RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 HMGXB4Q9UGU5 601 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 MTO1Q9Y2Z2 717 aaKnown RBP17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 NUMBLQ9Y6R0 609 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 SSC5DA1L4H1 1573 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 NFKBIEO00221 500 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 CHADO15335 359 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 PYGBP11216 843 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 GPD2P43304 727 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 NEK3P51956 506 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 ZBTB16Q05516 673 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 KCNJ11Q14654 390 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 SYCP2LQ5T4T6 812 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 ENDOVQ8N8Q3 282 aaKnown RBP17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 ARMC2Q8NEN0 867 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 IQCGQ9H095 443 aaKnown RBP17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 ZBTB42B2RXF5 422 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 H7C0C1 242 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 CILPO75339 1184 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 ENDOD1O94919 500 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 HMGCRP04035 888 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 ITGB3P05106 788 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 ATP5OP48047 213 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 HSDL1Q3SXM5 330 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 NCAPG2Q86XI2 1143 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 RIOX2Q8IUF8 465 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 TMEM192Q8IY95 271 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 PEBP4Q96S96 227 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 ELOVL4Q9GZR5 314 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 CDT1Q9H211 546 aa17.2■□□□□ 0.34
SEMA3B-207ENST00000441915 ENTPD5O75356 428 aa17.19■□□□□ 0.34
SEMA3B-207ENST00000441915 LMNAP02545 664 aaKnown RBP17.19■□□□□ 0.34
SEMA3B-207ENST00000441915 NFICP08651 508 aa17.19■□□□□ 0.34
SEMA3B-207ENST00000441915 GPD1P21695 349 aa17.19■□□□□ 0.34
SEMA3B-207ENST00000441915 PRKD1Q15139 912 aaPredicted RBP17.19■□□□□ 0.34
SEMA3B-207ENST00000441915 SH3D19Q5HYK7 790 aa17.19■□□□□ 0.34
SEMA3B-207ENST00000441915 DPH6Q7L8W6 267 aa17.19■□□□□ 0.34
SEMA3B-207ENST00000441915 ZNF483Q8TF39 744 aaPredicted RBP17.19■□□□□ 0.34
SEMA3B-207ENST00000441915 GPR20Q99678 358 aa17.19■□□□□ 0.34
SEMA3B-207ENST00000441915 BTBD10Q9BSF8 475 aa17.19■□□□□ 0.34
SEMA3B-207ENST00000441915 CNPY3Q9BT09 278 aa17.19■□□□□ 0.34
SEMA3B-207ENST00000441915 DCLRE1BQ9H816 532 aa17.19■□□□□ 0.34
SEMA3B-207ENST00000441915 RAB6BQ9NRW1 208 aa17.19■□□□□ 0.34
SEMA3B-207ENST00000441915 BTBD7Q9P203 1132 aa17.19■□□□□ 0.34
SEMA3B-207ENST00000441915 PAK5Q9P286 719 aa17.19■□□□□ 0.34
SEMA3B-207ENST00000441915 LRRC42Q9Y546 428 aa17.19■□□□□ 0.34
SEMA3B-207ENST00000441915 H0Y3Z8 333 aa17.19■□□□□ 0.34
SEMA3B-207ENST00000441915 PRPSAP2O60256 369 aa17.19■□□□□ 0.34
SEMA3B-207ENST00000441915 GJB1P08034 283 aa17.19■□□□□ 0.34
SEMA3B-207ENST00000441915 SERPINB3P29508 390 aa17.19■□□□□ 0.34
SEMA3B-207ENST00000441915 SH2D5Q6ZV89 423 aa17.19■□□□□ 0.34
SEMA3B-207ENST00000441915 SLC26A11Q86WA9 606 aa17.19■□□□□ 0.34
SEMA3B-207ENST00000441915 MAP7D3Q8IWC1 876 aa17.19■□□□□ 0.34
SEMA3B-207ENST00000441915 HEXIM2Q96MH2 286 aaKnown RBP17.19■□□□□ 0.34
SEMA3B-207ENST00000441915 MIPEPQ99797 713 aa17.19■□□□□ 0.34
SEMA3B-207ENST00000441915 TMEM120AQ9BXJ8 343 aa17.19■□□□□ 0.34
SEMA3B-207ENST00000441915 TNFSF13BQ9Y275 285 aa17.19■□□□□ 0.34
SEMA3B-207ENST00000441915 DNAJC6O75061 913 aa17.18■□□□□ 0.34
SEMA3B-207ENST00000441915 AVILO75366 819 aa17.18■□□□□ 0.34
SEMA3B-207ENST00000441915 ANK1P16157 1881 aa17.18■□□□□ 0.34
SEMA3B-207ENST00000441915 PDGFRAP16234 1089 aa17.18■□□□□ 0.34
SEMA3B-207ENST00000441915 BGNP21810 368 aa17.18■□□□□ 0.34
SEMA3B-207ENST00000441915 CDK16Q00536 496 aa17.18■□□□□ 0.34
SEMA3B-207ENST00000441915 SH3PXD2AQ5TCZ1 1133 aa17.18■□□□□ 0.34
SEMA3B-207ENST00000441915 TTC39BQ5VTQ0 682 aaPredicted RBP17.18■□□□□ 0.34
SEMA3B-207ENST00000441915 PLPPR4Q7Z2D5 763 aa17.18■□□□□ 0.34
SEMA3B-207ENST00000441915 CTAGE3PQ8IX95 158 aa17.18■□□□□ 0.34
SEMA3B-207ENST00000441915 TTC8Q8TAM2 541 aa17.18■□□□□ 0.34
SEMA3B-207ENST00000441915 NSL1Q96IY1 281 aa17.18■□□□□ 0.34
SEMA3B-207ENST00000441915 CADM1Q9BY67 442 aaKnown RBP17.18■□□□□ 0.34
SEMA3B-207ENST00000441915 FRMD8Q9BZ67 464 aaPredicted RBP17.18■□□□□ 0.34
SEMA3B-207ENST00000441915 COPEO14579 308 aa17.18■□□□□ 0.34
SEMA3B-207ENST00000441915 DLDP09622 509 aaKnown RBP17.18■□□□□ 0.34
SEMA3B-207ENST00000441915 VDRP11473 427 aa17.18■□□□□ 0.34
SEMA3B-207ENST00000441915 P4HA1P13674 534 aa17.18■□□□□ 0.34
SEMA3B-207ENST00000441915 PRKG1Q13976 671 aa17.18■□□□□ 0.34
SEMA3B-207ENST00000441915 NOL9Q5SY16 702 aaKnown RBP17.18■□□□□ 0.34
SEMA3B-207ENST00000441915 TREML2Q5T2D2 321 aa17.18■□□□□ 0.34
SEMA3B-207ENST00000441915 C1orf228Q6PIY5 440 aa17.18■□□□□ 0.34
SEMA3B-207ENST00000441915 C4orf50Q6ZRC1 276 aa17.18■□□□□ 0.34
SEMA3B-207ENST00000441915 UBA3Q8TBC4 463 aa17.18■□□□□ 0.34
SEMA3B-207ENST00000441915 RXFP2Q8WXD0 754 aa17.18■□□□□ 0.34
SEMA3B-207ENST00000441915 RNF157Q96PX1 679 aa17.18■□□□□ 0.34
SEMA3B-207ENST00000441915 KCNK13Q9HB14 408 aa17.18■□□□□ 0.34
SEMA3B-207ENST00000441915 CYP3A43Q9HB55 503 aa17.18■□□□□ 0.34
SEMA3B-207ENST00000441915 PNPLA8Q9NP80 782 aa17.18■□□□□ 0.34
SEMA3B-207ENST00000441915 MGAMO43451 1857 aa17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 LACTBL1A8MY62 500 aa17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 LGR5O75473 907 aa17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 KRT37O76014 449 aa17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 ARIH2O95376 493 aa17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 CDC25CP30307 473 aa17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 SERPINB4P48594 390 aa17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 KRT81Q14533 505 aa17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 CDO1Q16878 200 aa17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.17■□□□□ 0.344e-10■□□□□ 10
SEMA3B-207ENST00000441915 TRAPPC12Q8WVT3 735 aa17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 SKA1Q96BD8 255 aa17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 CFAP36Q96G28 342 aa17.17■□□□□ 0.34
SEMA3B-207ENST00000441915 MIS12Q9H081 205 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms