RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 SULT1E1P49888 294 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 SLC25A11Q02978 314 aaKnown RBP6.3□□□□□ -1.4
VPS50-205ENST00000441602 DHX9Q08211 1270 aaKnown RBP6.3□□□□□ -1.4
VPS50-205ENST00000441602 ZNF252P-AS1Q0IIN9 211 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 CDO1Q16878 200 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 ARL13BQ3SXY8 428 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 TIGD5Q53EQ6 642 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 DENND2CQ68D51 928 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 CDKL3Q8IVW4 592 aaPredicted RBP6.3□□□□□ -1.4
VPS50-205ENST00000441602 CMASQ8NFW8 434 aaPredicted RBP6.3□□□□□ -1.4
VPS50-205ENST00000441602 NKD2Q969F2 451 aaPredicted RBP6.3□□□□□ -1.4
VPS50-205ENST00000441602 DEFB118Q96PH6 123 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 CCDC77Q9BR77 488 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 KLHL11Q9NVR0 708 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 MIOSQ9NXC5 875 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 BHMG1C9JSJ3 638 aaPredicted RBP6.3□□□□□ -1.4
VPS50-205ENST00000441602 M0QZQ0 153 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 SYN3O14994 580 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 MDM4O15151 490 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 CST8O60676 142 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 SASH3O75995 380 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 STK10O94804 968 aaKnown RBP6.3□□□□□ -1.4
VPS50-205ENST00000441602 MYBL2P10244 700 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 CCL5P13501 91 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 MATKP42679 507 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 CDKN2BP42772 138 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 OR1G1P47890 313 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 RPL34P49207 117 aaKnown RBP6.3□□□□□ -1.4
VPS50-205ENST00000441602 AIF1P55008 147 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 YWHAZP63104 245 aaKnown RBP6.3□□□□□ -1.4
VPS50-205ENST00000441602 MRPS5P82675 430 aaKnown RBP6.3□□□□□ -1.4
VPS50-205ENST00000441602 ATP11AP98196 1134 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 YWHAHQ04917 246 aaPredicted RBP6.3□□□□□ -1.4
VPS50-205ENST00000441602 ADIGQ0VDE8 80 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 SIX1Q15475 284 aaPredicted RBP6.3□□□□□ -1.4
VPS50-205ENST00000441602 PPP1R21Q6ZMI0 780 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 TRMT10CQ7L0Y3 403 aaKnown RBP6.3□□□□□ -1.4
VPS50-205ENST00000441602 FUKQ8N0W3 1084 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 SH3TC2Q8TF17 1288 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 GDAP1L1Q96MZ0 367 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 CXCL16Q9H2A7 254 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 PCDH9Q9HC56 1237 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 PNPLA8Q9NP80 782 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 RCOR3Q9P2K3 495 aaPredicted RBP6.3□□□□□ -1.4
VPS50-205ENST00000441602 OR6C75A6NL08 312 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 H7C0C1 242 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 APOC4-APOC2K7ER74 178 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 SGK1O00141 431 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 POLR3GO15318 223 aaPredicted RBP6.29□□□□□ -1.4
VPS50-205ENST00000441602 LIASO43766 372 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 GRAP2O75791 330 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 APOC2P02655 101 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 IVLP07476 585 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 MYZAPP0CAP1 466 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 FLT3P36888 993 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 ATP5OP48047 213 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 CDK7P50613 346 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 TKTL1P51854 596 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 KLF1Q13351 362 aaPredicted RBP6.29□□□□□ -1.4
VPS50-205ENST00000441602 EFHC2Q5JST6 749 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 ZNF280DQ6N043 979 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 SCUBE3Q8IX30 993 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 FAM126BQ8IXS8 530 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 ARHGAP18Q8N392 663 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 TMEM130Q8N3G9 435 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 FAM76AQ8TAV0 307 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 P3H4Q92791 437 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 MYLPFQ96A32 169 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 HINFPQ9BQA5 517 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 ZNF670Q9BS34 389 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 TMEM175Q9BSA9 504 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 B3GNT5Q9BYG0 378 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 CHST7Q9NS84 486 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.29□□□□□ -1.4
VPS50-205ENST00000441602 TJP2Q9UDY2 1190 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 NR2E1Q9Y466 385 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 ZSCAN5CA6NGD5 496 aaPredicted RBP6.29□□□□□ -1.4
VPS50-205ENST00000441602 PIK3R2O00459 728 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 ITGAVP06756 1048 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 KRT10P13645 584 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 STIP1P31948 543 aaKnown RBP6.29□□□□□ -1.4
VPS50-205ENST00000441602 RFC2P35250 354 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 KCNJ1P48048 391 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 PMS2P54278 862 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 BCAR1P56945 870 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 MAP3K7CLP57077 242 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 EIF3EP60228 445 aaKnown RBP6.29□□□□□ -1.4
VPS50-205ENST00000441602 ROR1Q01973 937 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 DEUP1Q05D60 604 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 SMARCB1Q12824 385 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 CCDC14Q49A88 953 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 ERMARDQ5T6L9 678 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 IZUMO3Q5VZ72 239 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 TTC27Q6P3X3 843 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 DDX42Q86XP3 938 aaKnown RBP eCLIP6.29□□□□□ -1.4
VPS50-205ENST00000441602 NPAS4Q8IUM7 802 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 SCML4Q8N228 414 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 GSTCDQ8NEC7 633 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 RAPGEF5Q92565 580 aa6.29□□□□□ -1.4
VPS50-205ENST00000441602 POPDC2Q9HBU9 364 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms