RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 ZRSR1Q15695 479 aaKnown RBP11.01□□□□□ -0.65
SYNE2-206ENST00000441438 THEMIS2Q5TEJ8 643 aa11.01□□□□□ -0.65
SYNE2-206ENST00000441438 PRPF40BQ6NWY9 871 aaKnown RBP11.01□□□□□ -0.65
SYNE2-206ENST00000441438 ERICH5Q6P6B1 374 aa11.01□□□□□ -0.65
SYNE2-206ENST00000441438 C16orf59Q7L2K0 433 aa11.01□□□□□ -0.65
SYNE2-206ENST00000441438 SLFN11Q7Z7L1 901 aa11.01□□□□□ -0.65
SYNE2-206ENST00000441438 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.01□□□□□ -0.65
SYNE2-206ENST00000441438 PHC2Q8IXK0 858 aa11.01□□□□□ -0.65
SYNE2-206ENST00000441438 FAM13CQ8NE31 585 aa11.01□□□□□ -0.65
SYNE2-206ENST00000441438 PPP1R35Q8TAP8 253 aa11.01□□□□□ -0.65
SYNE2-206ENST00000441438 EXT2Q93063 718 aa11.01□□□□□ -0.65
SYNE2-206ENST00000441438 INTS4Q96HW7 963 aaKnown RBP11.01□□□□□ -0.65
SYNE2-206ENST00000441438 PGBD1Q96JS3 809 aa11.01□□□□□ -0.65
SYNE2-206ENST00000441438 EGLN2Q96KS0 407 aa11.01□□□□□ -0.65
SYNE2-206ENST00000441438 NFKBIZQ9BYH8 718 aa11.01□□□□□ -0.65
SYNE2-206ENST00000441438 AP5M1Q9H0R1 490 aa11.01□□□□□ -0.65
SYNE2-206ENST00000441438 DECR2Q9NUI1 292 aa11.01□□□□□ -0.65
SYNE2-206ENST00000441438 PCDHGB2Q9Y5G2 931 aa11.01□□□□□ -0.65
SYNE2-206ENST00000441438 TRAF5O00463 557 aa11.01□□□□□ -0.65
SYNE2-206ENST00000441438 USP17L7P0C7H9 530 aa11.01□□□□□ -0.65
SYNE2-206ENST00000441438 IRS1P35568 1242 aa11.01□□□□□ -0.65
SYNE2-206ENST00000441438 MTHFSDQ2M296 383 aaKnown RBP11.01□□□□□ -0.65
SYNE2-206ENST00000441438 TMEM240Q5SV17 173 aa11.01□□□□□ -0.65
SYNE2-206ENST00000441438 C6orf15Q6UXA7 325 aaPredicted RBP11.01□□□□□ -0.65
SYNE2-206ENST00000441438 TRMT44Q8IYL2 757 aaKnown RBP11.01□□□□□ -0.65
SYNE2-206ENST00000441438 GATAD2BQ8WXI9 593 aa11.01□□□□□ -0.65
SYNE2-206ENST00000441438 FRMD8P1Q9BZ68 369 aaPredicted RBP11.01□□□□□ -0.65
SYNE2-206ENST00000441438 ZSCAN16Q9H4T2 348 aaPredicted RBP11.01□□□□□ -0.65
SYNE2-206ENST00000441438 LRFN2Q9ULH4 789 aa11.01□□□□□ -0.65
SYNE2-206ENST00000441438 GAB2Q9UQC2 676 aa11.01□□□□□ -0.65
SYNE2-206ENST00000441438 TRPV2Q9Y5S1 764 aa11.01□□□□□ -0.65
SYNE2-206ENST00000441438 NDUFS8O00217 210 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 APBA3O96018 575 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 GALP22466 123 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 ALDH3A1P30838 453 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 PRSS12P56730 875 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 MAP4K2Q12851 820 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 PTPAQ15257 358 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 RTP2Q5QGT7 225 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 CENPPQ6IPU0 288 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 KAT2BQ92831 832 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 HDAC10Q969S8 669 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 PLIN2Q99541 437 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 CARD6Q9BX69 1037 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 CLEC11AQ9Y240 323 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 KIAA1217Q5T5P2 1943 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 ARHGEF37A1IGU5 675 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 DTNBO60941 627 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 STAT5BP51692 787 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 GBX2P52951 348 aaPredicted RBP11□□□□□ -0.65
SYNE2-206ENST00000441438 HUNKP57058 714 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 TSTQ16762 297 aaKnown RBP11□□□□□ -0.65
SYNE2-206ENST00000441438 RFX8Q6ZV50 586 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 RILPL2Q969X0 211 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 TTC1Q99614 292 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 AZI2Q9H6S1 392 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 VANGL2Q9ULK5 521 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 NSFL1CQ9UNZ2 370 aaKnown RBP11□□□□□ -0.65
SYNE2-206ENST00000441438 DERAQ9Y315 318 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 DLEC1Q9Y238 1755 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 TUBGCP6Q96RT7 1819 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 MAN1A2O60476 641 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 APOEP02649 317 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 ANPEPP15144 967 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 GPTP24298 496 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 EIF3EP60228 445 aaKnown RBP11□□□□□ -0.65
SYNE2-206ENST00000441438 GSTM4Q03013 218 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 DGKKQ5KSL6 1271 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 PGM2L1Q6PCE3 622 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 ZNF765Q7L2R6 523 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 CDH24Q86UP0 819 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 CACNA2D3Q8IZS8 1091 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 SLC26A7Q8TE54 656 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 TSNARE1Q96NA8 513 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 BTBD2Q9BX70 525 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 MAGEH1Q9H213 219 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 MRPL40Q9NQ50 206 aaKnown RBP11□□□□□ -0.65
SYNE2-206ENST00000441438 GMIPQ9P107 970 aa11□□□□□ -0.65
SYNE2-206ENST00000441438 SUCLA2Q9P2R7 463 aaPredicted RBP11□□□□□ -0.65
SYNE2-206ENST00000441438 LAMB2P55268 1798 aa10.99□□□□□ -0.65
SYNE2-206ENST00000441438 GOLGA6L9A6NEM1 432 aa10.99□□□□□ -0.65
SYNE2-206ENST00000441438 CAPN8A6NHC0 703 aa10.99□□□□□ -0.65
SYNE2-206ENST00000441438 NT5C1B-RDH14C9J2C7 533 aa10.99□□□□□ -0.65
SYNE2-206ENST00000441438 RAD51BO15315 384 aa10.99□□□□□ -0.65
SYNE2-206ENST00000441438 SCAF4O95104 1147 aaKnown RBP10.99□□□□□ -0.65
SYNE2-206ENST00000441438 GPC1P35052 558 aa10.99□□□□□ -0.65
SYNE2-206ENST00000441438 TPM4P67936 248 aa10.99□□□□□ -0.65
SYNE2-206ENST00000441438 KRT17Q04695 432 aa10.99□□□□□ -0.65
SYNE2-206ENST00000441438 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.99□□□□□ -0.65
SYNE2-206ENST00000441438 THAP5Q7Z6K1 395 aa10.99□□□□□ -0.65
SYNE2-206ENST00000441438 ZGPATQ8N5A5 531 aaKnown RBP10.99□□□□□ -0.65
SYNE2-206ENST00000441438 MAIP1Q8WWC4 291 aa10.99□□□□□ -0.65
SYNE2-206ENST00000441438 TMEM68Q96MH6 324 aa10.99□□□□□ -0.65
SYNE2-206ENST00000441438 NT5C1AQ9BXI3 368 aa10.99□□□□□ -0.65
SYNE2-206ENST00000441438 AXIN1O15169 862 aa10.99□□□□□ -0.65
SYNE2-206ENST00000441438 TRAPPC3O43617 180 aa10.99□□□□□ -0.65
SYNE2-206ENST00000441438 BUB1O43683 1085 aa10.99□□□□□ -0.65
SYNE2-206ENST00000441438 IVLP07476 585 aa10.99□□□□□ -0.65
SYNE2-206ENST00000441438 CHN1P15882 459 aa10.99□□□□□ -0.65
SYNE2-206ENST00000441438 IFNAR1P17181 557 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms