RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 COPS2P61201 443 aa17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 CRHR2Q13324 411 aa17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 SPDYCQ5MJ68 293 aa17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 FNBP1LQ5T0N5 605 aa17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 OLFML1Q6UWY5 402 aa17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 BBS12Q6ZW61 710 aa17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 LRRC34Q8IZ02 419 aa17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 MICALL1Q8N3F8 863 aa17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 KBTBD7Q8WVZ9 684 aa17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 P3H4Q92791 437 aa17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 WNT8BQ93098 351 aa17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 THOC1Q96FV9 657 aaKnown RBP17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 DDX20Q9UHI6 824 aaKnown RBP17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 LAMA2P24043 3122 aaKnown RBP17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 I3L4J1 428 aa17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 AVILO75366 819 aa17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 MLH1P40692 756 aa17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 CAV1Q03135 178 aa17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 C4orf33Q8N1A6 199 aa17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 BBOF1Q8ND07 529 aa17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 APPL2Q8NEU8 664 aa17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 SNRNP25Q9BV90 132 aaKnown RBP17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 MBLAC1A4D2B0 266 aaPredicted RBP17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 MPP2Q14168 576 aa17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 DPYSL3Q14195 570 aa17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 UBXN11Q5T124 520 aa17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 RNASEH2BQ5TBB1 312 aaKnown RBP17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 FAM131BQ86XD5 332 aa17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 FNIP1Q8TF40 1166 aa17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 HASPINQ8TF76 798 aa17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 CPT1BQ92523 772 aa17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 SLC24A3Q9HC58 644 aa17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 MRPL42Q9Y6G3 142 aaKnown RBP17.56■□□□□ 0.4
LAPTM4B-201ENST00000445593 MKI67P46013 3256 aaKnown RBP17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 TMEM63AO94886 807 aa17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 KRT15P19012 456 aa17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 PITX1P78337 314 aaPredicted RBP17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 HIF1AQ16665 826 aa17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 CYP4V2Q6ZWL3 525 aaPredicted RBP17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 TAOK1Q7L7X3 1001 aa17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 PYROXD2Q8N2H3 581 aa17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 NKD2Q969F2 451 aaPredicted RBP17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 GAD1Q99259 594 aa17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 FAM129AQ9BZQ8 928 aa17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 CNOT10Q9H9A5 744 aaKnown RBP17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 MFHAS1Q9Y4C4 1052 aa17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 A6NNZ2 444 aa17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 RASA4BC9J798 803 aa17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 KCNN4O15554 427 aa17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 RASA4O43374 803 aa17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 HUS1O60921 280 aa17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 ITGAVP06756 1048 aa17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 GABRB2P47870 512 aa17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 SLC6A3Q01959 620 aa17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 ZBTB6Q15916 424 aa17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 TUBB8Q3ZCM7 444 aa17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 ERMARDQ5T6L9 678 aa17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 EMC10Q5UCC4 262 aa17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 WSCD1Q658N2 575 aa17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 APBB1IPQ7Z5R6 666 aaPredicted RBP17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 FAM228AQ86W67 206 aa17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 OSTM1Q86WC4 334 aa17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 ADGRF2Q8IZF7 708 aa17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 SMG8Q8ND04 991 aaKnown RBP17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 ADAM32Q8TC27 787 aa17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 ATXN2LQ8WWM7 1075 aaKnown RBP17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 PRCCQ92733 491 aaPredicted RBP17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 CHMP6Q96FZ7 201 aa17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 CABS1Q96KC9 395 aa17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 KLF6Q99612 283 aaPredicted RBP17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 ELAC2Q9BQ52 826 aaKnown RBP17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 PCDH9Q9HC56 1237 aa17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 CHMP2BQ9UQN3 213 aa17.55■□□□□ 0.4
LAPTM4B-201ENST00000445593 RGS2P41220 211 aa17.54■□□□□ 0.4
LAPTM4B-201ENST00000445593 NDUFV1P49821 464 aa17.54■□□□□ 0.4
LAPTM4B-201ENST00000445593 OTUD6BQ8N6M0 293 aa17.54■□□□□ 0.4
LAPTM4B-201ENST00000445593 CMASQ8NFW8 434 aaPredicted RBP17.54■□□□□ 0.4
LAPTM4B-201ENST00000445593 SLC35F5Q8WV83 523 aa17.54■□□□□ 0.4
LAPTM4B-201ENST00000445593 MED10Q9BTT4 135 aa17.54■□□□□ 0.4
LAPTM4B-201ENST00000445593 PLEKHA5Q9HAU0 1116 aa17.54■□□□□ 0.4
LAPTM4B-201ENST00000445593 XPO7Q9UIA9 1087 aaKnown RBP17.54■□□□□ 0.4
LAPTM4B-201ENST00000445593 CASTOR2A6NHX0 329 aa17.54■□□□□ 0.4
LAPTM4B-201ENST00000445593 BEST1O76090 585 aa17.54■□□□□ 0.4
LAPTM4B-201ENST00000445593 TAF6P49848 677 aa17.54■□□□□ 0.4
LAPTM4B-201ENST00000445593 SATB1Q01826 763 aa17.54■□□□□ 0.4
LAPTM4B-201ENST00000445593 ROR1Q01973 937 aa17.54■□□□□ 0.4
LAPTM4B-201ENST00000445593 TRPV1Q8NER1 839 aa17.54■□□□□ 0.4
LAPTM4B-201ENST00000445593 SEC16BQ96JE7 1060 aa17.54■□□□□ 0.4
LAPTM4B-201ENST00000445593 CNTN3Q9P232 1028 aa17.54■□□□□ 0.4
LAPTM4B-201ENST00000445593 CDY2AQ9Y6F7 541 aa17.54■□□□□ 0.4
LAPTM4B-201ENST00000445593 GOLGA8RI6L899 631 aa17.54■□□□□ 0.4
LAPTM4B-201ENST00000445593 HDAC4P56524 1084 aa17.54■□□□□ 0.4
LAPTM4B-201ENST00000445593 BCAR1P56945 870 aa17.54■□□□□ 0.4
LAPTM4B-201ENST00000445593 PURAQ00577 322 aaKnown RBP17.54■□□□□ 0.4
LAPTM4B-201ENST00000445593 ADIGQ0VDE8 80 aa17.54■□□□□ 0.4
LAPTM4B-201ENST00000445593 CENPUQ71F23 418 aa17.54■□□□□ 0.4
LAPTM4B-201ENST00000445593 KHSRPQ92945 711 aaKnown RBP eCLIP17.54■□□□□ 0.45e-8■■■■□ 25
LAPTM4B-201ENST00000445593 CCDC77Q9BR77 488 aa17.54■□□□□ 0.4
LAPTM4B-201ENST00000445593 STMN4Q9H169 189 aaPredicted RBP17.54■□□□□ 0.4
LAPTM4B-201ENST00000445593 GABRQQ9UN88 632 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms