RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 RMND5AQ9H871 391 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 MYL4P12829 197 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 MSH3P20585 1137 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 FGFR2P21802 821 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 MYBPC2Q14324 1141 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 CCDC157Q569K6 752 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 C4orf19Q8IY42 314 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 TMEM237Q96Q45 408 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 TAAR1Q96RJ0 339 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 TRABDQ9H4I3 376 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 DNPEPQ9ULA0 475 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 RIC1Q4ADV7 1423 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 GALCP54803 685 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 KCNK10P57789 538 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 BST2Q10589 180 aaKnown RBP12.12□□□□□ -0.47
FN1-212ENST00000446046 RGS9BPQ6ZS82 235 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 FAM162AQ96A26 154 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 DMAP1Q9NPF5 467 aaPredicted RBP12.12□□□□□ -0.47
FN1-212ENST00000446046 TRAV19A0A0A6YYK7 116 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 PFDN1O60925 122 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 CCDC60Q8IWA6 550 aaPredicted RBP12.12□□□□□ -0.47
FN1-212ENST00000446046 SGSM3Q96HU1 749 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 MRPL17Q9NRX2 175 aaKnown RBP12.12□□□□□ -0.47
FN1-212ENST00000446046 CACNA2D2Q9NY47 1150 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 BARX2Q9UMQ3 279 aaPredicted RBP12.12□□□□□ -0.47
FN1-212ENST00000446046 TRPV2Q9Y5S1 764 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 FAM205AQ6ZU69 1335 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 ADCY6O43306 1168 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 ACO1P21399 889 aaKnown RBP12.12□□□□□ -0.47
FN1-212ENST00000446046 SP3Q02447 781 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 PLEKHM3Q6ZWE6 761 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 CLYBLQ8N0X4 340 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 USP38Q8NB14 1042 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 CNPY3Q9BT09 278 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 TK2O00142 265 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 NDUFB5O43674 189 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 AGTP01019 485 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 TRIP4Q15650 581 aaPredicted RBP12.12□□□□□ -0.47
FN1-212ENST00000446046 UBA3Q8TBC4 463 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 BLOC1S5Q8TDH9 187 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 PYCARDQ9ULZ3 195 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 USP18Q9UMW8 372 aa12.12□□□□□ -0.47
FN1-212ENST00000446046 NUP98P52948 1817 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 EPB42P16452 691 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 CHI3L1P36222 383 aaPredicted RBP12.11□□□□□ -0.47
FN1-212ENST00000446046 RETSATQ6NUM9 610 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 SPATA4Q8NEY3 305 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 WDR48Q8TAF3 677 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 ROPN1BQ9BZX4 212 aaPredicted RBP12.11□□□□□ -0.47
FN1-212ENST00000446046 SENP6Q9GZR1 1112 aaPredicted RBP12.11□□□□□ -0.47
FN1-212ENST00000446046 ROPN1Q9HAT0 212 aaPredicted RBP12.11□□□□□ -0.47
FN1-212ENST00000446046 SNX12Q9UMY4 172 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 A0A087WWV3 80 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 PMPCBO75439 489 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 MTA2O94776 668 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 CYP11B1P15538 503 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 POLR2EP19388 210 aaKnown RBP12.11□□□□□ -0.47
FN1-212ENST00000446046 GTF2E2P29084 291 aaKnown RBP12.11□□□□□ -0.47
FN1-212ENST00000446046 CYP4Z1Q86W10 505 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 LZTR1Q8N653 840 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 REPS1Q96D71 796 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 MSH4O15457 936 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 CASP1P29466 404 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 NPY2RP49146 381 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 PSEN1P49768 467 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 CCNG1P51959 295 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 C11orf96Q7Z7L8 435 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 ADSSL1Q8N142 457 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 SLC25A41Q8N5S1 370 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 SDK1Q7Z5N4 2213 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 UQCRBP14927 111 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 ACVR2BQ13705 512 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 DEFB115Q30KQ5 88 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 ZNF655Q8N720 491 aaPredicted RBP12.11□□□□□ -0.47
FN1-212ENST00000446046 SERPINB11Q96P15 392 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 ECSITQ9BQ95 431 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 CEMIPQ8WUJ3 1361 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 SF3B1O75533 1304 aaKnown RBP eCLIP12.11□□□□□ -0.478e-6■■■■■ 107
FN1-212ENST00000446046 PLSCR1O15162 318 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 SRP72O76094 671 aaKnown RBP12.11□□□□□ -0.47
FN1-212ENST00000446046 POMCP01189 267 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 CYP2A7P20853 494 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 FAM171A1Q5VUB5 890 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 C16orf87Q6PH81 154 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 ZFYVE19Q96K21 471 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 KCNK16Q96T55 309 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 KANSL1LA0AUZ9 987 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 IFNA14P01570 189 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 VIL1P09327 827 aaKnown RBP12.11□□□□□ -0.47
FN1-212ENST00000446046 GPC1P35052 558 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 PSEN2P49810 448 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 SERPINB8P50452 374 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 SLC22A9Q8IVM8 553 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 ZNF333Q96JL9 665 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 ASCC2Q9H1I8 757 aaPredicted RBP12.11□□□□□ -0.47
FN1-212ENST00000446046 AURKCQ9UQB9 309 aa12.11□□□□□ -0.47
FN1-212ENST00000446046 COL5A2P05997 1499 aaPredicted RBP12.1□□□□□ -0.47
FN1-212ENST00000446046 RPTORQ8N122 1335 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 MGAT4DA6NG13 374 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 CD2BP2O95400 341 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms