RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 HEXIM2Q96MH2 286 aaKnown RBP21.25■□□□□ 0.99
LRCH3-208ENST00000443727 HNRNPABQ99729 332 aaKnown RBP21.25■□□□□ 0.99
LRCH3-208ENST00000443727 GMIPQ9P107 970 aa21.25■□□□□ 0.99
LRCH3-208ENST00000443727 SLC9A3R1O14745 358 aaPredicted RBP21.24■□□□□ 0.99
LRCH3-208ENST00000443727 OLFM2O95897 454 aa21.24■□□□□ 0.99
LRCH3-208ENST00000443727 DRD1P21728 446 aa21.24■□□□□ 0.99
LRCH3-208ENST00000443727 GALK1P51570 392 aa21.24■□□□□ 0.99
LRCH3-208ENST00000443727 MCCD1P59942 119 aaPredicted RBP21.24■□□□□ 0.99
LRCH3-208ENST00000443727 ZXDBP98169 803 aa21.24■□□□□ 0.99
LRCH3-208ENST00000443727 ZNF394Q53GI3 561 aa21.24■□□□□ 0.99
LRCH3-208ENST00000443727 FSTL4Q6MZW2 842 aa21.24■□□□□ 0.99
LRCH3-208ENST00000443727 FILIP1Q7Z7B0 1213 aa21.24■□□□□ 0.99
LRCH3-208ENST00000443727 ZC3H3Q8IXZ2 948 aaKnown RBP21.24■□□□□ 0.99
LRCH3-208ENST00000443727 ZMIZ2Q8NF64 920 aa21.24■□□□□ 0.99
LRCH3-208ENST00000443727 NELL1Q92832 810 aa21.24■□□□□ 0.99
LRCH3-208ENST00000443727 CHFRQ96EP1 664 aa21.24■□□□□ 0.99
LRCH3-208ENST00000443727 CSNK1G1Q9HCP0 422 aa21.24■□□□□ 0.99
LRCH3-208ENST00000443727 IL37Q9NZH6 218 aa21.24■□□□□ 0.99
LRCH3-208ENST00000443727 ANAPC1Q9H1A4 1944 aa21.23■□□□□ 0.99
LRCH3-208ENST00000443727 SCAMP3O14828 347 aaKnown RBP21.23■□□□□ 0.99
LRCH3-208ENST00000443727 COCHO43405 550 aa21.23■□□□□ 0.99
LRCH3-208ENST00000443727 ATG13O75143 517 aa21.23■□□□□ 0.99
LRCH3-208ENST00000443727 EGFP01133 1207 aa21.23■□□□□ 0.99
LRCH3-208ENST00000443727 CBWD6Q4V339 395 aa21.23■□□□□ 0.99
LRCH3-208ENST00000443727 CBWD3Q5JTY5 395 aa21.23■□□□□ 0.99
LRCH3-208ENST00000443727 CBWD5Q5RIA9 395 aa21.23■□□□□ 0.99
LRCH3-208ENST00000443727 WHAMMQ8TF30 809 aa21.23■□□□□ 0.99
LRCH3-208ENST00000443727 RUBCNQ92622 972 aa21.23■□□□□ 0.99
LRCH3-208ENST00000443727 CD101Q93033 1021 aa21.23■□□□□ 0.99
LRCH3-208ENST00000443727 FAXDC2Q96IV6 333 aa21.23■□□□□ 0.99
LRCH3-208ENST00000443727 CCSER2Q9H7U1 834 aa21.23■□□□□ 0.99
LRCH3-208ENST00000443727 METTL14Q9HCE5 456 aaKnown RBP21.23■□□□□ 0.99
LRCH3-208ENST00000443727 TLR8Q9NR97 1041 aaKnown RBP21.23■□□□□ 0.99
LRCH3-208ENST00000443727 CISHQ9NSE2 258 aa21.23■□□□□ 0.99
LRCH3-208ENST00000443727 KIF26AQ9ULI4 1882 aaPredicted RBP21.23■□□□□ 0.99
LRCH3-208ENST00000443727 EP300Q09472 2414 aaPredicted RBP21.22■□□□□ 0.99
LRCH3-208ENST00000443727 BIN1O00499 593 aa21.22■□□□□ 0.99
LRCH3-208ENST00000443727 LILRB5O75023 590 aa21.22■□□□□ 0.99
LRCH3-208ENST00000443727 TDGF1P13385 188 aa21.22■□□□□ 0.99
LRCH3-208ENST00000443727 TUBP50607 506 aa21.22■□□□□ 0.99
LRCH3-208ENST00000443727 CCDC40Q4G0X9 1142 aa21.22■□□□□ 0.99
LRCH3-208ENST00000443727 SNX30Q5VWJ9 437 aa21.22■□□□□ 0.99
LRCH3-208ENST00000443727 HEATR6Q6AI08 1181 aaKnown RBP21.22■□□□□ 0.99
LRCH3-208ENST00000443727 CLEC20AQ6ZU45 233 aa21.22■□□□□ 0.99
LRCH3-208ENST00000443727 KIAA1958Q8N8K9 716 aa21.22■□□□□ 0.99
LRCH3-208ENST00000443727 SUMF1Q8NBK3 374 aa21.22■□□□□ 0.99
LRCH3-208ENST00000443727 SECISBP2LQ93073 1101 aaKnown RBP21.22■□□□□ 0.99
LRCH3-208ENST00000443727 TATDN2Q93075 761 aa21.22■□□□□ 0.99
LRCH3-208ENST00000443727 CEP63Q96MT8 703 aa21.22■□□□□ 0.99
LRCH3-208ENST00000443727 NCDNQ9UBB6 729 aa21.22■□□□□ 0.99
LRCH3-208ENST00000443727 RAB23Q9ULC3 237 aa21.22■□□□□ 0.99
LRCH3-208ENST00000443727 SH3BP1Q9Y3L3 701 aa21.22■□□□□ 0.99
LRCH3-208ENST00000443727 WDR87Q6ZQQ6 2873 aa21.21■□□□□ 0.99
LRCH3-208ENST00000443727 BICDL2A1A5D9 508 aa21.21■□□□□ 0.99
LRCH3-208ENST00000443727 FAM92AA1XBS5 289 aa21.21■□□□□ 0.99
LRCH3-208ENST00000443727 CHURC1-FNTBB4DL54 471 aa21.21■□□□□ 0.99
LRCH3-208ENST00000443727 RNF40O75150 1001 aa21.21■□□□□ 0.99
LRCH3-208ENST00000443727 PAPSS2O95340 614 aaPredicted RBP21.21■□□□□ 0.99
LRCH3-208ENST00000443727 CD44P16070 742 aaKnown RBP21.21■□□□□ 0.99
LRCH3-208ENST00000443727 ACO1P21399 889 aaKnown RBP21.21■□□□□ 0.99
LRCH3-208ENST00000443727 FNTBP49356 437 aa21.21■□□□□ 0.99
LRCH3-208ENST00000443727 FBXO43Q4G163 708 aa21.21■□□□□ 0.99
LRCH3-208ENST00000443727 NAIF1Q69YI7 327 aaPredicted RBP21.21■□□□□ 0.99
LRCH3-208ENST00000443727 NELFBQ8WX92 580 aa21.21■□□□□ 0.99
LRCH3-208ENST00000443727 TMEM176AQ96HP8 235 aa21.21■□□□□ 0.99
LRCH3-208ENST00000443727 ARID3AQ99856 593 aa21.21■□□□□ 0.99
LRCH3-208ENST00000443727 EPC1Q9H2F5 836 aa21.21■□□□□ 0.99
LRCH3-208ENST00000443727 FBRSL1Q9HCM7 1045 aaKnown RBP21.21■□□□□ 0.99
LRCH3-208ENST00000443727 TBC1D14Q9P2M4 693 aa21.21■□□□□ 0.99
LRCH3-208ENST00000443727 SMG5Q9UPR3 1016 aaKnown RBP21.21■□□□□ 0.99
LRCH3-208ENST00000443727 GVINP1Q7Z2Y8 2422 aa21.2■□□□□ 0.99
LRCH3-208ENST00000443727 TLR5O60602 858 aa21.2■□□□□ 0.98
LRCH3-208ENST00000443727 ZDHHC11BP0C7U3 371 aa21.2■□□□□ 0.98
LRCH3-208ENST00000443727 YWHAEP62258 255 aaKnown RBP21.2■□□□□ 0.98
LRCH3-208ENST00000443727 PPP1R26Q5T8A7 1209 aaPredicted RBP21.2■□□□□ 0.98
LRCH3-208ENST00000443727 GPRIN1Q7Z2K8 1008 aa21.2■□□□□ 0.98
LRCH3-208ENST00000443727 SLC35C1Q96A29 364 aa21.2■□□□□ 0.98
LRCH3-208ENST00000443727 DUSP16Q9BY84 665 aa21.2■□□□□ 0.98
LRCH3-208ENST00000443727 C2orf42Q9NWW7 574 aa21.2■□□□□ 0.98
LRCH3-208ENST00000443727 CHMP5Q9NZZ3 219 aa21.2■□□□□ 0.98
LRCH3-208ENST00000443727 SLC8A2Q9UPR5 921 aa21.2■□□□□ 0.98
LRCH3-208ENST00000443727 CTNND2Q9UQB3 1225 aa21.2■□□□□ 0.98
LRCH3-208ENST00000443727 SCML2Q9UQR0 700 aa21.2■□□□□ 0.98
LRCH3-208ENST00000443727 FANCMQ8IYD8 2048 aa21.19■□□□□ 0.98
LRCH3-208ENST00000443727 E2F8A0AVK6 867 aa21.19■□□□□ 0.98
LRCH3-208ENST00000443727 K7ESF4 209 aa21.19■□□□□ 0.98
LRCH3-208ENST00000443727 CYP26A1O43174 497 aa21.19■□□□□ 0.98
LRCH3-208ENST00000443727 ADH1CP00326 375 aa21.19■□□□□ 0.98
LRCH3-208ENST00000443727 CYP17A1P05093 508 aa21.19■□□□□ 0.98
LRCH3-208ENST00000443727 IRF1P10914 325 aa21.19■□□□□ 0.98
LRCH3-208ENST00000443727 SLC8A3P57103 927 aa21.19■□□□□ 0.98
LRCH3-208ENST00000443727 LRMPQ12912 555 aa21.19■□□□□ 0.98
LRCH3-208ENST00000443727 MORC3Q14149 939 aa21.19■□□□□ 0.98
LRCH3-208ENST00000443727 PRR23BQ6ZRT6 265 aa21.19■□□□□ 0.98
LRCH3-208ENST00000443727 LONP2Q86WA8 852 aa21.19■□□□□ 0.98
LRCH3-208ENST00000443727 ADGRG2Q8IZP9 1017 aa21.19■□□□□ 0.98
LRCH3-208ENST00000443727 CCDC26Q8TAB7 109 aa21.19■□□□□ 0.98
LRCH3-208ENST00000443727 FAM124BQ9H5Z6 455 aaPredicted RBP21.19■□□□□ 0.98
LRCH3-208ENST00000443727 PNPLA8Q9NP80 782 aa21.19■□□□□ 0.98
LRCH3-208ENST00000443727 COQ4Q9Y3A0 265 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms