RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 OTUD4Q01804 1114 aaKnown RBP16.4■□□□□ 0.22
SNX13-204ENST00000444712 TRIM71Q2Q1W2 868 aaKnown RBP16.4■□□□□ 0.22
SNX13-204ENST00000444712 ACTL9Q8TC94 416 aa16.4■□□□□ 0.22
SNX13-204ENST00000444712 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.4■□□□□ 0.22
SNX13-204ENST00000444712 LPPQ93052 612 aa16.4■□□□□ 0.22
SNX13-204ENST00000444712 PEBP4Q96S96 227 aa16.4■□□□□ 0.22
SNX13-204ENST00000444712 FAM118BQ9BPY3 351 aa16.4■□□□□ 0.22
SNX13-204ENST00000444712 STMN4Q9H169 189 aaPredicted RBP16.4■□□□□ 0.22
SNX13-204ENST00000444712 CDH9Q9ULB4 789 aa16.4■□□□□ 0.22
SNX13-204ENST00000444712 MEIS3P2A8K0S8 358 aa16.39■□□□□ 0.21
SNX13-204ENST00000444712 SGK1O00141 431 aa16.39■□□□□ 0.21
SNX13-204ENST00000444712 RIPK2O43353 540 aa16.39■□□□□ 0.21
SNX13-204ENST00000444712 ODC1P11926 461 aa16.39■□□□□ 0.21
SNX13-204ENST00000444712 LCP1P13796 627 aa16.39■□□□□ 0.21
SNX13-204ENST00000444712 PCSK1P29120 753 aa16.39■□□□□ 0.21
SNX13-204ENST00000444712 ARSEP51690 589 aa16.39■□□□□ 0.21
SNX13-204ENST00000444712 CLCNKBP51801 687 aa16.39■□□□□ 0.21
SNX13-204ENST00000444712 ATP11AP98196 1134 aa16.39■□□□□ 0.21
SNX13-204ENST00000444712 P3H1Q32P28 736 aa16.39■□□□□ 0.21
SNX13-204ENST00000444712 HIBCHQ6NVY1 386 aaPredicted RBP16.39■□□□□ 0.21
SNX13-204ENST00000444712 CCDC25Q86WR0 208 aa16.39■□□□□ 0.21
SNX13-204ENST00000444712 RELL1Q8IUW5 271 aa16.39■□□□□ 0.21
SNX13-204ENST00000444712 FUKQ8N0W3 1084 aa16.39■□□□□ 0.21
SNX13-204ENST00000444712 OR2W6PQ8NHA6 318 aa16.39■□□□□ 0.21
SNX13-204ENST00000444712 KHSRPQ92945 711 aaKnown RBP eCLIP16.39■□□□□ 0.218e-7■■■■□ 26
SNX13-204ENST00000444712 EPB41L4BQ9H329 900 aa16.39■□□□□ 0.21
SNX13-204ENST00000444712 CENPHQ9H3R5 247 aa16.39■□□□□ 0.21
SNX13-204ENST00000444712 DSEQ9UL01 958 aa16.39■□□□□ 0.21
SNX13-204ENST00000444712 PTCH2Q9Y6C5 1203 aa16.39■□□□□ 0.21
SNX13-204ENST00000444712 SMAPO00193 183 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 HCRTO43612 131 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 SHOX2O60902 331 aaPredicted RBP16.38■□□□□ 0.21
SNX13-204ENST00000444712 FAM200BP0CF97 657 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 VPS41P49754 854 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 CDR1P51861 262 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 PRMT2P55345 433 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 CAP1Q01518 475 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 DPYSL3Q14195 570 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 SLC29A2Q14542 456 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 MORF4L2Q15014 288 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 UPP1Q16831 310 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 KCTD19Q17RG1 926 aaPredicted RBP16.38■□□□□ 0.21
SNX13-204ENST00000444712 KCTD16Q68DU8 428 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 SCYL2Q6P3W7 929 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 STRADAQ7RTN6 431 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 METTL23Q86XA0 190 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 SLAIN1Q8ND83 568 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 CENPIQ92674 756 aaPredicted RBP16.38■□□□□ 0.21
SNX13-204ENST00000444712 ADAM2Q99965 735 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 SYT15Q9BQS2 421 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 ZNF670Q9BS34 389 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 MED10Q9BTT4 135 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 DDX23Q9BUQ8 820 aaKnown RBP16.38■□□□□ 0.21
SNX13-204ENST00000444712 CAPS2Q9BXY5 557 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 SEZ6LQ9BYH1 1024 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 ROPN1BQ9BZX4 212 aaPredicted RBP16.38■□□□□ 0.21
SNX13-204ENST00000444712 SEMA4AQ9H3S1 761 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 ROPN1Q9HAT0 212 aaPredicted RBP16.38■□□□□ 0.21
SNX13-204ENST00000444712 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.38■□□□□ 0.21
SNX13-204ENST00000444712 TPX2Q9ULW0 747 aaKnown RBP16.38■□□□□ 0.21
SNX13-204ENST00000444712 TP73O15350 636 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 TRPA1O75762 1119 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 GABBR2O75899 941 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 FBXO21O94952 628 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 TGM2P21980 687 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 MAP2K2P36507 400 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 DYNLT1P63172 113 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 C6orf118Q5T5N4 469 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 CYP4V2Q6ZWL3 525 aaPredicted RBP16.38■□□□□ 0.21
SNX13-204ENST00000444712 PIGZQ86VD9 579 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 ZCCHC9Q8N567 271 aaKnown RBP16.38■□□□□ 0.21
SNX13-204ENST00000444712 RSAD2Q8WXG1 361 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 HAUS1Q96CS2 278 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 PGM2Q96G03 612 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 LPIN3Q9BQK8 851 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 B3GNT5Q9BYG0 378 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 CDC42EP4Q9H3Q1 356 aaKnown RBP16.38■□□□□ 0.21
SNX13-204ENST00000444712 LRRC4Q9HBW1 653 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 MIOSQ9NXC5 875 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 SHOC2Q9UQ13 582 aa16.38■□□□□ 0.21
SNX13-204ENST00000444712 INPPL1O15357 1258 aa16.37■□□□□ 0.21
SNX13-204ENST00000444712 DAB1O75553 588 aa16.37■□□□□ 0.21
SNX13-204ENST00000444712 CD48P09326 243 aa16.37■□□□□ 0.21
SNX13-204ENST00000444712 TKTP29401 623 aaKnown RBP16.37■□□□□ 0.21
SNX13-204ENST00000444712 MATKP42679 507 aa16.37■□□□□ 0.21
SNX13-204ENST00000444712 TUSC3Q13454 348 aa16.37■□□□□ 0.21
SNX13-204ENST00000444712 TAF5Q15542 800 aa16.37■□□□□ 0.21
SNX13-204ENST00000444712 MDH1BQ5I0G3 518 aa16.37■□□□□ 0.21
SNX13-204ENST00000444712 ERMARDQ5T6L9 678 aa16.37■□□□□ 0.21
SNX13-204ENST00000444712 SH3PXD2AQ5TCZ1 1133 aa16.37■□□□□ 0.21
SNX13-204ENST00000444712 FAM43BQ6ZT52 329 aaPredicted RBP16.37■□□□□ 0.21
SNX13-204ENST00000444712 SIX6OS1Q8N1H7 587 aa16.37■□□□□ 0.21
SNX13-204ENST00000444712 P3H4Q92791 437 aa16.37■□□□□ 0.21
SNX13-204ENST00000444712 RNF157Q96PX1 679 aa16.37■□□□□ 0.21
SNX13-204ENST00000444712 C11orf84Q9BUA3 381 aaPredicted RBP16.37■□□□□ 0.21
SNX13-204ENST00000444712 PHACTR1Q9C0D0 580 aa16.37■□□□□ 0.21
SNX13-204ENST00000444712 PRDM16Q9HAZ2 1276 aa16.37■□□□□ 0.21
SNX13-204ENST00000444712 HMX1Q9NP08 348 aaPredicted RBP16.37■□□□□ 0.21
SNX13-204ENST00000444712 TRMT13Q9NUP7 481 aaKnown RBP16.37■□□□□ 0.21
SNX13-204ENST00000444712 MGEA5O60502 916 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms