RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 MED15Q96RN5 788 aa14.52□□□□□ -0.09
LTBR-202ENST00000440421 DUSP16Q9BY84 665 aa14.52□□□□□ -0.09
LTBR-202ENST00000440421 LINC00597Q9H2U6 94 aa14.52□□□□□ -0.09
LTBR-202ENST00000440421 FBXO44Q9H4M3 255 aa14.52□□□□□ -0.09
LTBR-202ENST00000440421 CCSER2Q9H7U1 834 aa14.52□□□□□ -0.09
LTBR-202ENST00000440421 RBM12Q9NTZ6 932 aaKnown RBP14.52□□□□□ -0.09
LTBR-202ENST00000440421 CPQQ9Y646 472 aa14.52□□□□□ -0.09
LTBR-202ENST00000440421 PATJQ8NI35 1801 aa14.52□□□□□ -0.09
LTBR-202ENST00000440421 MYO16Q9Y6X6 1858 aa14.51□□□□□ -0.09
LTBR-202ENST00000440421 FAM92AA1XBS5 289 aa14.51□□□□□ -0.09
LTBR-202ENST00000440421 PMM2O15305 246 aa14.51□□□□□ -0.09
LTBR-202ENST00000440421 CYP26A1O43174 497 aa14.51□□□□□ -0.09
LTBR-202ENST00000440421 LAMTOR5O43504 91 aa14.51□□□□□ -0.09
LTBR-202ENST00000440421 AFPP02771 609 aaKnown RBP14.51□□□□□ -0.09
LTBR-202ENST00000440421 CHRNB1P11230 501 aa14.51□□□□□ -0.09
LTBR-202ENST00000440421 CD19P15391 556 aa14.51□□□□□ -0.09
LTBR-202ENST00000440421 TBXAS1P24557 533 aaPredicted RBP14.51□□□□□ -0.09
LTBR-202ENST00000440421 MAGEA9P43362 315 aa14.51□□□□□ -0.09
LTBR-202ENST00000440421 MRE11P49959 708 aa14.51□□□□□ -0.09
LTBR-202ENST00000440421 MARSP56192 900 aaKnown RBP14.51□□□□□ -0.09
LTBR-202ENST00000440421 YWHAEP62258 255 aaKnown RBP14.51□□□□□ -0.09
LTBR-202ENST00000440421 MTAPQ13126 283 aa14.51□□□□□ -0.09
LTBR-202ENST00000440421 DPCR1Q3MIW9 517 aa14.51□□□□□ -0.09
LTBR-202ENST00000440421 HECTD3Q5T447 861 aa14.51□□□□□ -0.09
LTBR-202ENST00000440421 C1orf228Q6PIY5 440 aa14.51□□□□□ -0.09
LTBR-202ENST00000440421 PPM1KQ8N3J5 372 aa14.51□□□□□ -0.09
LTBR-202ENST00000440421 CPA6Q8N4T0 437 aa14.51□□□□□ -0.09
LTBR-202ENST00000440421 KAT5Q92993 513 aa14.51□□□□□ -0.09
LTBR-202ENST00000440421 CNOT6LQ96LI5 555 aaKnown RBP14.51□□□□□ -0.09
LTBR-202ENST00000440421 NACA2Q9H009 215 aa14.51□□□□□ -0.09
LTBR-202ENST00000440421 CFAP97Q9P2B7 532 aa14.51□□□□□ -0.09
LTBR-202ENST00000440421 P4HA2O15460 535 aa14.5□□□□□ -0.09
LTBR-202ENST00000440421 ZDHHC11BP0C7U3 371 aa14.5□□□□□ -0.09
LTBR-202ENST00000440421 SP9P0CG40 484 aa14.5□□□□□ -0.09
LTBR-202ENST00000440421 TCF3P15923 654 aa14.5□□□□□ -0.09
LTBR-202ENST00000440421 HOXD11P31277 338 aaPredicted RBP14.5□□□□□ -0.09
LTBR-202ENST00000440421 LRRC32Q14392 662 aa14.5□□□□□ -0.09
LTBR-202ENST00000440421 TPD52L1Q16890 204 aaPredicted RBP14.5□□□□□ -0.09
LTBR-202ENST00000440421 GOLGA7BQ2TAP0 167 aa14.5□□□□□ -0.09
LTBR-202ENST00000440421 EML3Q32P44 896 aa14.5□□□□□ -0.09
LTBR-202ENST00000440421 SNX30Q5VWJ9 437 aa14.5□□□□□ -0.09
LTBR-202ENST00000440421 ARHGAP17Q68EM7 881 aa14.5□□□□□ -0.09
LTBR-202ENST00000440421 TMEM270Q6UE05 265 aa14.5□□□□□ -0.09
LTBR-202ENST00000440421 RRAGAQ7L523 313 aa14.5□□□□□ -0.09
LTBR-202ENST00000440421 ARHGEF19Q8IW93 802 aa14.5□□□□□ -0.09
LTBR-202ENST00000440421 MAML2Q8IZL2 1156 aaPredicted RBP14.5□□□□□ -0.09
LTBR-202ENST00000440421 UBR7Q8N806 425 aa14.5□□□□□ -0.09
LTBR-202ENST00000440421 EHBP1Q8NDI1 1231 aa14.5□□□□□ -0.09
LTBR-202ENST00000440421 LMO3Q8TAP4 145 aa14.5□□□□□ -0.09
LTBR-202ENST00000440421 ATP2A3Q93084 1043 aa14.5□□□□□ -0.09
LTBR-202ENST00000440421 CHRDQ9H2X0 955 aa14.5□□□□□ -0.09
LTBR-202ENST00000440421 FAM124BQ9H5Z6 455 aaPredicted RBP14.5□□□□□ -0.09
LTBR-202ENST00000440421 ECT2Q9H8V3 914 aa14.5□□□□□ -0.09
LTBR-202ENST00000440421 TLR8Q9NR97 1041 aaKnown RBP14.5□□□□□ -0.09
LTBR-202ENST00000440421 SCML2Q9UQR0 700 aa14.5□□□□□ -0.09
LTBR-202ENST00000440421 PCDHB4Q9Y5E5 795 aa14.5□□□□□ -0.09
LTBR-202ENST00000440421 F5P12259 2224 aa14.49□□□□□ -0.09
LTBR-202ENST00000440421 IRF1P10914 325 aa14.49□□□□□ -0.09
LTBR-202ENST00000440421 NBL1P41271 181 aa14.49□□□□□ -0.09
LTBR-202ENST00000440421 TUBP50607 506 aa14.49□□□□□ -0.09
LTBR-202ENST00000440421 CSTF1Q05048 431 aaKnown RBP14.49□□□□□ -0.09
LTBR-202ENST00000440421 SGO2Q562F6 1265 aa14.49□□□□□ -0.09
LTBR-202ENST00000440421 NAIF1Q69YI7 327 aaPredicted RBP14.49□□□□□ -0.09
LTBR-202ENST00000440421 TSSK4Q6SA08 328 aa14.49□□□□□ -0.09
LTBR-202ENST00000440421 TTC30AQ86WT1 665 aa14.49□□□□□ -0.09
LTBR-202ENST00000440421 GPT2Q8TD30 523 aa14.49□□□□□ -0.09
LTBR-202ENST00000440421 CHFRQ96EP1 664 aa14.49□□□□□ -0.09
LTBR-202ENST00000440421 INTS2Q9H0H0 1204 aaKnown RBP14.49□□□□□ -0.09
LTBR-202ENST00000440421 NMUR1Q9HB89 426 aa14.49□□□□□ -0.09
LTBR-202ENST00000440421 PNPLA8Q9NP80 782 aa14.49□□□□□ -0.09
LTBR-202ENST00000440421 OSER1Q9NX31 292 aa14.49□□□□□ -0.09
LTBR-202ENST00000440421 TSPAN16Q9UKR8 245 aa14.49□□□□□ -0.09
LTBR-202ENST00000440421 R4GN57 208 aa14.49□□□□□ -0.09
LTBR-202ENST00000440421 A0A1W2PQH9 124 aa14.48□□□□□ -0.09
LTBR-202ENST00000440421 GOLGA6L22H0YM25 854 aa14.48□□□□□ -0.09
LTBR-202ENST00000440421 TLR5O60602 858 aa14.48□□□□□ -0.09
LTBR-202ENST00000440421 TBX18O95935 607 aa14.48□□□□□ -0.09
LTBR-202ENST00000440421 CALCAP01258 141 aa14.48□□□□□ -0.09
LTBR-202ENST00000440421 VDRP11473 427 aa14.48□□□□□ -0.09
LTBR-202ENST00000440421 GJA4P35212 333 aa14.48□□□□□ -0.09
LTBR-202ENST00000440421 MTIF2P46199 727 aaKnown RBP14.48□□□□□ -0.09
LTBR-202ENST00000440421 KIF11P52732 1056 aa14.48□□□□□ -0.09
LTBR-202ENST00000440421 SLC8A3P57103 927 aa14.48□□□□□ -0.09
LTBR-202ENST00000440421 AMPD2Q01433 879 aa14.48□□□□□ -0.09
LTBR-202ENST00000440421 DGKKQ5KSL6 1271 aa14.48□□□□□ -0.09
LTBR-202ENST00000440421 Q6ZS52 159 aa14.48□□□□□ -0.09
LTBR-202ENST00000440421 PIGZQ86VD9 579 aa14.48□□□□□ -0.09
LTBR-202ENST00000440421 DDX42Q86XP3 938 aaKnown RBP eCLIP14.48□□□□□ -0.09
LTBR-202ENST00000440421 IRF2BP1Q8IU81 584 aa14.48□□□□□ -0.09
LTBR-202ENST00000440421 ANKRD52Q8NB46 1076 aa14.48□□□□□ -0.09
LTBR-202ENST00000440421 UBA3Q8TBC4 463 aa14.48□□□□□ -0.09
LTBR-202ENST00000440421 ZFRQ96KR1 1074 aaKnown RBP14.48□□□□□ -0.09
LTBR-202ENST00000440421 NAGPAQ9UK23 515 aa14.48□□□□□ -0.09
LTBR-202ENST00000440421 NUDT5Q9UKK9 219 aa14.48□□□□□ -0.09
LTBR-202ENST00000440421 SH3BP1Q9Y3L3 701 aa14.48□□□□□ -0.09
LTBR-202ENST00000440421 CACNA1HO95180 2353 aa14.47□□□□□ -0.09
LTBR-202ENST00000440421 RNF225M0QZC1 329 aaPredicted RBP14.47□□□□□ -0.09
LTBR-202ENST00000440421 TULP2O00295 520 aa14.47□□□□□ -0.09
LTBR-202ENST00000440421 TRDMT1O14717 391 aaKnown RBP14.47□□□□□ -0.09
LTBR-202ENST00000440421 NFATC1O95644 943 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms