RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 FSTL4Q6MZW2 842 aa21.01■□□□□ 0.95
SHROOM1-204ENST00000440118 PRR23BQ6ZRT6 265 aa21.01■□□□□ 0.95
SHROOM1-204ENST00000440118 PAQR9Q6ZVX9 377 aa21.01■□□□□ 0.95
SHROOM1-204ENST00000440118 FILIP1Q7Z7B0 1213 aa21.01■□□□□ 0.95
SHROOM1-204ENST00000440118 TTC39CQ8N584 583 aa21.01■□□□□ 0.95
SHROOM1-204ENST00000440118 CD101Q93033 1021 aa21.01■□□□□ 0.95
SHROOM1-204ENST00000440118 CYFIP2Q96F07 1278 aa21.01■□□□□ 0.95
SHROOM1-204ENST00000440118 TWNKQ96RR1 684 aa21.01■□□□□ 0.95
SHROOM1-204ENST00000440118 SMOQ99835 787 aa21.01■□□□□ 0.95
SHROOM1-204ENST00000440118 RNF38Q9H0F5 515 aa21.01■□□□□ 0.95
SHROOM1-204ENST00000440118 COMMD8Q9NX08 183 aa21.01■□□□□ 0.95
SHROOM1-204ENST00000440118 RAB20Q9NX57 234 aa21.01■□□□□ 0.95
SHROOM1-204ENST00000440118 ARMCX3Q9UH62 379 aaPredicted RBP21.01■□□□□ 0.95
SHROOM1-204ENST00000440118 CHORDC1Q9UHD1 332 aaPredicted RBP21.01■□□□□ 0.95
SHROOM1-204ENST00000440118 SH3BP1Q9Y3L3 701 aa21.01■□□□□ 0.95
SHROOM1-204ENST00000440118 OLFM2O95897 454 aa21■□□□□ 0.95
SHROOM1-204ENST00000440118 EGFP01133 1207 aa21■□□□□ 0.95
SHROOM1-204ENST00000440118 PPP1R2P41236 205 aa21■□□□□ 0.95
SHROOM1-204ENST00000440118 ZNF394Q53GI3 561 aa21■□□□□ 0.95
SHROOM1-204ENST00000440118 ANKRD40Q6AI12 368 aa21■□□□□ 0.95
SHROOM1-204ENST00000440118 KLHL10Q6JEL2 608 aa21■□□□□ 0.95
SHROOM1-204ENST00000440118 CHFRQ96EP1 664 aa21■□□□□ 0.95
SHROOM1-204ENST00000440118 EPC1Q9H2F5 836 aa21■□□□□ 0.95
SHROOM1-204ENST00000440118 TLR8Q9NR97 1041 aaKnown RBP21■□□□□ 0.95
SHROOM1-204ENST00000440118 GMEB2Q9UKD1 530 aa21■□□□□ 0.95
SHROOM1-204ENST00000440118 SLC8A2Q9UPR5 921 aa21■□□□□ 0.95
SHROOM1-204ENST00000440118 CHURC1-FNTBB4DL54 471 aa20.99■□□□□ 0.95
SHROOM1-204ENST00000440118 LILRB5O75023 590 aa20.99■□□□□ 0.95
SHROOM1-204ENST00000440118 RNF40O75150 1001 aa20.99■□□□□ 0.95
SHROOM1-204ENST00000440118 CILPO75339 1184 aa20.99■□□□□ 0.95
SHROOM1-204ENST00000440118 FNTBP49356 437 aa20.99■□□□□ 0.95
SHROOM1-204ENST00000440118 GALK1P51570 392 aa20.99■□□□□ 0.95
SHROOM1-204ENST00000440118 CCDC40Q4G0X9 1142 aa20.99■□□□□ 0.95
SHROOM1-204ENST00000440118 FBXO43Q4G163 708 aa20.99■□□□□ 0.95
SHROOM1-204ENST00000440118 KIAA2013Q8IYS2 634 aa20.99■□□□□ 0.95
SHROOM1-204ENST00000440118 SUMF1Q8NBK3 374 aa20.99■□□□□ 0.95
SHROOM1-204ENST00000440118 NELL1Q92832 810 aa20.99■□□□□ 0.95
SHROOM1-204ENST00000440118 HEXIM2Q96MH2 286 aaKnown RBP20.99■□□□□ 0.95
SHROOM1-204ENST00000440118 HNRNPABQ99729 332 aaKnown RBP20.99■□□□□ 0.95
SHROOM1-204ENST00000440118 LINC00597Q9H2U6 94 aa20.99■□□□□ 0.95
SHROOM1-204ENST00000440118 MAN1B1Q9UKM7 699 aa20.99■□□□□ 0.95
SHROOM1-204ENST00000440118 CIZ1Q9ULV3 898 aaPredicted RBP20.99■□□□□ 0.95
SHROOM1-204ENST00000440118 MYOFQ9NZM1 2061 aa20.99■□□□□ 0.95
SHROOM1-204ENST00000440118 KIAA1549LQ6ZVL6 1849 aa20.99■□□□□ 0.95
SHROOM1-204ENST00000440118 GPR179Q6PRD1 2367 aa20.99■□□□□ 0.95
SHROOM1-204ENST00000440118 TNFRSF10BO14763 440 aa20.98■□□□□ 0.95
SHROOM1-204ENST00000440118 COCHO43405 550 aa20.98■□□□□ 0.95
SHROOM1-204ENST00000440118 BEST1O76090 585 aa20.98■□□□□ 0.95
SHROOM1-204ENST00000440118 ADH1CP00326 375 aa20.98■□□□□ 0.95
SHROOM1-204ENST00000440118 TDGF1P13385 188 aa20.98■□□□□ 0.95
SHROOM1-204ENST00000440118 TUBP50607 506 aa20.98■□□□□ 0.95
SHROOM1-204ENST00000440118 PMS1P54277 932 aaKnown RBP20.98■□□□□ 0.95
SHROOM1-204ENST00000440118 LPAL2Q16609 132 aa20.98■□□□□ 0.95
SHROOM1-204ENST00000440118 CLEC20AQ6ZU45 233 aa20.98■□□□□ 0.95
SHROOM1-204ENST00000440118 ZMIZ2Q8NF64 920 aa20.98■□□□□ 0.95
SHROOM1-204ENST00000440118 SPATA20Q8TB22 786 aa20.98■□□□□ 0.95
SHROOM1-204ENST00000440118 SEMA4DQ92854 862 aa20.98■□□□□ 0.95
SHROOM1-204ENST00000440118 DHTKD1Q96HY7 919 aaPredicted RBP20.98■□□□□ 0.95
SHROOM1-204ENST00000440118 CCSER2Q9H7U1 834 aa20.98■□□□□ 0.95
SHROOM1-204ENST00000440118 CSNK1G1Q9HCP0 422 aa20.98■□□□□ 0.95
SHROOM1-204ENST00000440118 TBC1D14Q9P2M4 693 aa20.98■□□□□ 0.95
SHROOM1-204ENST00000440118 TLR5O60602 858 aa20.97■□□□□ 0.95
SHROOM1-204ENST00000440118 PAPSS2O95340 614 aaPredicted RBP20.97■□□□□ 0.95
SHROOM1-204ENST00000440118 IRF1P10914 325 aa20.97■□□□□ 0.95
SHROOM1-204ENST00000440118 ACO1P21399 889 aaKnown RBP20.97■□□□□ 0.95
SHROOM1-204ENST00000440118 SLC8A3P57103 927 aa20.97■□□□□ 0.95
SHROOM1-204ENST00000440118 ZXDBP98169 803 aa20.97■□□□□ 0.95
SHROOM1-204ENST00000440118 GOLGA8FQ08AF8 430 aa20.97■□□□□ 0.95
SHROOM1-204ENST00000440118 GOLGA8DPQ0D2H9 430 aa20.97■□□□□ 0.95
SHROOM1-204ENST00000440118 NAIF1Q69YI7 327 aaPredicted RBP20.97■□□□□ 0.95
SHROOM1-204ENST00000440118 CEP68Q76N32 757 aa20.97■□□□□ 0.95
SHROOM1-204ENST00000440118 LONP2Q86WA8 852 aa20.97■□□□□ 0.95
SHROOM1-204ENST00000440118 DCLK2Q8N568 766 aa20.97■□□□□ 0.95
SHROOM1-204ENST00000440118 CCDC26Q8TAB7 109 aa20.97■□□□□ 0.95
SHROOM1-204ENST00000440118 METTL14Q9HCE5 456 aaKnown RBP20.97■□□□□ 0.95
SHROOM1-204ENST00000440118 CISHQ9NSE2 258 aa20.97■□□□□ 0.95
SHROOM1-204ENST00000440118 CTNND2Q9UQB3 1225 aa20.97■□□□□ 0.95
SHROOM1-204ENST00000440118 FRYLO94915 3013 aa20.96■□□□□ 0.95
SHROOM1-204ENST00000440118 RALGAPA1Q6GYQ0 2036 aa20.96■□□□□ 0.95
SHROOM1-204ENST00000440118 BICDL2A1A5D9 508 aa20.96■□□□□ 0.95
SHROOM1-204ENST00000440118 BIN1O00499 593 aa20.96■□□□□ 0.95
SHROOM1-204ENST00000440118 CYP26A1O43174 497 aa20.96■□□□□ 0.95
SHROOM1-204ENST00000440118 CYP17A1P05093 508 aa20.96■□□□□ 0.95
SHROOM1-204ENST00000440118 YWHAEP62258 255 aaKnown RBP20.96■□□□□ 0.95
SHROOM1-204ENST00000440118 DMWDQ09019 674 aa20.96■□□□□ 0.95
SHROOM1-204ENST00000440118 SIM2Q14190 667 aaPredicted RBP20.96■□□□□ 0.95
SHROOM1-204ENST00000440118 CBWD6Q4V339 395 aa20.96■□□□□ 0.95
SHROOM1-204ENST00000440118 CBWD3Q5JTY5 395 aa20.96■□□□□ 0.95
SHROOM1-204ENST00000440118 CBWD5Q5RIA9 395 aa20.96■□□□□ 0.95
SHROOM1-204ENST00000440118 PKN3Q6P5Z2 889 aa20.96■□□□□ 0.95
SHROOM1-204ENST00000440118 ELOA2Q8IYF1 753 aaPredicted RBP20.96■□□□□ 0.95
SHROOM1-204ENST00000440118 KIAA1958Q8N8K9 716 aa20.96■□□□□ 0.95
SHROOM1-204ENST00000440118 RPLP0P6Q8NHW5 317 aa20.96■□□□□ 0.95
SHROOM1-204ENST00000440118 ACDQ96AP0 544 aa20.96■□□□□ 0.95
SHROOM1-204ENST00000440118 FAXDC2Q96IV6 333 aa20.96■□□□□ 0.95
SHROOM1-204ENST00000440118 ARID3AQ99856 593 aa20.96■□□□□ 0.95
SHROOM1-204ENST00000440118 C2orf42Q9NWW7 574 aa20.96■□□□□ 0.95
SHROOM1-204ENST00000440118 IL37Q9NZH6 218 aa20.96■□□□□ 0.95
SHROOM1-204ENST00000440118 SPAG17Q6Q759 2223 aa20.96■□□□□ 0.95
SHROOM1-204ENST00000440118 E2F8A0AVK6 867 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms