RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 P4HA1P13674 534 aa12.34□□□□□ -0.43
UBE2D4-204ENST00000440899 EIF2DP41214 584 aaKnown RBP12.34□□□□□ -0.43
UBE2D4-204ENST00000440899 SEC13P55735 322 aa12.34□□□□□ -0.43
UBE2D4-204ENST00000440899 DNM1Q05193 864 aaKnown RBP12.34□□□□□ -0.43
UBE2D4-204ENST00000440899 SGSM1Q2NKQ1 1148 aa12.34□□□□□ -0.43
UBE2D4-204ENST00000440899 HECTD3Q5T447 861 aa12.34□□□□□ -0.43
UBE2D4-204ENST00000440899 SNX30Q5VWJ9 437 aa12.34□□□□□ -0.43
UBE2D4-204ENST00000440899 RHBDF2Q6PJF5 856 aa12.34□□□□□ -0.43
UBE2D4-204ENST00000440899 PAQR9Q6ZVX9 377 aa12.34□□□□□ -0.43
UBE2D4-204ENST00000440899 FAM35AQ86V20 835 aa12.34□□□□□ -0.43
UBE2D4-204ENST00000440899 C11orf74Q86VG3 221 aa12.34□□□□□ -0.43
UBE2D4-204ENST00000440899 TAF4BQ92750 862 aa12.34□□□□□ -0.43
UBE2D4-204ENST00000440899 OTUB2Q96DC9 234 aa12.34□□□□□ -0.43
UBE2D4-204ENST00000440899 SMARCD1Q96GM5 515 aa12.34□□□□□ -0.43
UBE2D4-204ENST00000440899 PAGE5Q96GU1 130 aa12.34□□□□□ -0.43
UBE2D4-204ENST00000440899 DMAP1Q9NPF5 467 aaPredicted RBP12.34□□□□□ -0.43
UBE2D4-204ENST00000440899 COMMD8Q9NX08 183 aa12.34□□□□□ -0.43
UBE2D4-204ENST00000440899 IL37Q9NZH6 218 aa12.34□□□□□ -0.43
UBE2D4-204ENST00000440899 CHORDC1Q9UHD1 332 aaPredicted RBP12.34□□□□□ -0.43
UBE2D4-204ENST00000440899 USP25Q9UHP3 1055 aa12.34□□□□□ -0.43
UBE2D4-204ENST00000440899 CACNA1BQ00975 2339 aa12.34□□□□□ -0.43
UBE2D4-204ENST00000440899 PTPRDP23468 1912 aa12.33□□□□□ -0.44
UBE2D4-204ENST00000440899 A0A0A0MRY4 1105 aa12.33□□□□□ -0.44
UBE2D4-204ENST00000440899 IKBKBO14920 756 aa12.33□□□□□ -0.44
UBE2D4-204ENST00000440899 AP1G2O75843 785 aa12.33□□□□□ -0.44
UBE2D4-204ENST00000440899 ALDH1A2O94788 518 aa12.33□□□□□ -0.44
UBE2D4-204ENST00000440899 KAT7O95251 611 aa12.33□□□□□ -0.44
UBE2D4-204ENST00000440899 VNN1O95497 513 aa12.33□□□□□ -0.44
UBE2D4-204ENST00000440899 APODP05090 189 aa12.33□□□□□ -0.44
UBE2D4-204ENST00000440899 MYL1P05976 194 aa12.33□□□□□ -0.44
UBE2D4-204ENST00000440899 GBP1P32455 592 aa12.33□□□□□ -0.44
UBE2D4-204ENST00000440899 SLC6A11P48066 632 aa12.33□□□□□ -0.44
UBE2D4-204ENST00000440899 TUBP50607 506 aa12.33□□□□□ -0.44
UBE2D4-204ENST00000440899 SLC5A3P53794 718 aa12.33□□□□□ -0.44
UBE2D4-204ENST00000440899 CRY1Q16526 586 aa12.33□□□□□ -0.44
UBE2D4-204ENST00000440899 ZACNQ401N2 412 aa12.33□□□□□ -0.44
UBE2D4-204ENST00000440899 KMT5BQ4FZB7 885 aa12.33□□□□□ -0.44
UBE2D4-204ENST00000440899 HSF5Q4G112 596 aaPredicted RBP12.33□□□□□ -0.44
UBE2D4-204ENST00000440899 STPG1Q5TH74 334 aa12.33□□□□□ -0.44
UBE2D4-204ENST00000440899 SCARA5Q6ZMJ2 495 aa12.33□□□□□ -0.44
UBE2D4-204ENST00000440899 ACOT1Q86TX2 421 aa12.33□□□□□ -0.44
UBE2D4-204ENST00000440899 RASSF3Q86WH2 238 aa12.33□□□□□ -0.44
UBE2D4-204ENST00000440899 FUKQ8N0W3 1084 aa12.33□□□□□ -0.44
UBE2D4-204ENST00000440899 CRYBG2Q8N1P7 616 aa12.33□□□□□ -0.44
UBE2D4-204ENST00000440899 CCDC33Q8N5R6 958 aa12.33□□□□□ -0.44
UBE2D4-204ENST00000440899 KIAA0895Q8NCT3 520 aa12.33□□□□□ -0.44
UBE2D4-204ENST00000440899 SCAMP5Q8TAC9 235 aa12.33□□□□□ -0.44
UBE2D4-204ENST00000440899 TMC2Q8TDI7 906 aa12.33□□□□□ -0.44
UBE2D4-204ENST00000440899 SDCBP2Q9H190 292 aa12.33□□□□□ -0.44
UBE2D4-204ENST00000440899 KCTD10Q9H3F6 313 aa12.33□□□□□ -0.44
UBE2D4-204ENST00000440899 SMOC1Q9H4F8 434 aa12.33□□□□□ -0.44
UBE2D4-204ENST00000440899 RXFP3Q9NSD7 469 aa12.33□□□□□ -0.44
UBE2D4-204ENST00000440899 FAM92AA1XBS5 289 aa12.32□□□□□ -0.44
UBE2D4-204ENST00000440899 BCLAF3A2AJT9 711 aaKnown RBP12.32□□□□□ -0.44
UBE2D4-204ENST00000440899 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.32□□□□□ -0.44
UBE2D4-204ENST00000440899 SCAMP3O14828 347 aaKnown RBP12.32□□□□□ -0.44
UBE2D4-204ENST00000440899 CAVIN2O95810 425 aa12.32□□□□□ -0.44
UBE2D4-204ENST00000440899 NR3C1P04150 777 aa12.32□□□□□ -0.44
UBE2D4-204ENST00000440899 ZDHHC11BP0C7U3 371 aa12.32□□□□□ -0.44
UBE2D4-204ENST00000440899 ADH5P11766 374 aa12.32□□□□□ -0.44
UBE2D4-204ENST00000440899 CMA1P23946 247 aa12.32□□□□□ -0.44
UBE2D4-204ENST00000440899 GRIA2P42262 883 aa12.32□□□□□ -0.44
UBE2D4-204ENST00000440899 TNFRSF4P43489 277 aa12.32□□□□□ -0.44
UBE2D4-204ENST00000440899 DLG4P78352 724 aa12.32□□□□□ -0.44
UBE2D4-204ENST00000440899 CREB5Q02930 508 aa12.32□□□□□ -0.44
UBE2D4-204ENST00000440899 PKP1Q13835 747 aa12.32□□□□□ -0.44
UBE2D4-204ENST00000440899 LY6G5CQ5SRR4 150 aa12.32□□□□□ -0.44
UBE2D4-204ENST00000440899 ANO7Q6IWH7 933 aa12.32□□□□□ -0.44
UBE2D4-204ENST00000440899 SV2AQ7L0J3 742 aa12.32□□□□□ -0.44
UBE2D4-204ENST00000440899 UNC93AQ86WB7 457 aa12.32□□□□□ -0.44
UBE2D4-204ENST00000440899 ELMO3Q96BJ8 720 aa12.32□□□□□ -0.44
UBE2D4-204ENST00000440899 ZFRQ96KR1 1074 aaKnown RBP12.32□□□□□ -0.44
UBE2D4-204ENST00000440899 CNOT6LQ96LI5 555 aaKnown RBP12.32□□□□□ -0.44
UBE2D4-204ENST00000440899 DUSP9Q99956 384 aaKnown RBP12.32□□□□□ -0.44
UBE2D4-204ENST00000440899 TPSD1Q9BZJ3 242 aa12.32□□□□□ -0.44
UBE2D4-204ENST00000440899 FBXO44Q9H4M3 255 aa12.32□□□□□ -0.44
UBE2D4-204ENST00000440899 CCSER2Q9H7U1 834 aa12.32□□□□□ -0.44
UBE2D4-204ENST00000440899 ARHGEF4Q9NR80 690 aa12.32□□□□□ -0.44
UBE2D4-204ENST00000440899 INVSQ9Y283 1065 aa12.32□□□□□ -0.44
UBE2D4-204ENST00000440899 FRMD4BQ9Y2L6 1034 aa12.32□□□□□ -0.44
UBE2D4-204ENST00000440899 SH3BP1Q9Y3L3 701 aa12.32□□□□□ -0.44
UBE2D4-204ENST00000440899 HELZP42694 1942 aaKnown RBP12.32□□□□□ -0.44
UBE2D4-204ENST00000440899 A0A1B0GVL5 298 aa12.31□□□□□ -0.44
UBE2D4-204ENST00000440899 ANTXRLA6NF34 631 aa12.31□□□□□ -0.44
UBE2D4-204ENST00000440899 KIF20AO95235 890 aa12.31□□□□□ -0.44
UBE2D4-204ENST00000440899 KLF8O95600 359 aaPredicted RBP12.31□□□□□ -0.44
UBE2D4-204ENST00000440899 ASS1P00966 412 aaKnown RBP12.31□□□□□ -0.44
UBE2D4-204ENST00000440899 PFKFB1P16118 471 aa12.31□□□□□ -0.44
UBE2D4-204ENST00000440899 TRIM21P19474 475 aaKnown RBP12.31□□□□□ -0.44
UBE2D4-204ENST00000440899 KCNA4P22459 653 aa12.31□□□□□ -0.44
UBE2D4-204ENST00000440899 TIE1P35590 1138 aa12.31□□□□□ -0.44
UBE2D4-204ENST00000440899 NDST1P52848 882 aa12.31□□□□□ -0.44
UBE2D4-204ENST00000440899 GAD2Q05329 585 aa12.31□□□□□ -0.44
UBE2D4-204ENST00000440899 MESP2Q0VG99 397 aa12.31□□□□□ -0.44
UBE2D4-204ENST00000440899 PREPLQ4J6C6 727 aaPredicted RBP12.31□□□□□ -0.44
UBE2D4-204ENST00000440899 EOGTQ5NDL2 527 aa12.31□□□□□ -0.44
UBE2D4-204ENST00000440899 BTBD8Q5XKL5 378 aa12.31□□□□□ -0.44
UBE2D4-204ENST00000440899 CEP135Q66GS9 1140 aa12.31□□□□□ -0.44
UBE2D4-204ENST00000440899 PMS2CLQ68D20 193 aa12.31□□□□□ -0.44
UBE2D4-204ENST00000440899 RNF43Q68DV7 783 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms