RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 DEFB115Q30KQ5 88 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 P3H1Q32P28 736 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 RAB6CQ53S08 254 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 EFHC1Q5JVL4 640 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 CCDC25Q86WR0 208 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 MAP7D3Q8IWC1 876 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 ARFGAP2Q8N6H7 521 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 GLIS1Q8NBF1 620 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 SPATA18Q8TC71 538 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 FAM172AQ8WUF8 416 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 KCTD13Q8WZ19 329 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 CENPIQ92674 756 aaPredicted RBP12.32□□□□□ -0.44
SMAD3-202ENST00000439724 TLCD1Q96CP7 247 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 PGM2Q96G03 612 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 CALN1Q9BXU9 219 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 CAPS2Q9BXY5 557 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 OSBPL7Q9BZF2 842 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 RAB6CQ9H0N0 254 aa12.32□□□□□ -0.44
SMAD3-202ENST00000439724 NGRNQ9NPE2 291 aaKnown RBP12.32□□□□□ -0.44
SMAD3-202ENST00000439724 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.32□□□□□ -0.44
SMAD3-202ENST00000439724 FRMPD3Q5JV73 1810 aa12.31□□□□□ -0.44
SMAD3-202ENST00000439724 SRCAPQ6ZRS2 3230 aa12.31□□□□□ -0.44
SMAD3-202ENST00000439724 A0A0U1RQF3 1178 aa12.31□□□□□ -0.44
SMAD3-202ENST00000439724 SGK1O00141 431 aa12.31□□□□□ -0.44
SMAD3-202ENST00000439724 ATP2C2O75185 946 aa12.31□□□□□ -0.44
SMAD3-202ENST00000439724 TOMM70O94826 608 aa12.31□□□□□ -0.44
SMAD3-202ENST00000439724 MYCNP04198 464 aaPredicted RBP12.31□□□□□ -0.44
SMAD3-202ENST00000439724 SKIP12755 728 aa12.31□□□□□ -0.44
SMAD3-202ENST00000439724 LCP1P13796 627 aa12.31□□□□□ -0.44
SMAD3-202ENST00000439724 NPR3P17342 541 aa12.31□□□□□ -0.44
SMAD3-202ENST00000439724 PAX3P23760 479 aa12.31□□□□□ -0.44
SMAD3-202ENST00000439724 ACTN2P35609 894 aa12.31□□□□□ -0.44
SMAD3-202ENST00000439724 CLCNKBP51801 687 aa12.31□□□□□ -0.44
SMAD3-202ENST00000439724 AFF1P51825 1210 aaKnown RBP12.31□□□□□ -0.44
SMAD3-202ENST00000439724 HDAC4P56524 1084 aa12.31□□□□□ -0.44
SMAD3-202ENST00000439724 SLC8A3P57103 927 aa12.31□□□□□ -0.44
SMAD3-202ENST00000439724 ATP11AP98196 1134 aa12.31□□□□□ -0.44
SMAD3-202ENST00000439724 PLCB3Q01970 1234 aa12.31□□□□□ -0.44
SMAD3-202ENST00000439724 MORF4L2Q15014 288 aa12.31□□□□□ -0.44
SMAD3-202ENST00000439724 PAQR9Q6ZVX9 377 aa12.31□□□□□ -0.44
SMAD3-202ENST00000439724 PIGZQ86VD9 579 aa12.31□□□□□ -0.44
SMAD3-202ENST00000439724 ZCCHC9Q8N567 271 aaKnown RBP12.31□□□□□ -0.44
SMAD3-202ENST00000439724 CD99L2Q8TCZ2 262 aa12.31□□□□□ -0.44
SMAD3-202ENST00000439724 PXYLP1Q8TE99 480 aa12.31□□□□□ -0.44
SMAD3-202ENST00000439724 CLEC4CQ8WTT0 213 aa12.31□□□□□ -0.44
SMAD3-202ENST00000439724 PGBD4Q96DM1 585 aa12.31□□□□□ -0.44
SMAD3-202ENST00000439724 RNF157Q96PX1 679 aa12.31□□□□□ -0.44
SMAD3-202ENST00000439724 DDX23Q9BUQ8 820 aaKnown RBP12.31□□□□□ -0.44
SMAD3-202ENST00000439724 SNRNP25Q9BV90 132 aaKnown RBP12.31□□□□□ -0.44
SMAD3-202ENST00000439724 ADAM7Q9H2U9 754 aa12.31□□□□□ -0.44
SMAD3-202ENST00000439724 CENPHQ9H3R5 247 aa12.31□□□□□ -0.44
SMAD3-202ENST00000439724 UBN1Q9NPG3 1134 aa12.31□□□□□ -0.44
SMAD3-202ENST00000439724 DDX43Q9NXZ2 648 aaKnown RBP12.31□□□□□ -0.44
SMAD3-202ENST00000439724 TPX2Q9ULW0 747 aaKnown RBP12.31□□□□□ -0.44
SMAD3-202ENST00000439724 SHOC2Q9UQ13 582 aa12.31□□□□□ -0.44
SMAD3-202ENST00000439724 MOXD2PA6NHM9 499 aa12.3□□□□□ -0.44
SMAD3-202ENST00000439724 MCF2LO15068 1137 aa12.3□□□□□ -0.44
SMAD3-202ENST00000439724 INPPL1O15357 1258 aa12.3□□□□□ -0.44
SMAD3-202ENST00000439724 DAB1O75553 588 aa12.3□□□□□ -0.44
SMAD3-202ENST00000439724 TTC4O95801 387 aa12.3□□□□□ -0.44
SMAD3-202ENST00000439724 GNRH1P01148 92 aa12.3□□□□□ -0.44
SMAD3-202ENST00000439724 PECAM1P16284 738 aaPredicted RBP12.3□□□□□ -0.44
SMAD3-202ENST00000439724 IGFBP6P24592 240 aaPredicted RBP12.3□□□□□ -0.44
SMAD3-202ENST00000439724 ACAT1P24752 427 aaKnown RBP12.3□□□□□ -0.44
SMAD3-202ENST00000439724 ADCY1Q08828 1119 aa12.3□□□□□ -0.44
SMAD3-202ENST00000439724 GRIK3Q13003 919 aa12.3□□□□□ -0.44
SMAD3-202ENST00000439724 GPS1Q13098 491 aa12.3□□□□□ -0.44
SMAD3-202ENST00000439724 MMRN1Q13201 1228 aa12.3□□□□□ -0.44
SMAD3-202ENST00000439724 KRT81Q14533 505 aa12.3□□□□□ -0.44
SMAD3-202ENST00000439724 NOMO1Q15155 1222 aa12.3□□□□□ -0.44
SMAD3-202ENST00000439724 UPP1Q16831 310 aa12.3□□□□□ -0.44
SMAD3-202ENST00000439724 DNAJC21Q5F1R6 531 aaKnown RBP12.3□□□□□ -0.44
SMAD3-202ENST00000439724 UBAP2Q5T6F2 1119 aaKnown RBP12.3□□□□□ -0.44
SMAD3-202ENST00000439724 LEKR1Q6ZMV7 388 aa12.3□□□□□ -0.44
SMAD3-202ENST00000439724 STRADAQ7RTN6 431 aa12.3□□□□□ -0.44
SMAD3-202ENST00000439724 PRUNE1Q86TP1 453 aa12.3□□□□□ -0.44
SMAD3-202ENST00000439724 C3orf58Q8NDZ4 430 aa12.3□□□□□ -0.44
SMAD3-202ENST00000439724 FAF2Q96CS3 445 aa12.3□□□□□ -0.44
SMAD3-202ENST00000439724 SYT15Q9BQS2 421 aa12.3□□□□□ -0.44
SMAD3-202ENST00000439724 ZNF670Q9BS34 389 aa12.3□□□□□ -0.44
SMAD3-202ENST00000439724 TSEN34Q9BSV6 310 aaKnown RBP12.3□□□□□ -0.44
SMAD3-202ENST00000439724 TMEM121Q9BTD3 319 aa12.3□□□□□ -0.44
SMAD3-202ENST00000439724 MAK16Q9BXY0 300 aaKnown RBP12.3□□□□□ -0.44
SMAD3-202ENST00000439724 ROPN1BQ9BZX4 212 aaPredicted RBP12.3□□□□□ -0.44
SMAD3-202ENST00000439724 ROPN1Q9HAT0 212 aaPredicted RBP12.3□□□□□ -0.44
SMAD3-202ENST00000439724 LRRC4CQ9HCJ2 640 aa12.3□□□□□ -0.44
SMAD3-202ENST00000439724 PCDH18Q9HCL0 1135 aa12.3□□□□□ -0.44
SMAD3-202ENST00000439724 CRTAC1Q9NQ79 661 aa12.3□□□□□ -0.44
SMAD3-202ENST00000439724 TRMT13Q9NUP7 481 aaKnown RBP12.3□□□□□ -0.44
SMAD3-202ENST00000439724 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.3□□□□□ -0.44
SMAD3-202ENST00000439724 CACNG4Q9UBN1 327 aa12.3□□□□□ -0.44
SMAD3-202ENST00000439724 NOD1Q9Y239 953 aa12.3□□□□□ -0.44
SMAD3-202ENST00000439724 ZSCAN5DPP0CG00 497 aa12.29□□□□□ -0.44
SMAD3-202ENST00000439724 ETS1P14921 441 aa12.29□□□□□ -0.44
SMAD3-202ENST00000439724 TGM2P21980 687 aa12.29□□□□□ -0.44
SMAD3-202ENST00000439724 MATKP42679 507 aa12.29□□□□□ -0.44
SMAD3-202ENST00000439724 IRAK1P51617 712 aa12.29□□□□□ -0.44
SMAD3-202ENST00000439724 EIF3EP60228 445 aaKnown RBP12.29□□□□□ -0.44
SMAD3-202ENST00000439724 GNGT1P63211 74 aa12.29□□□□□ -0.44
SMAD3-202ENST00000439724 ADIGQ0VDE8 80 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms