RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 MAP2K6P52564 334 aa1.36□□□□□ -2.19
SNHG3-203ENST00000447507 COPB1P53618 953 aaKnown RBP1.36□□□□□ -2.19
SNHG3-203ENST00000447507 PRKAG1P54619 331 aa1.36□□□□□ -2.19
SNHG3-203ENST00000447507 WNT3P56703 355 aa1.36□□□□□ -2.19
SNHG3-203ENST00000447507 SOX8P57073 446 aa1.36□□□□□ -2.19
SNHG3-203ENST00000447507 HSF1Q00613 529 aa1.36□□□□□ -2.19
SNHG3-203ENST00000447507 PCBP2Q15366 365 aaKnown RBP eCLIP1.36□□□□□ -2.19
SNHG3-203ENST00000447507 LY6KQ17RY6 165 aa1.36□□□□□ -2.19
SNHG3-203ENST00000447507 ZNF750Q32MQ0 723 aa1.36□□□□□ -2.19
SNHG3-203ENST00000447507 DGKKQ5KSL6 1271 aa1.36□□□□□ -2.19
SNHG3-203ENST00000447507 C9orf50Q5SZB4 431 aa1.36□□□□□ -2.19
SNHG3-203ENST00000447507 CC2D1BQ5T0F9 858 aaKnown RBP1.36□□□□□ -2.19
SNHG3-203ENST00000447507 CERCAMQ5T4B2 595 aa1.36□□□□□ -2.19
SNHG3-203ENST00000447507 GFI1BQ5VTD9 330 aa1.36□□□□□ -2.19
SNHG3-203ENST00000447507 RANBP10Q6VN20 620 aa1.36□□□□□ -2.19
SNHG3-203ENST00000447507 PTCHD4Q6ZW05 846 aa1.36□□□□□ -2.19
SNHG3-203ENST00000447507 FOXP4Q8IVH2 680 aaPredicted RBP1.36□□□□□ -2.19
SNHG3-203ENST00000447507 C16orf71Q8IYS4 520 aaPredicted RBP1.36□□□□□ -2.19
SNHG3-203ENST00000447507 LINC01465Q8N7H1 131 aa1.36□□□□□ -2.19
SNHG3-203ENST00000447507 MAFAQ8NHW3 353 aaPredicted RBP1.36□□□□□ -2.19
SNHG3-203ENST00000447507 B4GALNT2Q8NHY0 566 aa1.36□□□□□ -2.19
SNHG3-203ENST00000447507 TMEM171Q8WVE6 324 aa1.36□□□□□ -2.19
SNHG3-203ENST00000447507 NR4A3Q92570 626 aa1.36□□□□□ -2.19
SNHG3-203ENST00000447507 WBP1Q96G27 269 aa1.36□□□□□ -2.19
SNHG3-203ENST00000447507 ZNF479Q96JC4 524 aa1.36□□□□□ -2.19
SNHG3-203ENST00000447507 FAM84BQ96KN1 310 aaPredicted RBP1.36□□□□□ -2.19
SNHG3-203ENST00000447507 HS6ST2Q96MM7 605 aa1.36□□□□□ -2.19
SNHG3-203ENST00000447507 MEIS3Q99687 375 aa1.36□□□□□ -2.19
SNHG3-203ENST00000447507 FAM126AQ9BYI3 521 aaPredicted RBP1.36□□□□□ -2.19
SNHG3-203ENST00000447507 MLXIPQ9HAP2 919 aa1.36□□□□□ -2.19
SNHG3-203ENST00000447507 SEMA4BQ9NPR2 832 aaPredicted RBP1.36□□□□□ -2.19
SNHG3-203ENST00000447507 PNPOQ9NVS9 261 aa1.36□□□□□ -2.19
SNHG3-203ENST00000447507 XPR1Q9UBH6 696 aa1.36□□□□□ -2.19
SNHG3-203ENST00000447507 TMX2Q9Y320 296 aa1.36□□□□□ -2.19
SNHG3-203ENST00000447507 PRSS47A8MTI9 375 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 H3BUI4 141 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 MYO1CO00159 1063 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 GABRDO14764 452 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 INPPL1O15357 1258 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 TMPRSS11DO60235 418 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 GAS8-AS1O95177 125 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 ZRANB2O95218 330 aaKnown RBP eCLIP1.35□□□□□ -2.19
SNHG3-203ENST00000447507 IGKV3-20P01619 116 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 PLA2G2AP14555 144 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 TACR3P29371 465 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 IL6STP40189 918 aaPredicted RBP1.35□□□□□ -2.19
SNHG3-203ENST00000447507 CPA2P48052 419 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 SLC11A2P49281 568 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 MTHFSP49914 203 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 PGGT1BP53609 377 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 UCP3P55916 312 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 YPEL5P62699 121 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 NKX6-1P78426 367 aaPredicted RBP1.35□□□□□ -2.19
SNHG3-203ENST00000447507 B4GALNT1Q00973 533 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 PLS1Q14651 629 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 PRTGQ2VWP7 1150 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 ZIK1Q3SY52 487 aaPredicted RBP1.35□□□□□ -2.19
SNHG3-203ENST00000447507 CCDC157Q569K6 752 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 KHDC1LQ5JSQ8 128 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 MANEAQ5SRI9 462 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 ZNF324BQ6AW86 544 aaPredicted RBP1.35□□□□□ -2.19
SNHG3-203ENST00000447507 CAPRIN2Q6IMN6 1127 aaKnown RBP1.35□□□□□ -2.19
SNHG3-203ENST00000447507 SDE2Q6IQ49 451 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 PDXDC1Q6P996 788 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 RFX8Q6ZV50 586 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 B4GALNT4Q76KP1 1039 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 UBE2Q1Q7Z7E8 422 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 GAS2L3Q86XJ1 694 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 DDX42Q86XP3 938 aaKnown RBP eCLIP1.35□□□□□ -2.19
SNHG3-203ENST00000447507 ZNF280BQ86YH2 543 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 RAB11FIP4Q86YS3 637 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 RFX6Q8HWS3 928 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 BPIFB1Q8TDL5 484 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 IGFBPL1Q8WX77 278 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 ATP2A3Q93084 1043 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 SLC25A28Q96A46 364 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 MTFMTQ96DP5 389 aaKnown RBP1.35□□□□□ -2.19
SNHG3-203ENST00000447507 MTMR8Q96EF0 704 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 SLC35A4Q96G79 324 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 HIC2Q96JB3 615 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 MESP1Q9BRJ9 268 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 C17orf80Q9BSJ5 609 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 SLC13A1Q9BZW2 595 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 TMX1Q9H3N1 280 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 TMEM8AQ9HCN3 771 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 SARS2Q9NP81 518 aaKnown RBP1.35□□□□□ -2.19
SNHG3-203ENST00000447507 CNNM1Q9NRU3 951 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 GJB4Q9NTQ9 266 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 GAR1Q9NY12 217 aaKnown RBP1.35□□□□□ -2.19
SNHG3-203ENST00000447507 LPAR3Q9UBY5 353 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 DRG1Q9Y295 367 aaKnown RBP1.35□□□□□ -2.19
SNHG3-203ENST00000447507 TMA7Q9Y2S6 64 aaKnown RBP1.35□□□□□ -2.19
SNHG3-203ENST00000447507 MED16Q9Y2X0 877 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 PRKAB1Q9Y478 270 aa1.35□□□□□ -2.19
SNHG3-203ENST00000447507 A0A087WWL8 130 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 TLDC2A0PJX2 215 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 IFITM10A6NMD0 228 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 ACOT8O14734 319 aa1.34□□□□□ -2.19
SNHG3-203ENST00000447507 CTIFO43310 598 aaKnown RBP1.34□□□□□ -2.19
SNHG3-203ENST00000447507 CLSTN1O94985 981 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms