RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	RGS9BP	Q6ZS82	235 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	KATNAL2	Q8IYT4	538 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	RCOR2	Q8IZ40	523 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	ATP11C	Q8NB49	1132 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	IWS1	Q96ST2	819 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	KCND2	Q9NZV8	630 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	SEPT10	Q9P0V9	454 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	WDR35	Q9P2L0	1181 aa		13.07	□□□□□ -0.32
DDR1-238	ENST00000446312	PRR5-ARHGAP8	B1AHC4	643 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	SUPT3H	O75486	399 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	DGKI	O75912	1065 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	CYP1A1	P04798	512 aa	Predicted RBP	13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	NCF2	P19878	526 aa	Predicted RBP	13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	CDKN2B	P42772	138 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	ARHGAP8	P85298	464 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	CAV1	Q03135	178 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	BTK	Q06187	659 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	BST1	Q10588	318 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	MKRN3	Q13064	507 aa	Known RBP	13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	NFIL3	Q16649	462 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	FAM102A	Q5T9C2	384 aa	Predicted RBP	13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	OR6B2	Q6IFH4	312 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	LRRC74B	Q6ZQY2	392 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	DENND5B	Q6ZUT9	1274 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	C4orf19	Q8IY42	314 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	ARFGAP1	Q8N6T3	406 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	SLC26A7	Q8TE54	656 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	SNRNP27	Q8WVK2	155 aa	Known RBP	13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	C20orf27	Q9GZN8	174 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	JPH1	Q9HDC5	661 aa	Predicted RBP	13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	TBC1D22B	Q9NU19	505 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	TMEM191C	A6NGB0	347 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	EXTL3	O43909	919 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	TMEM191B	P0C7N4	346 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	FAM200B	P0CF97	657 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	CD1E	P15812	388 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	FUT4	P22083	530 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	HSPA1L	P34931	641 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	GCNT1	Q02742	428 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	CES4A	Q5XG92	561 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	NLGN1	Q8N2Q7	840 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	MPP5	Q8N3R9	675 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	WDTC1	Q8N5D0	677 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	TEX9	Q8N6V9	391 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	BBOF1	Q8ND07	529 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	RBM15B	Q8NDT2	890 aa	Known RBP	13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	SRPK1	Q96SB4	655 aa	Known RBP	13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	CPXM1	Q96SM3	734 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	BTBD10	Q9BSF8	475 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	VCX	Q9H320	206 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	PAIP2B	Q9ULR5	123 aa	Known RBP	13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	UBR3	Q6ZT12	1888 aa		13.06	□□□□□ -0.32
DDR1-238	ENST00000446312	ALOX15B	O15296	676 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	PSTPIP1	O43586	416 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	SESN2	P58004	480 aa	Predicted RBP	13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	CCDC92	Q53HC0	331 aa	Predicted RBP	13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	C12orf29	Q8N999	325 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	RNF149	Q8NC42	400 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	PPFIBP2	Q8ND30	876 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	ADAM32	Q8TC27	787 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	GRAMD1A	Q96CP6	724 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	NDN	Q99608	321 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	OCEL1	Q9H607	264 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	FAM49B	Q9NUQ9	324 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	ZNRF3	Q9ULT6	936 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	LIN7A	O14910	233 aa	Predicted RBP	13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	LRCH4	O75427	683 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	RGS20	O76081	388 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	PSMG1	O95456	288 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	C6orf222	P0C671	652 aa	Predicted RBP	13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	ATP6V1C1	P21283	382 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	ZNF699	Q32M78	642 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	NDUFAF2	Q8N183	169 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	TTC16	Q8NEE8	873 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	ZFAND2B	Q8WV99	257 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	TWNK	Q96RR1	684 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	R3HDML	Q9H3Y0	253 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	ZNF358	Q9NW07	568 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	STOML1	Q9UBI4	398 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	PPM1H	Q9ULR3	514 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	SMG5	Q9UPR3	1016 aa	Known RBP	13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	CCDC22	O60826	627 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	ENTPD3	O75355	529 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	MIP	P30301	263 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	SERPINB6	P35237	376 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	ZNF200	P98182	395 aa	Predicted RBP	13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	PLEKHA7	Q6IQ23	1121 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	C7orf31	Q8N865	590 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	TMEM35B	Q8NCS4	154 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	FAM81B	Q96LP2	452 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	GBP5	Q96PP8	586 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	PHF12	Q96QT6	1004 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	LNPEP	Q9UIQ6	1025 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	COQ4	Q9Y3A0	265 aa		13.05	□□□□□ -0.32
DDR1-238	ENST00000446312	SCN9A	Q15858	1988 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	GOLGA8T	H3BQL2	631 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312		M0QYV0	167 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	MAP3K7	O43318	606 aa		13.04	□□□□□ -0.32
DDR1-238	ENST00000446312	HCRT	O43612	131 aa		13.04	□□□□□ -0.32

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