RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 ADAT2Q7Z6V5 191 aaKnown RBP6.95□□□□□ -1.3
BRAFP1-201ENST00000445336 APLFQ8IW19 511 aaPredicted RBP6.95□□□□□ -1.3
BRAFP1-201ENST00000445336 ZNF808Q8N4W9 903 aaPredicted RBP6.95□□□□□ -1.3
BRAFP1-201ENST00000445336 RHPN1Q8TCX5 695 aa6.95□□□□□ -1.3
BRAFP1-201ENST00000445336 TMEM74Q96NL1 305 aa6.95□□□□□ -1.3
BRAFP1-201ENST00000445336 BARD1Q99728 777 aaKnown RBP6.95□□□□□ -1.3
BRAFP1-201ENST00000445336 ARHGEF4Q9NR80 690 aa6.95□□□□□ -1.3
BRAFP1-201ENST00000445336 PCDHGA3Q9Y5H0 932 aa6.95□□□□□ -1.3
BRAFP1-201ENST00000445336 RTTNQ86VV8 2226 aa6.95□□□□□ -1.3
BRAFP1-201ENST00000445336 CROCCQ5TZA2 2017 aa6.95□□□□□ -1.3
BRAFP1-201ENST00000445336 PLXNA2O75051 1894 aa6.95□□□□□ -1.3
BRAFP1-201ENST00000445336 BTBD18B2RXH4 712 aa6.95□□□□□ -1.3
BRAFP1-201ENST00000445336 IL4RP24394 825 aa6.95□□□□□ -1.3
BRAFP1-201ENST00000445336 SFNP31947 248 aa6.95□□□□□ -1.3
BRAFP1-201ENST00000445336 STARD3Q14849 445 aa6.95□□□□□ -1.3
BRAFP1-201ENST00000445336 EIF2S3LQ2VIR3 472 aaKnown RBP6.95□□□□□ -1.3
BRAFP1-201ENST00000445336 CEP55Q53EZ4 464 aa6.95□□□□□ -1.3
BRAFP1-201ENST00000445336 TMEM198Q66K66 360 aa6.95□□□□□ -1.3
BRAFP1-201ENST00000445336 SWSAP1Q6NVH7 229 aa6.95□□□□□ -1.3
BRAFP1-201ENST00000445336 CD300LGQ6UXG3 332 aa6.95□□□□□ -1.3
BRAFP1-201ENST00000445336 CLEC9AQ6UXN8 241 aa6.95□□□□□ -1.3
BRAFP1-201ENST00000445336 SGMS1Q86VZ5 419 aa6.95□□□□□ -1.3
BRAFP1-201ENST00000445336 FBXO39Q8N4B4 442 aa6.95□□□□□ -1.3
BRAFP1-201ENST00000445336 TCP11Q8WWU5 503 aa6.95□□□□□ -1.3
BRAFP1-201ENST00000445336 MRPS31Q92665 395 aaKnown RBP6.95□□□□□ -1.3
BRAFP1-201ENST00000445336 TRMT2BQ96GJ1 504 aaKnown RBP6.95□□□□□ -1.3
BRAFP1-201ENST00000445336 MAP3K14Q99558 947 aa6.95□□□□□ -1.3
BRAFP1-201ENST00000445336 IFT122Q9HBG6 1241 aa6.95□□□□□ -1.3
BRAFP1-201ENST00000445336 SUCLA2Q9P2R7 463 aaPredicted RBP6.95□□□□□ -1.3
BRAFP1-201ENST00000445336 HAX1O00165 279 aa6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 KCNAB3O43448 404 aa6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 CCNE2O96020 404 aa6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 TKTP29401 623 aaKnown RBP6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 KIF5BP33176 963 aa6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 ARSDP51689 593 aa6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 COPB1P53618 953 aaKnown RBP6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 GAD2Q05329 585 aa6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 ETFBKMTQ8IXQ9 262 aa6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 ALPK1Q96QP1 1244 aa6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 CYLDQ9NQC7 956 aa6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 ZNF71Q9NQZ8 489 aaPredicted RBP6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 TBC1D14Q9P2M4 693 aa6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 SCML1Q9UN30 329 aa6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 PCDHB8Q9UN66 801 aa6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 CSNK1G3Q9Y6M4 447 aa6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 SPDYE3A6NKU9 549 aa6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 H3BM21 787 aa6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 SIGLEC6O43699 453 aa6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 RFPL1O75677 317 aa6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 ERLIN2O94905 339 aa6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 F11P03951 625 aa6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 GOLGA8HP0CJ92 632 aa6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 RPL9P32969 192 aaKnown RBP6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 QARSP47897 775 aaKnown RBP6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 TPMTP51580 245 aa6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 ITGB3BPQ13352 177 aaPredicted RBP6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 STXBP5Q5T5C0 1151 aa6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 SLC27A1Q6PCB7 646 aa6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 LRRC71Q8N4P6 559 aa6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 SIMC1Q8NDZ2 872 aa6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 TBATAQ96M53 351 aa6.94□□□□□ -1.3
BRAFP1-201ENST00000445336 KLRF2D3W0D1 207 aa6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 DKC1O60832 514 aaKnown RBP eCLIP6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 OAZ2O95190 189 aa6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 CYP17A1P05093 508 aa6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 WT1P19544 449 aaPredicted RBP6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 NLRP12P59046 1061 aa6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 XKR3Q5GH77 459 aa6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 APBB1IPQ7Z5R6 666 aaPredicted RBP6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 CHTF18Q8WVB6 975 aa6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 NDRG1Q92597 394 aaKnown RBP6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 NAT6Q93015 286 aa6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 HVCN1Q96D96 273 aa6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 ZMYND19Q96E35 227 aaPredicted RBP6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 FEM1CQ96JP0 617 aa6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 SUSD3Q96L08 255 aa6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 CEP89Q96ST8 783 aa6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 SLC38A7Q9NVC3 462 aa6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 TRAV19A0A0A6YYK7 116 aa6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 A0A1W2PPC4 97 aa6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 NTN3O00634 580 aaPredicted RBP6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 RFC5P40937 340 aa6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 JAK3P52333 1124 aa6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 PMS2P54278 862 aa6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 RPL10AP62906 217 aaKnown RBP6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 MAP7Q14244 749 aa6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 VWA2Q5GFL6 755 aa6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 GATAD2AQ86YP4 633 aa6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 NXPE1Q8N323 547 aa6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 MFSD2AQ8NA29 543 aa6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 TRIM6Q9C030 488 aaPredicted RBP6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 ABCG4Q9H172 646 aa6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 SALL4Q9UJQ4 1053 aa6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 COL4A3BPQ9Y5P4 624 aa6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 MGAQ8IWI9 3026 aa6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 WDFY3Q8IZQ1 3526 aa6.93□□□□□ -1.3
BRAFP1-201ENST00000445336 A0A1B0GVM2 712 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 DPM1O60762 260 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 PRR29P0C7W0 189 aa6.92□□□□□ -1.3
BRAFP1-201ENST00000445336 THBS2P35442 1172 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms