RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 CCR3P51677 355 aa14.65□□□□□ -0.06
PRAME-209ENST00000439106 STX17P56962 302 aa14.65□□□□□ -0.06
PRAME-209ENST00000439106 MCCD1P59942 119 aaPredicted RBP14.65□□□□□ -0.06
PRAME-209ENST00000439106 SLC7A9P82251 487 aa14.65□□□□□ -0.06
PRAME-209ENST00000439106 FKBP3Q00688 224 aaKnown RBP14.65□□□□□ -0.06
PRAME-209ENST00000439106 LRRC63Q05C16 580 aa14.65□□□□□ -0.06
PRAME-209ENST00000439106 ENPEPQ07075 957 aa14.65□□□□□ -0.06
PRAME-209ENST00000439106 LRMPQ12912 555 aa14.65□□□□□ -0.06
PRAME-209ENST00000439106 DGKKQ5KSL6 1271 aa14.65□□□□□ -0.06
PRAME-209ENST00000439106 PPP1R26Q5T8A7 1209 aaPredicted RBP14.65□□□□□ -0.06
PRAME-209ENST00000439106 C1orf228Q6PIY5 440 aa14.65□□□□□ -0.06
PRAME-209ENST00000439106 FILIP1Q7Z7B0 1213 aa14.65□□□□□ -0.06
PRAME-209ENST00000439106 CPA6Q8N4T0 437 aa14.65□□□□□ -0.06
PRAME-209ENST00000439106 DCLK2Q8N568 766 aa14.65□□□□□ -0.06
PRAME-209ENST00000439106 SUMF1Q8NBK3 374 aa14.65□□□□□ -0.06
PRAME-209ENST00000439106 ZBTB44Q8NCP5 570 aa14.65□□□□□ -0.06
PRAME-209ENST00000439106 CCDC150Q8NCX0 1101 aa14.65□□□□□ -0.06
PRAME-209ENST00000439106 EZH1Q92800 747 aaPredicted RBP14.65□□□□□ -0.06
PRAME-209ENST00000439106 NELL1Q92832 810 aa14.65□□□□□ -0.06
PRAME-209ENST00000439106 WBP2Q969T9 261 aa14.65□□□□□ -0.06
PRAME-209ENST00000439106 SLC35C1Q96A29 364 aa14.65□□□□□ -0.06
PRAME-209ENST00000439106 CYFIP2Q96F07 1278 aa14.65□□□□□ -0.06
PRAME-209ENST00000439106 DUSP9Q99956 384 aaKnown RBP14.65□□□□□ -0.06
PRAME-209ENST00000439106 CYP3A43Q9HB55 503 aa14.65□□□□□ -0.06
PRAME-209ENST00000439106 ZSCAN32Q9NX65 697 aa14.65□□□□□ -0.06
PRAME-209ENST00000439106 CFAP97Q9P2B7 532 aa14.65□□□□□ -0.06
PRAME-209ENST00000439106 HOOK1Q9UJC3 728 aaKnown RBP14.65□□□□□ -0.06
PRAME-209ENST00000439106 HHLA1C9JL84 531 aa14.64□□□□□ -0.07
PRAME-209ENST00000439106 PSMA7O14818 248 aa14.64□□□□□ -0.07
PRAME-209ENST00000439106 CYP26A1O43174 497 aa14.64□□□□□ -0.07
PRAME-209ENST00000439106 FAM200BP0CF97 657 aa14.64□□□□□ -0.07
PRAME-209ENST00000439106 IRF1P10914 325 aa14.64□□□□□ -0.07
PRAME-209ENST00000439106 TCF3P15923 654 aa14.64□□□□□ -0.07
PRAME-209ENST00000439106 PDE6CP51160 858 aa14.64□□□□□ -0.07
PRAME-209ENST00000439106 SRSF5Q13243 272 aaKnown RBP14.64□□□□□ -0.07
PRAME-209ENST00000439106 TMEM196Q5HYL7 178 aa14.64□□□□□ -0.07
PRAME-209ENST00000439106 HEATR6Q6AI08 1181 aaKnown RBP14.64□□□□□ -0.07
PRAME-209ENST00000439106 SPEM1Q8N4L4 309 aa14.64□□□□□ -0.07
PRAME-209ENST00000439106 SLC4A11Q8NBS3 891 aa14.64□□□□□ -0.07
PRAME-209ENST00000439106 ATRIPQ8WXE1 791 aa14.64□□□□□ -0.07
PRAME-209ENST00000439106 ATP2A3Q93084 1043 aa14.64□□□□□ -0.07
PRAME-209ENST00000439106 ZFRQ96KR1 1074 aaKnown RBP14.64□□□□□ -0.07
PRAME-209ENST00000439106 HNRNPABQ99729 332 aaKnown RBP14.64□□□□□ -0.07
PRAME-209ENST00000439106 HINFPQ9BQA5 517 aa14.64□□□□□ -0.07
PRAME-209ENST00000439106 CSNK1G1Q9HCP0 422 aa14.64□□□□□ -0.07
PRAME-209ENST00000439106 CISHQ9NSE2 258 aa14.64□□□□□ -0.07
PRAME-209ENST00000439106 IL37Q9NZH6 218 aa14.64□□□□□ -0.07
PRAME-209ENST00000439106 CIZ1Q9ULV3 898 aaPredicted RBP14.64□□□□□ -0.07
PRAME-209ENST00000439106 FAM92AA1XBS5 289 aa14.63□□□□□ -0.07
PRAME-209ENST00000439106 CHURC1-FNTBB4DL54 471 aa14.63□□□□□ -0.07
PRAME-209ENST00000439106 PPP1R3GB7ZBB8 358 aa14.63□□□□□ -0.07
PRAME-209ENST00000439106 K7ESF4 209 aa14.63□□□□□ -0.07
PRAME-209ENST00000439106 TRDMT1O14717 391 aaKnown RBP14.63□□□□□ -0.07
PRAME-209ENST00000439106 LILRB5O75023 590 aa14.63□□□□□ -0.07
PRAME-209ENST00000439106 RNF40O75150 1001 aa14.63□□□□□ -0.07
PRAME-209ENST00000439106 CYP17A1P05093 508 aa14.63□□□□□ -0.07
PRAME-209ENST00000439106 PPP3CCP48454 512 aa14.63□□□□□ -0.07
PRAME-209ENST00000439106 FNTBP49356 437 aa14.63□□□□□ -0.07
PRAME-209ENST00000439106 GRSF1Q12849 480 aaKnown RBP eCLIP14.63□□□□□ -0.07
PRAME-209ENST00000439106 STIM1Q13586 685 aa14.63□□□□□ -0.07
PRAME-209ENST00000439106 MORC3Q14149 939 aa14.63□□□□□ -0.07
PRAME-209ENST00000439106 CAMK4Q16566 473 aa14.63□□□□□ -0.07
PRAME-209ENST00000439106 LPAL2Q16609 132 aa14.63□□□□□ -0.07
PRAME-209ENST00000439106 GAB4Q2WGN9 574 aa14.63□□□□□ -0.07
PRAME-209ENST00000439106 CCDC40Q4G0X9 1142 aa14.63□□□□□ -0.07
PRAME-209ENST00000439106 TTI2Q6NXR4 508 aa14.63□□□□□ -0.07
PRAME-209ENST00000439106 PDZD8Q8NEN9 1154 aa14.63□□□□□ -0.07
PRAME-209ENST00000439106 NELFBQ8WX92 580 aa14.63□□□□□ -0.07
PRAME-209ENST00000439106 OVCA2Q8WZ82 227 aa14.63□□□□□ -0.07
PRAME-209ENST00000439106 P2RY13Q9BPV8 354 aa14.63□□□□□ -0.07
PRAME-209ENST00000439106 IER2Q9BTL4 223 aa14.63□□□□□ -0.07
PRAME-209ENST00000439106 OSER1Q9NX31 292 aa14.63□□□□□ -0.07
PRAME-209ENST00000439106 ARMCX3Q9UH62 379 aaPredicted RBP14.63□□□□□ -0.07
PRAME-209ENST00000439106 NUDT5Q9UKK9 219 aa14.63□□□□□ -0.07
PRAME-209ENST00000439106 PCDHGA2Q9Y5H1 932 aa14.63□□□□□ -0.07
PRAME-209ENST00000439106 DMXL1Q9Y485 3027 aa14.63□□□□□ -0.07
PRAME-209ENST00000439106 THADAQ6YHU6 1953 aa14.62□□□□□ -0.07
PRAME-209ENST00000439106 ABCA7Q8IZY2 2146 aa14.62□□□□□ -0.07
PRAME-209ENST00000439106 MDM4O15151 490 aa14.62□□□□□ -0.07
PRAME-209ENST00000439106 STX10O60499 249 aa14.62□□□□□ -0.07
PRAME-209ENST00000439106 NFATC1O95644 943 aa14.62□□□□□ -0.07
PRAME-209ENST00000439106 TBX18O95935 607 aa14.62□□□□□ -0.07
PRAME-209ENST00000439106 ZDHHC11BP0C7U3 371 aa14.62□□□□□ -0.07
PRAME-209ENST00000439106 PFKLP17858 780 aa14.62□□□□□ -0.07
PRAME-209ENST00000439106 ACO1P21399 889 aaKnown RBP14.62□□□□□ -0.07
PRAME-209ENST00000439106 OPRD1P41143 372 aa14.62□□□□□ -0.07
PRAME-209ENST00000439106 PXNP49023 591 aaPredicted RBP14.62□□□□□ -0.07
PRAME-209ENST00000439106 RAD23BP54727 409 aa14.62□□□□□ -0.07
PRAME-209ENST00000439106 HECTD3Q5T447 861 aa14.62□□□□□ -0.07
PRAME-209ENST00000439106 C12orf40Q86WS4 652 aa14.62□□□□□ -0.07
PRAME-209ENST00000439106 ELOA2Q8IYF1 753 aaPredicted RBP14.62□□□□□ -0.07
PRAME-209ENST00000439106 NUP205Q92621 2012 aa14.62□□□□□ -0.07
PRAME-209ENST00000439106 CD101Q93033 1021 aa14.62□□□□□ -0.07
PRAME-209ENST00000439106 DHTKD1Q96HY7 919 aaPredicted RBP14.62□□□□□ -0.07
PRAME-209ENST00000439106 HEXIM2Q96MH2 286 aaKnown RBP14.62□□□□□ -0.07
PRAME-209ENST00000439106 SEMA4AQ9H3S1 761 aa14.62□□□□□ -0.07
PRAME-209ENST00000439106 NMUR1Q9HB89 426 aa14.62□□□□□ -0.07
PRAME-209ENST00000439106 SMG5Q9UPR3 1016 aaKnown RBP14.62□□□□□ -0.07
PRAME-209ENST00000439106 CEP192Q8TEP8 1941 aa14.62□□□□□ -0.07
PRAME-209ENST00000439106 TLR5O60602 858 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms