13304 367 aa26.09■■□□□ 1.77
RFFL-206ENST00000447669 KCTD19Q17RG1 926 aaPredicted RBP26.09■■□□□ 1.77
RFFL-206ENST00000447669 SLC26A9Q7LBE3 791 aa26.09■■□□□ 1.77
RFFL-206ENST00000447669 ADAT2Q7Z6V5 191 aaKnown RBP26.09■■□□□ 1.77
RFFL-206ENST00000447669 ZDHHC17Q8IUH5 632 aa26.09■■□□□ 1.77
RFFL-206ENST00000447669 UBL4BQ8N7F7 174 aa26.09■■□□□ 1.77
RFFL-206ENST00000447669 PIK3R5Q8WYR1 880 aa26.09■■□□□ 1.77
RFFL-206ENST00000447669 CALCOCO1Q9P1Z2 691 aa26.09■■□□□ 1.77
RFFL-206ENST00000447669 PLXNA4Q9HCM2 1894 aa26.08■■□□□ 1.77
RFFL-206ENST00000447669 MIF4GDA9UHW6 222 aaKnown RBP26.08■■□□□ 1.77
RFFL-206ENST00000447669 CTNNA2P26232 953 aa26.08■■□□□ 1.77
RFFL-206ENST00000447669 PGFP49763 221 aa26.08■■□□□ 1.77
RFFL-206ENST00000447669 SLC5A3P53794 718 aa26.08■■□□□ 1.77
RFFL-206ENST00000447669 ROR1Q01973 937 aa26.08■■□□□ 1.77
RFFL-206ENST00000447669 DUSP4Q13115 394 aa26.08■■□□□ 1.77
RFFL-206ENST00000447669 NFE2Q16621 373 aaPredicted RBP26.08■■□□□ 1.77
RFFL-206ENST00000447669 SMTNL2Q2TAL5 461 aa26.08■■□□□ 1.77
RFFL-206ENST00000447669 BHLHA9Q7RTU4 235 aa26.08■■□□□ 1.77
RFFL-206ENST00000447669 KLHL23Q8NBE8 558 aa26.08■■□□□ 1.77
RFFL-206ENST00000447669 PCDHB12Q9Y5F1 795 aa26.08■■□□□ 1.77
RFFL-206ENST00000447669 MAGEA10P43363 369 aaPredicted RBP26.07■■□□□ 1.76
RFFL-206ENST00000447669 DAOAP59103 153 aa26.07■■□□□ 1.76
RFFL-206ENST00000447669 C2orf54Q08AI8 447 aa26.07■■□□□ 1.76
RFFL-206ENST00000447669 KCNT1Q5JUK3 1230 aa26.07■■□□□ 1.76
RFFL-206ENST00000447669 CCDC181Q5TID7 509 aa26.07■■□□□ 1.76
RFFL-206ENST00000447669 SYPL2Q5VXT5 272 aa26.07■■□□□ 1.76
RFFL-206ENST00000447669 DDX53Q86TM3 631 aaKnown RBP26.07■■□□□ 1.76
RFFL-206ENST00000447669 DEFB106AQ8N104 65 aa26.07■■□□□ 1.76
RFFL-206ENST00000447669 NIPA2Q8N8Q9 360 aa26.07■■□□□ 1.76
RFFL-206ENST00000447669 FNIP1Q8TF40 1166 aa26.07■■□□□ 1.76
RFFL-206ENST00000447669 SLC9A7Q96T83 725 aa26.07■■□□□ 1.76
RFFL-206ENST00000447669 SEPT5Q99719 369 aaPredicted RBP26.07■■□□□ 1.76
RFFL-206ENST00000447669 ZWILCHQ9H900 591 aa26.07■■□□□ 1.76
RFFL-206ENST00000447669 MTUS1Q9ULD2 1270 aa26.07■■□□□ 1.76
RFFL-206ENST00000447669 PATJQ8NI35 1801 aa26.07■■□□□ 1.76
RFFL-206ENST00000447669 CCDC66A2RUB6 948 aa26.07■■□□□ 1.76
RFFL-206ENST00000447669 TNFRSF10BO14763 440 aa26.07■■□□□ 1.76
RFFL-206ENST00000447669 ZBED1O96006 694 aa26.07■■□□□ 1.76
RFFL-206ENST00000447669 GLUD2P49448 558 aa26.07■■□□□ 1.76
RFFL-206ENST00000447669 DSG1Q02413 1049 aa26.07■■□□□ 1.76
RFFL-206ENST00000447669 TUBB2AQ13885 445 aa26.07■■□□□ 1.76
RFFL-206ENST00000447669 MGAT5BQ3V5L5 792 aa26.07■■□□□ 1.76
RFFL-206ENST00000447669 ANKS1BQ7Z6G8 1248 aa26.07■■□□□ 1.76
RFFL-206ENST00000447669 PBKQ96KB5 322 aa26.07■■□□□ 1.76
RFFL-206ENST00000447669 TUBB2BQ9BVA1 445 aa26.07■■□□□ 1.76
RFFL-206ENST00000447669 NAALADL1Q9UQQ1 740 aa26.07■■□□□ 1.76
RFFL-206ENST00000447669 FYNP06241 537 aa26.06■■□□□ 1.76
RFFL-206ENST00000447669 MAN1A1P33908 653 aa26.06■■□□□ 1.76
RFFL-206ENST00000447669 CA8P35219 290 aa26.06■■□□□ 1.76
RFFL-206ENST00000447669 SHHQ15465 462 aa26.06■■□□□ 1.76
RFFL-206ENST00000447669 SLC8B1Q6J4K2 584 aa26.06■■□□□ 1.76
RFFL-206ENST00000447669 CLP1Q92989 425 aaKnown RBP26.06■■□□□ 1.76
RFFL-206ENST00000447669 RNPC3Q96LT9 517 aaKnown RBP26.06■■□□□ 1.76
RFFL-206ENST00000447669 UBXN6Q9BZV1 441 aa26.06■■□□□ 1.76
RFFL-206ENST00000447669 EPC1Q9H2F5 836 aa26.06■■□□□ 1.76
RFFL-206ENST00000447669 ALG13Q9NP73 1137 aaKnown RBP26.06■■□□□ 1.76
RFFL-206ENST00000447669 PI4K2BG5E9Z4 385 aa26.05■■□□□ 1.76
RFFL-206ENST00000447669 MIPP30301 263 aa26.05■■□□□ 1.76
RFFL-206ENST00000447669 USP46P62068 366 aa26.05■■□□□ 1.76
RFFL-206ENST00000447669 DCAF6Q58WW2 860 aa26.05■■□□□ 1.76
RFFL-206ENST00000447669 RHOT1Q8IXI2 618 aa26.05■■□□□ 1.76
RFFL-206ENST00000447669 NOA1Q8NC60 698 aaKnown RBP26.05■■□□□ 1.76
RFFL-206ENST00000447669 EDEM1Q92611 657 aa26.05■■□□□ 1.76
RFFL-206ENST00000447669 FUBP3Q96I24 572 aaKnown RBP eCLIP26.05■■□□□ 1.76
RFFL-206ENST00000447669 PEBP4Q96S96 227 aa26.05■■□□□ 1.76
RFFL-206ENST00000447669 CNPY3Q9BT09 278 aa26.05■■□□□ 1.76
RFFL-206ENST00000447669 HERC2P3Q9BVR0 1158 aa26.05■■□□□ 1.76
RFFL-206ENST00000447669 NGRNQ9NPE2 291 aaKnown RBP26.05■■□□□ 1.76
RFFL-206ENST00000447669 MYO7AQ13402 2215 aa26.05■■□□□ 1.76
RFFL-206ENST00000447669 SDC4P31431 198 aa26.05■■□□□ 1.76
RFFL-206ENST00000447669 RWDD2BP57060 319 aa26.05■■□□□ 1.76
RFFL-206ENST00000447669 YWHAZP63104 245 aaKnown RBP26.05■■□□□ 1.76
RFFL-206ENST00000447669 MTMR3Q13615 1198 aa26.05■■□□□ 1.76
RFFL-206ENST00000447669 EFHC1Q5JVL4 640 aa26.05■■□□□ 1.76
RFFL-206ENST00000447669 RASIP1Q5U651 963 aa26.05■■□□□ 1.76
RFFL-206ENST00000447669 FAM172AQ8WUF8 416 aa26.05■■□□□ 1.76
RFFL-206ENST00000447669 AP1M1Q9BXS5 423 aa26.05■■□□□ 1.76
RFFL-206ENST00000447669 CNGB3Q9NQW8 809 aa26.05■■□□□ 1.76
RFFL-206ENST00000447669 AAASQ9NRG9 546 aa26.05■■□□□ 1.76
RFFL-206ENST00000447669 NR2E1Q9Y466 385 aa26.05■■□□□ 1.76
RFFL-206ENST00000447669 UQCRHLA0A096LP55 91 aa26.04■■□□□ 1.76
RFFL-206ENST00000447669 TADA3O75528 432 aa26.04■■□□□ 1.76
RFFL-206ENST00000447669 FGGP02679 453 aa26.04■■□□□ 1.76
RFFL-206ENST00000447669 UQCRHP07919 91 aa26.04■■□□□ 1.76
RFFL-206ENST00000447669 MRPS25P82663 173 aaKnown RBP26.04■■□□□ 1.76
RFFL-206ENST00000447669 SLC25A11Q02978 314 aaKnown RBP26.04■■□□□ 1.76
RFFL-206ENST00000447669 ZFYVE27Q5T4F4 411 aa26.04■■□□□ 1.76
RFFL-206ENST00000447669 CEP112Q8N8E3 955 aa26.04■■□□□ 1.76
RFFL-206ENST00000447669 ADAM32Q8TC27 787 aa26.04■■□□□ 1.76
RFFL-206ENST00000447669 SP7Q8TDD2 431 aaPredicted RBP26.04■■□□□ 1.76
RFFL-206ENST00000447669 HERPUD2Q9BSE4 406 aa26.04■■□□□ 1.76
RFFL-206ENST00000447669 C17orf80Q9BSJ5 609 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms