RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 WBP11Q9Y2W2 641 aaKnown RBP8.15□□□□□ -1.11
SMG1-202ENST00000446231 BIRC5O15392 142 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 RUNX1T1Q06455 604 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 GIT2Q14161 759 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 QRICH1Q2TAL8 776 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 SH3D19Q5HYK7 790 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 RNF19BQ6ZMZ0 732 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 TAS2R42Q7RTR8 314 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 POLR1BQ9H9Y6 1135 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 ANKARQ7Z5J8 1434 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 POLR2EP19388 210 aaKnown RBP8.14□□□□□ -1.11
SMG1-202ENST00000446231 ACTR3P61158 418 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 BBS2Q9BXC9 721 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 RAB26Q9ULW5 256 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 IRF2BP2Q7Z5L9 587 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 ADCY4Q8NFM4 1077 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 VPS45Q9NRW7 570 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 A0A1B0GW55 424 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 TRIM64CA6NLI5 447 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 TM7SF2O76062 418 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 DUX4L2P0CJ85 424 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 DUX4L3P0CJ86 424 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 DUX4L4P0CJ87 422 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 DUX4L5P0CJ88 424 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 DUX4L6P0CJ89 424 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 DUX4L7P0CJ90 424 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 TTKP33981 857 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 PEX3P56589 373 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 HLFQ16534 295 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 TAF2Q6P1X5 1199 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 RINLQ6ZS11 566 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 GSTCDQ8NEC7 633 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 PI4K2AQ9BTU6 479 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 DUX4Q9UBX2 424 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 BTBD3Q9Y2F9 522 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 PEX2P28328 305 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 SPRP35270 261 aaPredicted RBP8.14□□□□□ -1.11
SMG1-202ENST00000446231 TCF12Q99081 682 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 SNAP23O00161 211 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 EDF1O60869 148 aaKnown RBP8.14□□□□□ -1.11
SMG1-202ENST00000446231 IL6STP40189 918 aaPredicted RBP8.14□□□□□ -1.11
SMG1-202ENST00000446231 ZC2HC1CQ53FD0 456 aaPredicted RBP8.14□□□□□ -1.11
SMG1-202ENST00000446231 AMIGO2Q86SJ2 522 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 SEPT12Q8IYM1 358 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 OLFM1Q99784 485 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 SRP72O76094 671 aaKnown RBP8.14□□□□□ -1.11
SMG1-202ENST00000446231 GLRA2P23416 452 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 RSAD1Q9HA92 442 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 SLC8A2Q9UPR5 921 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 MYH6P13533 1939 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 ITPRIPL1Q6GPH6 555 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 SLC47A2Q86VL8 602 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 FAM149B1Q96BN6 582 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 LRRC19Q9H756 370 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.14□□□□□ -1.11
SMG1-202ENST00000446231 CLEC11AQ9Y240 323 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 GVINP1Q7Z2Y8 2422 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 AREL1O15033 823 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 SMTNL2Q2TAL5 461 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 LPCAT4Q643R3 524 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 FAM162AQ96A26 154 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 RRM1P23921 792 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 RPL26P61254 145 aaKnown RBP8.14□□□□□ -1.11
SMG1-202ENST00000446231 BST1Q10588 318 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 MYBPC3Q14896 1274 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 CDO1Q16878 200 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 NCCRP1Q6ZVX7 275 aaPredicted RBP8.14□□□□□ -1.11
SMG1-202ENST00000446231 RPTORQ8N122 1335 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 HSMCR30P0CW71 290 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 LTKP29376 864 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 RAB15P59190 212 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 CDC16Q13042 620 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 ZNF846Q147U1 533 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 SPANXN2Q5MJ10 180 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 ISCA1Q9BUE6 129 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 PRR5-ARHGAP8B1AHC4 643 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 RGL2O15211 777 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 TBX10O75333 385 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 ARHGAP8P85298 464 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 ABRAXAS1Q6UWZ7 409 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 TRABD2AQ86V40 505 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 OR8H2Q8N162 312 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 PQLC1Q8N2U9 271 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 PDPRQ8NCN5 879 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 RORBQ92753 470 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 HMG20AQ9NP66 347 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 ABCB10Q9NRK6 738 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 COX4I1P13073 169 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 RPL14P50914 215 aaKnown RBP8.14□□□□□ -1.11
SMG1-202ENST00000446231 HIRAP54198 1017 aaPredicted RBP8.14□□□□□ -1.11
SMG1-202ENST00000446231 DGKDQ16760 1214 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 TRAPPC3LQ5T215 181 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 CYP4X1Q8N118 509 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 RASSF5Q8WWW0 418 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 LXNQ9BS40 222 aa8.14□□□□□ -1.11
SMG1-202ENST00000446231 H6PDO95479 791 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 RALBP11234 206 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 NELFEP18615 380 aaKnown RBP8.13□□□□□ -1.11
SMG1-202ENST00000446231 HADHAP40939 763 aa8.13□□□□□ -1.11
SMG1-202ENST00000446231 SNRPFP62306 86 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms