RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 ZNF653Q96CK0 615 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 PRDM12Q9H4Q4 367 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 MAN1C1Q9NR34 630 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 TMEM51Q9NW97 253 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 UVRAGQ9P2Y5 699 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 PPP2R2CQ9Y2T4 447 aa13.34□□□□□ -0.27
SCLT1-202ENST00000439369 TCRBV5S1A1TA0A578 114 aa13.33□□□□□ -0.28
SCLT1-202ENST00000439369 GOLGA6L9A6NEM1 432 aa13.33□□□□□ -0.28
SCLT1-202ENST00000439369 SIGLEC16A6NMB1 481 aa13.33□□□□□ -0.28
SCLT1-202ENST00000439369 SLC38A8A6NNN8 435 aa13.33□□□□□ -0.28
SCLT1-202ENST00000439369 PAPSS1O43252 624 aaPredicted RBP13.33□□□□□ -0.28
SCLT1-202ENST00000439369 XYLBO75191 536 aa13.33□□□□□ -0.28
SCLT1-202ENST00000439369 MTA2O94776 668 aa13.33□□□□□ -0.28
SCLT1-202ENST00000439369 FGF19O95750 216 aa13.33□□□□□ -0.28
SCLT1-202ENST00000439369 EPCAMP16422 314 aa13.33□□□□□ -0.28
SCLT1-202ENST00000439369 RRM1P23921 792 aa13.33□□□□□ -0.28
SCLT1-202ENST00000439369 YWHAQP27348 245 aa13.33□□□□□ -0.28
SCLT1-202ENST00000439369 DEKP35659 375 aaKnown RBP13.33□□□□□ -0.28
SCLT1-202ENST00000439369 HADHBP55084 474 aaKnown RBP13.33□□□□□ -0.28
SCLT1-202ENST00000439369 DAOAP59103 153 aa13.33□□□□□ -0.28
SCLT1-202ENST00000439369 MRPS5P82675 430 aaKnown RBP13.33□□□□□ -0.28
SCLT1-202ENST00000439369 SLC6A3Q01959 620 aa13.33□□□□□ -0.28
SCLT1-202ENST00000439369 KIF5AQ12840 1032 aa13.33□□□□□ -0.28
SCLT1-202ENST00000439369 DNAJC24Q6P3W2 148 aa13.33□□□□□ -0.28
SCLT1-202ENST00000439369 OLFML1Q6UWY5 402 aa13.33□□□□□ -0.28
SCLT1-202ENST00000439369 GPRIN1Q7Z2K8 1008 aa13.33□□□□□ -0.28
SCLT1-202ENST00000439369 MON1AQ86VX9 555 aa13.33□□□□□ -0.28
SCLT1-202ENST00000439369 SLITRK1Q96PX8 696 aa13.33□□□□□ -0.28
SCLT1-202ENST00000439369 GAS2L1Q99501 681 aaPredicted RBP13.33□□□□□ -0.28
SCLT1-202ENST00000439369 DESI2Q9BSY9 194 aa13.33□□□□□ -0.28
SCLT1-202ENST00000439369 THAP2Q9H0W7 228 aa13.33□□□□□ -0.28
SCLT1-202ENST00000439369 CNOT8Q9UFF9 292 aaKnown RBP13.33□□□□□ -0.28
SCLT1-202ENST00000439369 MTCH2Q9Y6C9 303 aa13.33□□□□□ -0.28
SCLT1-202ENST00000439369 PLXNA3P51805 1871 aa13.33□□□□□ -0.28
SCLT1-202ENST00000439369 ATG2AQ2TAZ0 1938 aa13.33□□□□□ -0.28
SCLT1-202ENST00000439369 PER2O15055 1255 aa13.32□□□□□ -0.28
SCLT1-202ENST00000439369 KRT86O43790 486 aa13.32□□□□□ -0.28
SCLT1-202ENST00000439369 HSF2BPO75031 334 aa13.32□□□□□ -0.28
SCLT1-202ENST00000439369 SOAT2O75908 522 aa13.32□□□□□ -0.28
SCLT1-202ENST00000439369 CSPG5O95196 566 aa13.32□□□□□ -0.28
SCLT1-202ENST00000439369 SPATA31D3P0C874 917 aa13.32□□□□□ -0.28
SCLT1-202ENST00000439369 LCP1P13796 627 aa13.32□□□□□ -0.28
SCLT1-202ENST00000439369 HMGA1P17096 107 aaKnown RBP13.32□□□□□ -0.28
SCLT1-202ENST00000439369 HOXB8P17481 243 aaPredicted RBP13.32□□□□□ -0.28
SCLT1-202ENST00000439369 ABCB4P21439 1286 aa13.32□□□□□ -0.28
SCLT1-202ENST00000439369 GPR15P49685 360 aa13.32□□□□□ -0.28
SCLT1-202ENST00000439369 HYAL1Q12794 435 aa13.32□□□□□ -0.28
SCLT1-202ENST00000439369 COL19A1Q14993 1142 aa13.32□□□□□ -0.28
SCLT1-202ENST00000439369 TAF12Q16514 161 aa13.32□□□□□ -0.28
SCLT1-202ENST00000439369 IFI16Q16666 785 aaKnown RBP13.32□□□□□ -0.28
SCLT1-202ENST00000439369 PABPC1LQ4VXU2 614 aaKnown RBP13.32□□□□□ -0.28
SCLT1-202ENST00000439369 TCEAL5Q5H9L2 206 aa13.32□□□□□ -0.28
SCLT1-202ENST00000439369 PPP1R15BQ5SWA1 713 aa13.32□□□□□ -0.28
SCLT1-202ENST00000439369 CYP4A22Q5TCH4 519 aa13.32□□□□□ -0.28
SCLT1-202ENST00000439369 OR6B2Q6IFH4 312 aa13.32□□□□□ -0.28
SCLT1-202ENST00000439369 SPATA31D4Q6ZUB0 917 aa13.32□□□□□ -0.28
SCLT1-202ENST00000439369 FAM183BPQ6ZVS7 135 aa13.32□□□□□ -0.28
SCLT1-202ENST00000439369 RBM23Q86U06 439 aaKnown RBP13.32□□□□□ -0.28
SCLT1-202ENST00000439369 SCUBE3Q8IX30 993 aa13.32□□□□□ -0.28
SCLT1-202ENST00000439369 ZNF276Q8N554 614 aa13.32□□□□□ -0.28
SCLT1-202ENST00000439369 UBE2Q2Q8WVN8 375 aa13.32□□□□□ -0.28
SCLT1-202ENST00000439369 GOLGA1Q92805 767 aa13.32□□□□□ -0.28
SCLT1-202ENST00000439369 ZNF512Q96ME7 567 aaPredicted RBP13.32□□□□□ -0.28
SCLT1-202ENST00000439369 PACSIN1Q9BY11 444 aa13.32□□□□□ -0.28
SCLT1-202ENST00000439369 ULBP1Q9BZM6 244 aa13.32□□□□□ -0.28
SCLT1-202ENST00000439369 SFXN1Q9H9B4 322 aa13.32□□□□□ -0.28
SCLT1-202ENST00000439369 CLIC5Q9NZA1 410 aa13.32□□□□□ -0.28
SCLT1-202ENST00000439369 ZKSCAN5Q9Y2L8 839 aa13.32□□□□□ -0.28
SCLT1-202ENST00000439369 MTCL1Q9Y4B5 1905 aaKnown RBP13.31□□□□□ -0.28
SCLT1-202ENST00000439369 KRT3P12035 628 aa13.31□□□□□ -0.28
SCLT1-202ENST00000439369 CDR1P51861 262 aa13.31□□□□□ -0.28
SCLT1-202ENST00000439369 EPHA5P54756 1037 aa13.31□□□□□ -0.28
SCLT1-202ENST00000439369 YWHAZP63104 245 aaKnown RBP13.31□□□□□ -0.28
SCLT1-202ENST00000439369 MAMLD1Q13495 774 aa13.31□□□□□ -0.28
SCLT1-202ENST00000439369 HABP4Q5JVS0 413 aaKnown RBP13.31□□□□□ -0.28
SCLT1-202ENST00000439369 FAM102AQ5T9C2 384 aaPredicted RBP13.31□□□□□ -0.28
SCLT1-202ENST00000439369 SNX30Q5VWJ9 437 aa13.31□□□□□ -0.28
SCLT1-202ENST00000439369 DNAJB7Q7Z6W7 309 aaPredicted RBP13.31□□□□□ -0.28
SCLT1-202ENST00000439369 RNF10Q8N5U6 811 aaKnown RBP13.31□□□□□ -0.28
SCLT1-202ENST00000439369 SCAMP5Q8TAC9 235 aa13.31□□□□□ -0.28
SCLT1-202ENST00000439369 KIAA1524Q8TCG1 905 aa13.31□□□□□ -0.28
SCLT1-202ENST00000439369 FNIP1Q8TF40 1166 aa13.31□□□□□ -0.28
SCLT1-202ENST00000439369 GIPC2Q8TF65 315 aa13.31□□□□□ -0.28
SCLT1-202ENST00000439369 FBXO32Q969P5 355 aa13.31□□□□□ -0.28
SCLT1-202ENST00000439369 LRCH3Q96II8 777 aa13.31□□□□□ -0.28
SCLT1-202ENST00000439369 CDK5RAP1Q96SZ6 601 aaKnown RBP13.31□□□□□ -0.28
SCLT1-202ENST00000439369 SELENOOQ9BVL4 669 aa13.31□□□□□ -0.28
SCLT1-202ENST00000439369 PRKD2Q9BZL6 878 aa13.31□□□□□ -0.28
SCLT1-202ENST00000439369 TLR8Q9NR97 1041 aaKnown RBP13.31□□□□□ -0.28
SCLT1-202ENST00000439369 RRN3Q9NYV6 651 aa13.31□□□□□ -0.28
SCLT1-202ENST00000439369 TJP2Q9UDY2 1190 aa13.31□□□□□ -0.28
SCLT1-202ENST00000439369 TMEM59LQ9UK28 342 aa13.31□□□□□ -0.28
SCLT1-202ENST00000439369 PYCARDQ9ULZ3 195 aa13.31□□□□□ -0.28
SCLT1-202ENST00000439369 CHD9Q3L8U1 2897 aa13.3□□□□□ -0.28
SCLT1-202ENST00000439369 SOBPA7XYQ1 873 aa13.3□□□□□ -0.28
SCLT1-202ENST00000439369 DAB1O75553 588 aa13.3□□□□□ -0.28
SCLT1-202ENST00000439369 LTFP02788 710 aa13.3□□□□□ -0.28
SCLT1-202ENST00000439369 USP17L7P0C7H9 530 aa13.3□□□□□ -0.28
SCLT1-202ENST00000439369 ZDHHC11BP0C7U3 371 aa13.3□□□□□ -0.28
SCLT1-202ENST00000439369 DESP17661 470 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms