RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 DUSP12Q9UNI6 340 aa20.54■□□□□ 0.88
SEMA3B-206ENST00000439487 TRAV19A0A0A6YYK7 116 aa20.53■□□□□ 0.88
SEMA3B-206ENST00000439487 SOBPA7XYQ1 873 aa20.53■□□□□ 0.88
SEMA3B-206ENST00000439487 SERPINC1P01008 464 aa20.53■□□□□ 0.88
SEMA3B-206ENST00000439487 CFHP08603 1231 aa20.53■□□□□ 0.88
SEMA3B-206ENST00000439487 PGFP49763 221 aa20.53■□□□□ 0.88
SEMA3B-206ENST00000439487 GRM2Q14416 872 aa20.53■□□□□ 0.88
SEMA3B-206ENST00000439487 VITQ6UXI7 678 aa20.53■□□□□ 0.88
SEMA3B-206ENST00000439487 UBALD2Q8IYN6 164 aa20.53■□□□□ 0.88
SEMA3B-206ENST00000439487 FAM71AQ8IYT1 594 aa20.53■□□□□ 0.88
SEMA3B-206ENST00000439487 NEK11Q8NG66 645 aa20.53■□□□□ 0.88
SEMA3B-206ENST00000439487 STK33Q9BYT3 514 aa20.53■□□□□ 0.88
SEMA3B-206ENST00000439487 NLRC4Q9NPP4 1024 aa20.53■□□□□ 0.88
SEMA3B-206ENST00000439487 SCML2Q9UQR0 700 aa20.53■□□□□ 0.88
SEMA3B-206ENST00000439487 MYOFQ9NZM1 2061 aa20.52■□□□□ 0.88
SEMA3B-206ENST00000439487 A0A1B0GTH6 734 aa20.52■□□□□ 0.88
SEMA3B-206ENST00000439487 DPYSL4O14531 572 aa20.52■□□□□ 0.88
SEMA3B-206ENST00000439487 MED7O43513 233 aa20.52■□□□□ 0.88
SEMA3B-206ENST00000439487 ZDHHC11BP0C7U3 371 aa20.52■□□□□ 0.88
SEMA3B-206ENST00000439487 SETSIPP0DME0 302 aa20.52■□□□□ 0.88
SEMA3B-206ENST00000439487 HDCP19113 662 aa20.52■□□□□ 0.88
SEMA3B-206ENST00000439487 PLA2G4AP47712 749 aa20.52■□□□□ 0.88
SEMA3B-206ENST00000439487 RGS7P49802 495 aa20.52■□□□□ 0.88
SEMA3B-206ENST00000439487 GPC5P78333 572 aa20.52■□□□□ 0.88
SEMA3B-206ENST00000439487 FANCCQ00597 558 aa20.52■□□□□ 0.88
SEMA3B-206ENST00000439487 PTK2Q05397 1052 aa20.52■□□□□ 0.88
SEMA3B-206ENST00000439487 RAB41Q5JT25 222 aa20.52■□□□□ 0.88
SEMA3B-206ENST00000439487 DENND1BQ6P3S1 775 aa20.52■□□□□ 0.88
SEMA3B-206ENST00000439487 SLC35F5Q8WV83 523 aa20.52■□□□□ 0.88
SEMA3B-206ENST00000439487 USP13Q92995 863 aaPredicted RBP20.52■□□□□ 0.88
SEMA3B-206ENST00000439487 E2F7Q96AV8 911 aa20.52■□□□□ 0.88
SEMA3B-206ENST00000439487 LRRC3BQ96PB8 259 aa20.52■□□□□ 0.88
SEMA3B-206ENST00000439487 CCL26Q9Y258 94 aa20.52■□□□□ 0.88
SEMA3B-206ENST00000439487 USP3Q9Y6I4 520 aa20.52■□□□□ 0.88
SEMA3B-206ENST00000439487 CKMP06732 381 aa20.51■□□□□ 0.87
SEMA3B-206ENST00000439487 USP17L7P0C7H9 530 aa20.51■□□□□ 0.87
SEMA3B-206ENST00000439487 SRFP11831 508 aa20.51■□□□□ 0.87
SEMA3B-206ENST00000439487 TKTL1P51854 596 aa20.51■□□□□ 0.87
SEMA3B-206ENST00000439487 SNX30Q5VWJ9 437 aa20.51■□□□□ 0.87
SEMA3B-206ENST00000439487 SMYD5Q6GMV2 418 aa20.51■□□□□ 0.87
SEMA3B-206ENST00000439487 PMF1Q6P1K2 205 aa20.51■□□□□ 0.87
SEMA3B-206ENST00000439487 SLC47A2Q86VL8 602 aa20.51■□□□□ 0.87
SEMA3B-206ENST00000439487 MFSD6LQ8IWD5 586 aa20.51■□□□□ 0.87
SEMA3B-206ENST00000439487 RNF38Q9H0F5 515 aa20.51■□□□□ 0.87
SEMA3B-206ENST00000439487 NMUR1Q9HB89 426 aa20.51■□□□□ 0.87
SEMA3B-206ENST00000439487 LRRC4Q9HBW1 653 aa20.51■□□□□ 0.87
SEMA3B-206ENST00000439487 TLR8Q9NR97 1041 aaKnown RBP20.51■□□□□ 0.87
SEMA3B-206ENST00000439487 TDP1Q9NUW8 608 aa20.51■□□□□ 0.87
SEMA3B-206ENST00000439487 A0A1W2PQH9 124 aa20.5■□□□□ 0.87
SEMA3B-206ENST00000439487 F8VZ95 297 aa20.5■□□□□ 0.87
SEMA3B-206ENST00000439487 PIK3R2O00459 728 aa20.5■□□□□ 0.87
SEMA3B-206ENST00000439487 OAS1P00973 400 aaKnown RBP20.5■□□□□ 0.87
SEMA3B-206ENST00000439487 PSMC3P17980 439 aa20.5■□□□□ 0.87
SEMA3B-206ENST00000439487 GPD2P43304 727 aa20.5■□□□□ 0.87
SEMA3B-206ENST00000439487 ZNF445P59923 1031 aa20.5■□□□□ 0.87
SEMA3B-206ENST00000439487 SIGLEC14Q08ET2 396 aa20.5■□□□□ 0.87
SEMA3B-206ENST00000439487 NR1I3Q14994 352 aa20.5■□□□□ 0.87
SEMA3B-206ENST00000439487 HECTD3Q5T447 861 aa20.5■□□□□ 0.87
SEMA3B-206ENST00000439487 TRIM67Q6ZTA4 783 aa20.5■□□□□ 0.87
SEMA3B-206ENST00000439487 CCDC186Q7Z3E2 898 aa20.5■□□□□ 0.87
SEMA3B-206ENST00000439487 CELF5Q8N6W0 485 aaKnown RBP20.5■□□□□ 0.87
SEMA3B-206ENST00000439487 DEPDC1BQ8WUY9 529 aa20.5■□□□□ 0.87
SEMA3B-206ENST00000439487 KCTD13Q8WZ19 329 aa20.5■□□□□ 0.87
SEMA3B-206ENST00000439487 NDRG1Q92597 394 aaKnown RBP20.5■□□□□ 0.87
SEMA3B-206ENST00000439487 TRMT61BQ9BVS5 477 aaKnown RBP20.5■□□□□ 0.87
SEMA3B-206ENST00000439487 ULBP1Q9BZM6 244 aa20.5■□□□□ 0.87
SEMA3B-206ENST00000439487 CCSER2Q9H7U1 834 aa20.5■□□□□ 0.87
SEMA3B-206ENST00000439487 OSER1Q9NX31 292 aa20.5■□□□□ 0.87
SEMA3B-206ENST00000439487 OBP2AQ9NY56 170 aa20.5■□□□□ 0.87
SEMA3B-206ENST00000439487 F5P12259 2224 aa20.5■□□□□ 0.87
SEMA3B-206ENST00000439487 GABBR2O75899 941 aa20.49■□□□□ 0.87
SEMA3B-206ENST00000439487 LCP1P13796 627 aa20.49■□□□□ 0.87
SEMA3B-206ENST00000439487 PFKLP17858 780 aa20.49■□□□□ 0.87
SEMA3B-206ENST00000439487 GDI1P31150 447 aa20.49■□□□□ 0.87
SEMA3B-206ENST00000439487 PDE6CP51160 858 aa20.49■□□□□ 0.87
SEMA3B-206ENST00000439487 JAM2P57087 298 aa20.49■□□□□ 0.87
SEMA3B-206ENST00000439487 BPIFB4P59827 614 aa20.49■□□□□ 0.87
SEMA3B-206ENST00000439487 ADIGQ0VDE8 80 aa20.49■□□□□ 0.87
SEMA3B-206ENST00000439487 ZNF268Q14587 947 aaPredicted RBP20.49■□□□□ 0.87
SEMA3B-206ENST00000439487 SCD5Q86SK9 330 aa20.49■□□□□ 0.87
SEMA3B-206ENST00000439487 YAF2Q8IY57 180 aa20.49■□□□□ 0.87
SEMA3B-206ENST00000439487 RNF214Q8ND24 703 aa20.49■□□□□ 0.87
SEMA3B-206ENST00000439487 TTC16Q8NEE8 873 aa20.49■□□□□ 0.87
SEMA3B-206ENST00000439487 BPIFB1Q8TDL5 484 aa20.49■□□□□ 0.87
SEMA3B-206ENST00000439487 SPAG5Q96R06 1193 aa20.49■□□□□ 0.87
SEMA3B-206ENST00000439487 SLC2A4RGQ9NR83 387 aa20.49■□□□□ 0.87
SEMA3B-206ENST00000439487 DAAM1Q9Y4D1 1078 aa20.49■□□□□ 0.87
SEMA3B-206ENST00000439487 FAM86C2PA6NEL3 165 aa20.48■□□□□ 0.87
SEMA3B-206ENST00000439487 COCHO43405 550 aa20.48■□□□□ 0.87
SEMA3B-206ENST00000439487 GFPT2O94808 682 aa20.48■□□□□ 0.87
SEMA3B-206ENST00000439487 OLFM2O95897 454 aa20.48■□□□□ 0.87
SEMA3B-206ENST00000439487 ZBED1O96006 694 aa20.48■□□□□ 0.87
SEMA3B-206ENST00000439487 MBL2P11226 248 aaPredicted RBP20.48■□□□□ 0.87
SEMA3B-206ENST00000439487 UBASH3AP57075 661 aa20.48■□□□□ 0.87
SEMA3B-206ENST00000439487 PASD1Q8IV76 773 aa20.48■□□□□ 0.87
SEMA3B-206ENST00000439487 SIX6OS1Q8N1H7 587 aa20.48■□□□□ 0.87
SEMA3B-206ENST00000439487 RIN3Q8TB24 985 aa20.48■□□□□ 0.87
SEMA3B-206ENST00000439487 HSFY1Q96LI6 401 aa20.48■□□□□ 0.87
SEMA3B-206ENST00000439487 BRD9Q9H8M2 597 aa20.48■□□□□ 0.87
SEMA3B-206ENST00000439487 KIF9Q9HAQ2 790 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms