RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 SMARCAD1Q9H4L7 1026 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 LMAN1LQ9HAT1 526 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 HEBP1Q9NRV9 189 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 KCNH7Q9NS40 1196 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 ST3GAL5Q9UNP4 418 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 GINS2Q9Y248 185 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 NOC2LQ9Y3T9 749 aaKnown RBP5.24□□□□□ -1.57
PTPN4-206ENST00000441089 PCDHA2Q9Y5H9 948 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 KNL1Q8NG31 2342 aa5.24□□□□□ -1.57
PTPN4-206ENST00000441089 BOD1L1Q8NFC6 3051 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 CABIN1Q9Y6J0 2220 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 A0A087WWV3 80 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 SYCE3A1L190 88 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 K7ESF4 209 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 DDX39AO00148 427 aaKnown RBP5.23□□□□□ -1.57
PTPN4-206ENST00000441089 IPO5O00410 1097 aaKnown RBP5.23□□□□□ -1.57
PTPN4-206ENST00000441089 POLR2DO15514 142 aaKnown RBP5.23□□□□□ -1.57
PTPN4-206ENST00000441089 MED24O75448 989 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 RPP40O75818 363 aaKnown RBP5.23□□□□□ -1.57
PTPN4-206ENST00000441089 CCNE2O96020 404 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 URODP06132 367 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 CCDC192P0DO97 292 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 INSRRP14616 1297 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 PLCG1P19174 1290 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 HOXA5P20719 270 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 MARK3P27448 753 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 CASP1P29466 404 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 NTF4P34130 210 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 SIM1P81133 766 aaPredicted RBP5.23□□□□□ -1.57
PTPN4-206ENST00000441089 SP4Q02446 784 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 PPP2R5CQ13362 524 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 PDIA5Q14554 519 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 ELF2Q15723 593 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 CAMK4Q16566 473 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 ZSCAN23Q3MJ62 389 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 TMEM119Q4V9L6 283 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 CLLU1OSQ5K130 101 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 HYIQ5T013 277 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 LRCH2Q5VUJ6 765 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 NCAPH2Q6IBW4 605 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 C1orf228Q6PIY5 440 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 KRBA2Q6ZNG9 492 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 RBM43Q6ZSC3 357 aaKnown RBP5.23□□□□□ -1.57
PTPN4-206ENST00000441089 NLRX1Q86UT6 975 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 GAS2L3Q86XJ1 694 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 ECHDC2Q86YB7 292 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 SLFN12Q8IYM2 578 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 DEFB124Q8NES8 71 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 GPRASP2Q96D09 838 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 KIRREL1Q96J84 757 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 ZC3H10Q96K80 434 aaKnown RBP5.23□□□□□ -1.57
PTPN4-206ENST00000441089 AK8Q96MA6 479 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 RIT2Q99578 217 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 FUCA2Q9BTY2 467 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 TEKT3Q9BXF9 490 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 NUP62CLQ9H1M0 184 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 BLOC1S4Q9NUP1 217 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 DDX19AQ9NUU7 478 aaKnown RBP5.23□□□□□ -1.57
PTPN4-206ENST00000441089 RNF19AQ9NV58 838 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 WRAP73Q9P2S5 460 aaPredicted RBP5.23□□□□□ -1.57
PTPN4-206ENST00000441089 DKK4Q9UBT3 224 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 PCDHA12Q9UN75 941 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 SAMM50Q9Y512 469 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 SNX11Q9Y5W9 270 aa5.23□□□□□ -1.57
PTPN4-206ENST00000441089 LNP1A1A4G5 178 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 ENC1O14682 589 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 CHMP2AO43633 222 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 MARCH6O60337 910 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 GAS7O60861 476 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 ECI2O75521 394 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 CAVIN2O95810 425 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 GALTP07902 379 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 ZNF445P59923 1031 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 CYP4A11Q02928 519 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 RNASELQ05823 741 aaKnown RBP5.22□□□□□ -1.57
PTPN4-206ENST00000441089 CTTNQ14247 550 aaKnown RBP5.22□□□□□ -1.57
PTPN4-206ENST00000441089 ZRSR1Q15695 479 aaKnown RBP5.22□□□□□ -1.57
PTPN4-206ENST00000441089 UGCGQ16739 394 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 ZC3H12AQ5D1E8 599 aaKnown RBP5.22□□□□□ -1.57
PTPN4-206ENST00000441089 SCARA3Q6AZY7 606 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 TCEAL6Q6IPX3 200 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 MPZL3Q6UWV2 235 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 KBTBD6Q86V97 674 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 TMEM173Q86WV6 379 aaPredicted RBP5.22□□□□□ -1.57
PTPN4-206ENST00000441089 CATSPER3Q86XQ3 398 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 CKAP2LQ8IYA6 745 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 CHCHD4Q8N4Q1 142 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 RNF169Q8NCN4 708 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 RNF214Q8ND24 703 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 CNNM3Q8NE01 707 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 ST13P5Q8NFI4 369 aaPredicted RBP5.22□□□□□ -1.57
PTPN4-206ENST00000441089 GPBAR1Q8TDU6 330 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 SEPT1Q8WYJ6 367 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 FAM3CQ92520 227 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 FGF13Q92913 245 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 TCEAL3Q969E4 200 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 PAGE5Q96GU1 130 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 MSANTD3Q96H12 275 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 DYDC2Q96IM9 177 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 TIGD1Q96MW7 591 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms