RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 CLEC17AQ6ZS10 378 aa23.41■■□□□ 1.34
HDLBP-220ENST00000442730 SLC4A11Q8NBS3 891 aa23.41■■□□□ 1.34
HDLBP-220ENST00000442730 GBP4Q96PP9 640 aa23.41■■□□□ 1.34
HDLBP-220ENST00000442730 CPQQ9Y646 472 aa23.41■■□□□ 1.34
HDLBP-220ENST00000442730 PMM2O15305 246 aa23.4■■□□□ 1.34
HDLBP-220ENST00000442730 IFNAR2P48551 515 aa23.4■■□□□ 1.34
HDLBP-220ENST00000442730 TUBP50607 506 aa23.4■■□□□ 1.34
HDLBP-220ENST00000442730 EML3Q32P44 896 aa23.4■■□□□ 1.34
HDLBP-220ENST00000442730 ZNF528Q3MIS6 628 aa23.4■■□□□ 1.34
HDLBP-220ENST00000442730 PPP1R26Q5T8A7 1209 aaPredicted RBP23.4■■□□□ 1.34
HDLBP-220ENST00000442730 CPA6Q8N4T0 437 aa23.4■■□□□ 1.34
HDLBP-220ENST00000442730 ATP2A3Q93084 1043 aa23.4■■□□□ 1.34
HDLBP-220ENST00000442730 JAKMIP2Q96AA8 810 aa23.4■■□□□ 1.34
HDLBP-220ENST00000442730 PNPLA8Q9NP80 782 aa23.4■■□□□ 1.34
HDLBP-220ENST00000442730 RBM12Q9NTZ6 932 aaKnown RBP23.4■■□□□ 1.34
HDLBP-220ENST00000442730 SMPD4Q9NXE4 827 aa23.4■■□□□ 1.34
HDLBP-220ENST00000442730 COCHO43405 550 aa23.39■■□□□ 1.33
HDLBP-220ENST00000442730 GFRA3O60609 400 aa23.39■■□□□ 1.33
HDLBP-220ENST00000442730 PGFP49763 221 aa23.39■■□□□ 1.33
HDLBP-220ENST00000442730 CCINQ13939 588 aa23.39■■□□□ 1.33
HDLBP-220ENST00000442730 GAS6Q14393 721 aa23.39■■□□□ 1.33
HDLBP-220ENST00000442730 HECTD3Q5T447 861 aa23.39■■□□□ 1.33
HDLBP-220ENST00000442730 MAMSTRQ6ZN01 415 aa23.39■■□□□ 1.33
HDLBP-220ENST00000442730 Q6ZS52 159 aa23.39■■□□□ 1.33
HDLBP-220ENST00000442730 TRIM59Q8IWR1 403 aa23.39■■□□□ 1.33
HDLBP-220ENST00000442730 TMEM176AQ96HP8 235 aa23.39■■□□□ 1.33
HDLBP-220ENST00000442730 HEXIM2Q96MH2 286 aaKnown RBP23.39■■□□□ 1.33
HDLBP-220ENST00000442730 CLSTN2Q9H4D0 955 aa23.39■■□□□ 1.33
HDLBP-220ENST00000442730 FBXO44Q9H4M3 255 aa23.39■■□□□ 1.33
HDLBP-220ENST00000442730 ECT2Q9H8V3 914 aa23.39■■□□□ 1.33
HDLBP-220ENST00000442730 CHORDC1Q9UHD1 332 aaPredicted RBP23.39■■□□□ 1.33
HDLBP-220ENST00000442730 R4GN57 208 aa23.39■■□□□ 1.33
HDLBP-220ENST00000442730 PRR23AA6NEV1 266 aa23.38■■□□□ 1.33
HDLBP-220ENST00000442730 GNA14O95837 355 aa23.38■■□□□ 1.33
HDLBP-220ENST00000442730 MBL2P11226 248 aaPredicted RBP23.38■■□□□ 1.33
HDLBP-220ENST00000442730 MARSP56192 900 aaKnown RBP23.38■■□□□ 1.33
HDLBP-220ENST00000442730 CSTF1Q05048 431 aaKnown RBP23.38■■□□□ 1.33
HDLBP-220ENST00000442730 LRMPQ12912 555 aa23.38■■□□□ 1.33
HDLBP-220ENST00000442730 DGKKQ5KSL6 1271 aa23.38■■□□□ 1.33
HDLBP-220ENST00000442730 UBR7Q8N806 425 aa23.38■■□□□ 1.33
HDLBP-220ENST00000442730 KIAA1958Q8N8K9 716 aa23.38■■□□□ 1.33
HDLBP-220ENST00000442730 ZFRQ96KR1 1074 aaKnown RBP23.38■■□□□ 1.33
HDLBP-220ENST00000442730 DUSP16Q9BY84 665 aa23.38■■□□□ 1.33
HDLBP-220ENST00000442730 CCSER2Q9H7U1 834 aa23.38■■□□□ 1.33
HDLBP-220ENST00000442730 RWDD2AQ9UIY3 292 aa23.38■■□□□ 1.33
HDLBP-220ENST00000442730 SCML2Q9UQR0 700 aa23.38■■□□□ 1.33
HDLBP-220ENST00000442730 CYP26A1O43174 497 aa23.37■■□□□ 1.33
HDLBP-220ENST00000442730 GJA4P35212 333 aa23.37■■□□□ 1.33
HDLBP-220ENST00000442730 TMEM196Q5HYL7 178 aa23.37■■□□□ 1.33
HDLBP-220ENST00000442730 ARHGAP17Q68EM7 881 aa23.37■■□□□ 1.33
HDLBP-220ENST00000442730 FSTL4Q6MZW2 842 aa23.37■■□□□ 1.33
HDLBP-220ENST00000442730 ZC3H14Q6PJT7 736 aaKnown RBP23.37■■□□□ 1.33
HDLBP-220ENST00000442730 ASCL5Q7RTU5 278 aa23.37■■□□□ 1.33
HDLBP-220ENST00000442730 NKD2Q969F2 451 aaPredicted RBP23.37■■□□□ 1.33
HDLBP-220ENST00000442730 SRRTQ9BXP5 876 aaKnown RBP23.37■■□□□ 1.33
HDLBP-220ENST00000442730 LINC00597Q9H2U6 94 aa23.37■■□□□ 1.33
HDLBP-220ENST00000442730 CFAP97Q9P2B7 532 aa23.37■■□□□ 1.33
HDLBP-220ENST00000442730 MYO16Q9Y6X6 1858 aa23.36■■□□□ 1.33
HDLBP-220ENST00000442730 TRDMT1O14717 391 aaKnown RBP23.36■■□□□ 1.33
HDLBP-220ENST00000442730 P4HA2O15460 535 aa23.36■■□□□ 1.33
HDLBP-220ENST00000442730 TDGF1P13385 188 aa23.36■■□□□ 1.33
HDLBP-220ENST00000442730 TBXAS1P24557 533 aaPredicted RBP23.36■■□□□ 1.33
HDLBP-220ENST00000442730 NAIF1Q69YI7 327 aaPredicted RBP23.36■■□□□ 1.33
HDLBP-220ENST00000442730 TSSK4Q6SA08 328 aa23.36■■□□□ 1.33
HDLBP-220ENST00000442730 DDX42Q86XP3 938 aaKnown RBP eCLIP23.36■■□□□ 1.33
HDLBP-220ENST00000442730 LMO3Q8TAP4 145 aa23.36■■□□□ 1.33
HDLBP-220ENST00000442730 NELL1Q92832 810 aa23.36■■□□□ 1.33
HDLBP-220ENST00000442730 MED15Q96RN5 788 aa23.36■■□□□ 1.33
HDLBP-220ENST00000442730 TLR8Q9NR97 1041 aaKnown RBP23.36■■□□□ 1.33
HDLBP-220ENST00000442730 SCAMP3O14828 347 aaKnown RBP23.35■■□□□ 1.33
HDLBP-220ENST00000442730 NFATC1O95644 943 aa23.35■■□□□ 1.33
HDLBP-220ENST00000442730 ACO1P21399 889 aaKnown RBP23.35■■□□□ 1.33
HDLBP-220ENST00000442730 CCR3P51677 355 aa23.35■■□□□ 1.33
HDLBP-220ENST00000442730 KIF11P52732 1056 aa23.35■■□□□ 1.33
HDLBP-220ENST00000442730 YWHAEP62258 255 aaKnown RBP23.35■■□□□ 1.33
HDLBP-220ENST00000442730 AMPD2Q01433 879 aa23.35■■□□□ 1.33
HDLBP-220ENST00000442730 SYNPOQ8N3V7 929 aa23.35■■□□□ 1.33
HDLBP-220ENST00000442730 SPEM1Q8N4L4 309 aa23.35■■□□□ 1.33
HDLBP-220ENST00000442730 NT5C1BQ96P26 610 aa23.35■■□□□ 1.33
HDLBP-220ENST00000442730 OSER1Q9NX31 292 aa23.35■■□□□ 1.33
HDLBP-220ENST00000442730 WDR87Q6ZQQ6 2873 aa23.35■■□□□ 1.33
HDLBP-220ENST00000442730 FANCMQ8IYD8 2048 aa23.34■■□□□ 1.33
HDLBP-220ENST00000442730 TLR5O60602 858 aa23.34■■□□□ 1.33
HDLBP-220ENST00000442730 SATB1Q01826 763 aa23.34■■□□□ 1.33
HDLBP-220ENST00000442730 CETN1Q12798 172 aa23.34■■□□□ 1.33
HDLBP-220ENST00000442730 KCNH2Q12809 1159 aa23.34■■□□□ 1.33
HDLBP-220ENST00000442730 GRSF1Q12849 480 aaKnown RBP eCLIP23.34■■□□□ 1.33
HDLBP-220ENST00000442730 P2RY13Q9BPV8 354 aa23.34■■□□□ 1.33
HDLBP-220ENST00000442730 FBRSL1Q9HCM7 1045 aaKnown RBP23.34■■□□□ 1.33
HDLBP-220ENST00000442730 CYLDQ9NQC7 956 aa23.34■■□□□ 1.33
HDLBP-220ENST00000442730 PCDHGA2Q9Y5H1 932 aa23.34■■□□□ 1.33
HDLBP-220ENST00000442730 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.34■■□□□ 1.33
HDLBP-220ENST00000442730 MYH10P35580 1976 aa23.34■■□□□ 1.33
HDLBP-220ENST00000442730 RIF1Q5UIP0 2472 aaKnown RBP23.34■■□□□ 1.33
HDLBP-220ENST00000442730 FGFR1OPO95684 399 aaKnown RBP23.33■■□□□ 1.33
HDLBP-220ENST00000442730 AFPP02771 609 aaKnown RBP23.33■■□□□ 1.33
HDLBP-220ENST00000442730 CYP17A1P05093 508 aa23.33■■□□□ 1.33
HDLBP-220ENST00000442730 CCDC192P0DO97 292 aa23.33■■□□□ 1.33
HDLBP-220ENST00000442730 GOLGA7BQ2TAP0 167 aa23.33■■□□□ 1.33
HDLBP-220ENST00000442730 CCDC186Q7Z3E2 898 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms