RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 PEAR1Q5VY43 1037 aaPredicted RBP6.89□□□□□ -1.31
HDAC6-210ENST00000441703 PAPD7Q5XG87 772 aaKnown RBP6.89□□□□□ -1.31
HDAC6-210ENST00000441703 TRIM68Q6AZZ1 485 aa6.89□□□□□ -1.31
HDAC6-210ENST00000441703 C6orf89Q6UWU4 347 aa6.89□□□□□ -1.31
HDAC6-210ENST00000441703 RAD9BQ6WBX8 426 aa6.89□□□□□ -1.31
HDAC6-210ENST00000441703 TRAPPC11Q7Z392 1133 aa6.89□□□□□ -1.31
HDAC6-210ENST00000441703 CDR2LQ86X02 465 aaPredicted RBP6.89□□□□□ -1.31
HDAC6-210ENST00000441703 RGL4Q8IZJ4 473 aa6.89□□□□□ -1.31
HDAC6-210ENST00000441703 DAGLBQ8NCG7 672 aa6.89□□□□□ -1.31
HDAC6-210ENST00000441703 N4BP2L2Q92802 583 aaPredicted RBP6.89□□□□□ -1.31
HDAC6-210ENST00000441703 TATDN2Q93075 761 aa6.89□□□□□ -1.31
HDAC6-210ENST00000441703 GJA10Q969M2 543 aa6.89□□□□□ -1.31
HDAC6-210ENST00000441703 CHFRQ96EP1 664 aa6.89□□□□□ -1.31
HDAC6-210ENST00000441703 CEP170P1Q96L14 293 aa6.89□□□□□ -1.31
HDAC6-210ENST00000441703 UROC1Q96N76 676 aa6.89□□□□□ -1.31
HDAC6-210ENST00000441703 FNBP1Q96RU3 617 aa6.89□□□□□ -1.31
HDAC6-210ENST00000441703 LRRC2Q9BYS8 371 aa6.89□□□□□ -1.31
HDAC6-210ENST00000441703 PRDM16Q9HAZ2 1276 aa6.89□□□□□ -1.31
HDAC6-210ENST00000441703 HPS4Q9NQG7 708 aa6.89□□□□□ -1.31
HDAC6-210ENST00000441703 HOMER3Q9NSC5 361 aa6.89□□□□□ -1.31
HDAC6-210ENST00000441703 KCNK4Q9NYG8 393 aa6.89□□□□□ -1.31
HDAC6-210ENST00000441703 IL17BQ9UHF5 180 aa6.89□□□□□ -1.31
HDAC6-210ENST00000441703 PCOLCE2Q9UKZ9 415 aa6.89□□□□□ -1.31
HDAC6-210ENST00000441703 MAFFQ9ULX9 164 aa6.89□□□□□ -1.31
HDAC6-210ENST00000441703 SRPK3Q9UPE1 567 aa6.89□□□□□ -1.31
HDAC6-210ENST00000441703 YIPF1Q9Y548 306 aa6.89□□□□□ -1.31
HDAC6-210ENST00000441703 CLIC4Q9Y696 253 aa6.89□□□□□ -1.31
HDAC6-210ENST00000441703 AK5Q9Y6K8 562 aa6.89□□□□□ -1.31
HDAC6-210ENST00000441703 ITIH6Q6UXX5 1313 aa6.89□□□□□ -1.31
HDAC6-210ENST00000441703 MUC22E2RYF6 1773 aaPredicted RBP6.89□□□□□ -1.31
HDAC6-210ENST00000441703 TNRC6BQ9UPQ9 1833 aaKnown RBP6.89□□□□□ -1.31
HDAC6-210ENST00000441703 COL6A6A6NMZ7 2263 aa6.89□□□□□ -1.31
HDAC6-210ENST00000441703 KALRNO60229 2985 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 GOLGA6BA6NDN3 693 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 GOLGA8AA7E2F4 631 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 GOLGA8BA8MQT2 603 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 MYO1FO00160 1098 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 PLK4O00444 970 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 PTGESO14684 152 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 MARCH6O60337 910 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 PRAMEF12O95522 483 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 NEFHP12036 1026 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 GP1BBP13224 206 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 GABRR2P28476 465 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 ALDH1A3P47895 512 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 QARSP47897 775 aaKnown RBP6.88□□□□□ -1.31
HDAC6-210ENST00000441703 CLCNKBP51801 687 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 NAP1L1P55209 391 aaKnown RBP6.88□□□□□ -1.31
HDAC6-210ENST00000441703 SEC13P55735 322 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 RWDD2BP57060 319 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 BFSP1Q12934 665 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 BIRC2Q13490 618 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 CAMK2BQ13554 666 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 NAB2Q15742 525 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 SNCBQ16143 134 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 PLEKHG6Q3KR16 790 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 RESP18Q5W5W9 173 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 ZNF280DQ6N043 979 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 CCDC70Q6NSX1 233 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 PCSK4Q6UW60 755 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 SLC36A4Q6YBV0 504 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 KIAA1328Q86T90 577 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 TMC8Q8IU68 726 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 CNGA4Q8IV77 575 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 CPA6Q8N4T0 437 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 MMGT1Q8N4V1 131 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 DEFB119Q8N690 84 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 NOA1Q8NC60 698 aaKnown RBP6.88□□□□□ -1.31
HDAC6-210ENST00000441703 OLIG1Q8TAK6 271 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 ETNPPLQ8TBG4 499 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 AENQ8WTP8 325 aaKnown RBP6.88□□□□□ -1.31
HDAC6-210ENST00000441703 P3H4Q92791 437 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 ITFG2Q969R8 447 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 TCEANC2Q96MN5 208 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 MTRQ99707 1265 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 CDC6Q99741 560 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 DESI2Q9BSY9 194 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 POLR3CQ9BUI4 534 aaPredicted RBP6.88□□□□□ -1.31
HDAC6-210ENST00000441703 NFKBIZQ9BYH8 718 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 IRX2Q9BZI1 471 aaPredicted RBP6.88□□□□□ -1.31
HDAC6-210ENST00000441703 TRIM4Q9C037 500 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 FAM117AQ9C073 453 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 EPN3Q9H201 632 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 TASP1Q9H6P5 420 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 FBRSL1Q9HCM7 1045 aaKnown RBP6.88□□□□□ -1.31
HDAC6-210ENST00000441703 ANKMY1Q9P2S6 941 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 SUSD2Q9UGT4 822 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 FBXL5Q9UKA1 691 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 PTPN13Q12923 2485 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 CITO14578 2027 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 PCDH15Q96QU1 1955 aa6.88□□□□□ -1.31
HDAC6-210ENST00000441703 PIEZO2Q9H5I5 2752 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 NID2Q14112 1375 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 GOLGA4Q13439 2230 aaKnown RBP6.87□□□□□ -1.31
HDAC6-210ENST00000441703 CYP3A7-CYP3A51PA0A087WV96 503 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 SOWAHDA6NJG2 315 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 NDUFAB1O14561 156 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 SYN3O14994 580 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 TBX3O15119 743 aa6.87□□□□□ -1.31
HDAC6-210ENST00000441703 B4GALT5O43286 388 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms