RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 CPQQ9Y646 472 aa11.53□□□□□ -0.56
SF3A1-203ENST00000444440 ABCA7Q8IZY2 2146 aa11.53□□□□□ -0.56
SF3A1-203ENST00000444440 FAM92AA1XBS5 289 aa11.52□□□□□ -0.57
SF3A1-203ENST00000444440 TRDMT1O14717 391 aaKnown RBP11.52□□□□□ -0.57
SF3A1-203ENST00000444440 KINO60870 393 aaKnown RBP11.52□□□□□ -0.57
SF3A1-203ENST00000444440 ZDHHC11BP0C7U3 371 aa11.52□□□□□ -0.57
SF3A1-203ENST00000444440 P4HA1P13674 534 aa11.52□□□□□ -0.57
SF3A1-203ENST00000444440 OPRD1P41143 372 aa11.52□□□□□ -0.57
SF3A1-203ENST00000444440 IFNAR2P48551 515 aa11.52□□□□□ -0.57
SF3A1-203ENST00000444440 MXI1P50539 228 aa11.52□□□□□ -0.57
SF3A1-203ENST00000444440 CCR3P51677 355 aa11.52□□□□□ -0.57
SF3A1-203ENST00000444440 LRRC32Q14392 662 aa11.52□□□□□ -0.57
SF3A1-203ENST00000444440 PDGFRLQ15198 375 aa11.52□□□□□ -0.57
SF3A1-203ENST00000444440 ZNF394Q53GI3 561 aa11.52□□□□□ -0.57
SF3A1-203ENST00000444440 DGKKQ5KSL6 1271 aa11.52□□□□□ -0.57
SF3A1-203ENST00000444440 KRT39Q6A163 491 aa11.52□□□□□ -0.57
SF3A1-203ENST00000444440 CC2D1AQ6P1N0 951 aaPredicted RBP11.52□□□□□ -0.57
SF3A1-203ENST00000444440 ZC3H14Q6PJT7 736 aaKnown RBP11.52□□□□□ -0.57
SF3A1-203ENST00000444440 FILIP1Q7Z7B0 1213 aa11.52□□□□□ -0.57
SF3A1-203ENST00000444440 UNC93AQ86WB7 457 aa11.52□□□□□ -0.57
SF3A1-203ENST00000444440 SPEM1Q8N4L4 309 aa11.52□□□□□ -0.57
SF3A1-203ENST00000444440 JAKMIP2Q96AA8 810 aa11.52□□□□□ -0.57
SF3A1-203ENST00000444440 HNRNPABQ99729 332 aaKnown RBP11.52□□□□□ -0.57
SF3A1-203ENST00000444440 DUSP9Q99956 384 aaKnown RBP11.52□□□□□ -0.57
SF3A1-203ENST00000444440 SEMA4AQ9H3S1 761 aa11.52□□□□□ -0.57
SF3A1-203ENST00000444440 RMND1Q9NWS8 449 aa11.52□□□□□ -0.57
SF3A1-203ENST00000444440 CHMP5Q9NZZ3 219 aa11.52□□□□□ -0.57
SF3A1-203ENST00000444440 PCDHGA2Q9Y5H1 932 aa11.52□□□□□ -0.57
SF3A1-203ENST00000444440 CHURC1-FNTBB4DL54 471 aa11.51□□□□□ -0.57
SF3A1-203ENST00000444440 PPP1R3GB7ZBB8 358 aa11.51□□□□□ -0.57
SF3A1-203ENST00000444440 CETN3O15182 167 aa11.51□□□□□ -0.57
SF3A1-203ENST00000444440 CYP26A1O43174 497 aa11.51□□□□□ -0.57
SF3A1-203ENST00000444440 RNF40O75150 1001 aa11.51□□□□□ -0.57
SF3A1-203ENST00000444440 RTN3O95197 1032 aaPredicted RBP11.51□□□□□ -0.57
SF3A1-203ENST00000444440 PAPSS2O95340 614 aaPredicted RBP11.51□□□□□ -0.57
SF3A1-203ENST00000444440 CYP17A1P05093 508 aa11.51□□□□□ -0.57
SF3A1-203ENST00000444440 EPB41P11171 864 aaKnown RBP11.51□□□□□ -0.57
SF3A1-203ENST00000444440 MBL2P11226 248 aaPredicted RBP11.51□□□□□ -0.57
SF3A1-203ENST00000444440 GTF2H1P32780 548 aa11.51□□□□□ -0.57
SF3A1-203ENST00000444440 CXCL12P48061 93 aa11.51□□□□□ -0.57
SF3A1-203ENST00000444440 PXNP49023 591 aaPredicted RBP11.51□□□□□ -0.57
SF3A1-203ENST00000444440 FNTBP49356 437 aa11.51□□□□□ -0.57
SF3A1-203ENST00000444440 DCAF17Q5H9S7 520 aaPredicted RBP11.51□□□□□ -0.57
SF3A1-203ENST00000444440 PPP1R26Q5T8A7 1209 aaPredicted RBP11.51□□□□□ -0.57
SF3A1-203ENST00000444440 SNX30Q5VWJ9 437 aa11.51□□□□□ -0.57
SF3A1-203ENST00000444440 HEATR6Q6AI08 1181 aaKnown RBP11.51□□□□□ -0.57
SF3A1-203ENST00000444440 C1orf228Q6PIY5 440 aa11.51□□□□□ -0.57
SF3A1-203ENST00000444440 C12orf40Q86WS4 652 aa11.51□□□□□ -0.57
SF3A1-203ENST00000444440 CPA6Q8N4T0 437 aa11.51□□□□□ -0.57
SF3A1-203ENST00000444440 FBXL13Q8NEE6 735 aa11.51□□□□□ -0.57
SF3A1-203ENST00000444440 ATP2A3Q93084 1043 aa11.51□□□□□ -0.57
SF3A1-203ENST00000444440 SLC35C1Q96A29 364 aa11.51□□□□□ -0.57
SF3A1-203ENST00000444440 CYFIP2Q96F07 1278 aa11.51□□□□□ -0.57
SF3A1-203ENST00000444440 SLITRK1Q96PX8 696 aa11.51□□□□□ -0.57
SF3A1-203ENST00000444440 IER2Q9BTL4 223 aa11.51□□□□□ -0.57
SF3A1-203ENST00000444440 NT5C1AQ9BXI3 368 aa11.51□□□□□ -0.57
SF3A1-203ENST00000444440 EPC1Q9H2F5 836 aa11.51□□□□□ -0.57
SF3A1-203ENST00000444440 CYP3A43Q9HB55 503 aa11.51□□□□□ -0.57
SF3A1-203ENST00000444440 NMUR1Q9HB89 426 aa11.51□□□□□ -0.57
SF3A1-203ENST00000444440 RAB20Q9NX57 234 aa11.51□□□□□ -0.57
SF3A1-203ENST00000444440 CFAP97Q9P2B7 532 aa11.51□□□□□ -0.57
SF3A1-203ENST00000444440 SMG5Q9UPR3 1016 aaKnown RBP11.51□□□□□ -0.57
SF3A1-203ENST00000444440 ATP8B3O60423 1300 aa11.51□□□□□ -0.57
SF3A1-203ENST00000444440 NYNRINQ9P2P1 1898 aaKnown RBP11.51□□□□□ -0.57
SF3A1-203ENST00000444440 BIN1O00499 593 aa11.5□□□□□ -0.57
SF3A1-203ENST00000444440 MDM4O15151 490 aa11.5□□□□□ -0.57
SF3A1-203ENST00000444440 SLC16A3O15427 465 aaKnown RBP11.5□□□□□ -0.57
SF3A1-203ENST00000444440 HRO43593 1189 aa11.5□□□□□ -0.57
SF3A1-203ENST00000444440 TBX18O95935 607 aa11.5□□□□□ -0.57
SF3A1-203ENST00000444440 FAM200BP0CF97 657 aa11.5□□□□□ -0.57
SF3A1-203ENST00000444440 CHRM1P11229 460 aaPredicted RBP11.5□□□□□ -0.57
SF3A1-203ENST00000444440 PFKLP17858 780 aa11.5□□□□□ -0.57
SF3A1-203ENST00000444440 PPP3CCP48454 512 aa11.5□□□□□ -0.57
SF3A1-203ENST00000444440 RAD23BP54727 409 aa11.5□□□□□ -0.57
SF3A1-203ENST00000444440 MORC3Q14149 939 aa11.5□□□□□ -0.57
SF3A1-203ENST00000444440 LPAL2Q16609 132 aa11.5□□□□□ -0.57
SF3A1-203ENST00000444440 TCERG1LQ5VWI1 586 aa11.5□□□□□ -0.57
SF3A1-203ENST00000444440 TTI2Q6NXR4 508 aa11.5□□□□□ -0.57
SF3A1-203ENST00000444440 KIAA2013Q8IYS2 634 aa11.5□□□□□ -0.57
SF3A1-203ENST00000444440 ADGRG2Q8IZP9 1017 aa11.5□□□□□ -0.57
SF3A1-203ENST00000444440 SLC4A11Q8NBS3 891 aa11.5□□□□□ -0.57
SF3A1-203ENST00000444440 ATRIPQ8WXE1 791 aa11.5□□□□□ -0.57
SF3A1-203ENST00000444440 OVCA2Q8WZ82 227 aa11.5□□□□□ -0.57
SF3A1-203ENST00000444440 CD101Q93033 1021 aa11.5□□□□□ -0.57
SF3A1-203ENST00000444440 P2RY13Q9BPV8 354 aa11.5□□□□□ -0.57
SF3A1-203ENST00000444440 GTPBP4Q9BZE4 634 aaKnown RBP11.5□□□□□ -0.57
SF3A1-203ENST00000444440 IMPG2Q9BZV3 1241 aa11.5□□□□□ -0.57
SF3A1-203ENST00000444440 CISHQ9NSE2 258 aa11.5□□□□□ -0.57
SF3A1-203ENST00000444440 COQ4Q9Y3A0 265 aa11.5□□□□□ -0.57
SF3A1-203ENST00000444440 ADAMTS9Q9P2N4 1935 aa11.5□□□□□ -0.57
SF3A1-203ENST00000444440 TULP2O00295 520 aa11.49□□□□□ -0.57
SF3A1-203ENST00000444440 GREM1O60565 184 aa11.49□□□□□ -0.57
SF3A1-203ENST00000444440 SMC2O95347 1197 aa11.49□□□□□ -0.57
SF3A1-203ENST00000444440 IRF1P10914 325 aa11.49□□□□□ -0.57
SF3A1-203ENST00000444440 SLC6A11P48066 632 aa11.49□□□□□ -0.57
SF3A1-203ENST00000444440 FKBP3Q00688 224 aaKnown RBP11.49□□□□□ -0.57
SF3A1-203ENST00000444440 LRRC63Q05C16 580 aa11.49□□□□□ -0.57
SF3A1-203ENST00000444440 GRSF1Q12849 480 aaKnown RBP eCLIP11.49□□□□□ -0.57
SF3A1-203ENST00000444440 DHCR24Q15392 516 aa11.49□□□□□ -0.57
SF3A1-203ENST00000444440 HECTD3Q5T447 861 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms