RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 CDKN1CP49918 316 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P18-201ENST00000438801 EEFSECP57772 596 aaKnown RBP3.73□□□□□ -1.81
HMGB1P18-201ENST00000438801 NOGQ13253 232 aa3.73□□□□□ -1.81
HMGB1P18-201ENST00000438801 PTPN21Q16825 1174 aa3.73□□□□□ -1.81
HMGB1P18-201ENST00000438801 SUPT20HL1Q3ZLR7 823 aa3.73□□□□□ -1.81
HMGB1P18-201ENST00000438801 THEMIS2Q5TEJ8 643 aa3.73□□□□□ -1.81
HMGB1P18-201ENST00000438801 ICE2Q659A1 982 aa3.73□□□□□ -1.81
HMGB1P18-201ENST00000438801 SFRP4Q6FHJ7 346 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P18-201ENST00000438801 SLC18B1Q6NT16 456 aa3.73□□□□□ -1.81
HMGB1P18-201ENST00000438801 TMEM108Q6UXF1 575 aa3.73□□□□□ -1.81
HMGB1P18-201ENST00000438801 MAVSQ7Z434 540 aa3.73□□□□□ -1.81
HMGB1P18-201ENST00000438801 WDR53Q7Z5U6 358 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P18-201ENST00000438801 FAM46DQ8NEK8 389 aa3.73□□□□□ -1.81
HMGB1P18-201ENST00000438801 ZNF48Q96MX3 618 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P18-201ENST00000438801 SLC13A1Q9BZW2 595 aa3.73□□□□□ -1.81
HMGB1P18-201ENST00000438801 MRPL46Q9H2W6 279 aaKnown RBP3.73□□□□□ -1.81
HMGB1P18-201ENST00000438801 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P18-201ENST00000438801 DLL3Q9NYJ7 618 aa3.73□□□□□ -1.81
HMGB1P18-201ENST00000438801 ABCF2Q9UG63 623 aa3.73□□□□□ -1.81
HMGB1P18-201ENST00000438801 FEZ2Q9UHY8 353 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P18-201ENST00000438801 ABT1Q9ULW3 272 aaKnown RBP3.73□□□□□ -1.81
HMGB1P18-201ENST00000438801 NCOR2Q9Y618 2525 aa3.73□□□□□ -1.81
HMGB1P18-201ENST00000438801 USP24Q9UPU5 2620 aa3.72□□□□□ -1.81
HMGB1P18-201ENST00000438801 PRRT4C9JH25 899 aa3.72□□□□□ -1.81
HMGB1P18-201ENST00000438801 MOSPD3O75425 235 aa3.72□□□□□ -1.81
HMGB1P18-201ENST00000438801 ZRANB2O95218 330 aaKnown RBP eCLIP3.72□□□□□ -1.81
HMGB1P18-201ENST00000438801 PDCP20941 246 aa3.72□□□□□ -1.81
HMGB1P18-201ENST00000438801 LIPAP38571 399 aa3.72□□□□□ -1.81
HMGB1P18-201ENST00000438801 CLCN2P51788 898 aa3.72□□□□□ -1.81
HMGB1P18-201ENST00000438801 ZNF134P52741 427 aa3.72□□□□□ -1.81
HMGB1P18-201ENST00000438801 HK3P52790 923 aa3.72□□□□□ -1.81
HMGB1P18-201ENST00000438801 ST3GAL2Q16842 350 aa3.72□□□□□ -1.81
HMGB1P18-201ENST00000438801 PCID2Q5JVF3 399 aa3.72□□□□□ -1.81
HMGB1P18-201ENST00000438801 TREML2Q5T2D2 321 aa3.72□□□□□ -1.81
HMGB1P18-201ENST00000438801 FAM160B1Q5W0V3 765 aa3.72□□□□□ -1.81
HMGB1P18-201ENST00000438801 HEATR3Q7Z4Q2 680 aa3.72□□□□□ -1.81
HMGB1P18-201ENST00000438801 CPA6Q8N4T0 437 aa3.72□□□□□ -1.81
HMGB1P18-201ENST00000438801 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.72□□□□□ -1.81
HMGB1P18-201ENST00000438801 DENND1AQ8TEH3 1009 aa3.72□□□□□ -1.81
HMGB1P18-201ENST00000438801 RGMAQ96B86 450 aa3.72□□□□□ -1.81
HMGB1P18-201ENST00000438801 SLC46A1Q96NT5 459 aa3.72□□□□□ -1.81
HMGB1P18-201ENST00000438801 DUSP22Q9NRW4 184 aa3.72□□□□□ -1.81
HMGB1P18-201ENST00000438801 SH2B3Q9UQQ2 575 aa3.72□□□□□ -1.81
HMGB1P18-201ENST00000438801 TBC1D30Q9Y2I9 924 aa3.72□□□□□ -1.81
HMGB1P18-201ENST00000438801 CHD2O14647 1828 aaKnown RBP3.72□□□□□ -1.81
HMGB1P18-201ENST00000438801 TNKSO95271 1327 aa3.71□□□□□ -1.81
HMGB1P18-201ENST00000438801 MYO1FO00160 1098 aa3.71□□□□□ -1.82
HMGB1P18-201ENST00000438801 KCNAB3O43448 404 aa3.71□□□□□ -1.82
HMGB1P18-201ENST00000438801 DTNBO60941 627 aa3.71□□□□□ -1.82
HMGB1P18-201ENST00000438801 DNAJB5O75953 348 aa3.71□□□□□ -1.82
HMGB1P18-201ENST00000438801 ONECUT2O95948 504 aa3.71□□□□□ -1.82
HMGB1P18-201ENST00000438801 AHSGP02765 367 aa3.71□□□□□ -1.82
HMGB1P18-201ENST00000438801 FTLP02792 175 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P18-201ENST00000438801 IL6RP08887 468 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P18-201ENST00000438801 PIM1P11309 404 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P18-201ENST00000438801 ENGP17813 658 aa3.71□□□□□ -1.82
HMGB1P18-201ENST00000438801 CCND1P24385 295 aa3.71□□□□□ -1.82
HMGB1P18-201ENST00000438801 SP2Q02086 613 aa3.71□□□□□ -1.82
HMGB1P18-201ENST00000438801 FAM50AQ14320 339 aaKnown RBP3.71□□□□□ -1.82
HMGB1P18-201ENST00000438801 TMEM31Q5JXX7 168 aa3.71□□□□□ -1.82
HMGB1P18-201ENST00000438801 SLC2A7Q6PXP3 512 aa3.71□□□□□ -1.82
HMGB1P18-201ENST00000438801 NAPRTQ6XQN6 538 aa3.71□□□□□ -1.82
HMGB1P18-201ENST00000438801 CATSPERGQ6ZRH7 1159 aa3.71□□□□□ -1.82
HMGB1P18-201ENST00000438801 CTU1Q7Z7A3 348 aaKnown RBP3.71□□□□□ -1.82
HMGB1P18-201ENST00000438801 PPP1R3BQ86XI6 285 aa3.71□□□□□ -1.82
HMGB1P18-201ENST00000438801 CAPNS2Q96L46 248 aa3.71□□□□□ -1.82
HMGB1P18-201ENST00000438801 TTYH3Q9C0H2 523 aa3.71□□□□□ -1.82
HMGB1P18-201ENST00000438801 LMBRD1Q9NUN5 540 aa3.71□□□□□ -1.82
HMGB1P18-201ENST00000438801 HESX1Q9UBX0 185 aa3.71□□□□□ -1.82
HMGB1P18-201ENST00000438801 SERTAD3Q9UJW9 196 aa3.71□□□□□ -1.82
HMGB1P18-201ENST00000438801 SSX2IPQ9Y2D8 614 aa3.71□□□□□ -1.82
HMGB1P18-201ENST00000438801 PCDHA1Q9Y5I3 950 aa3.71□□□□□ -1.82
HMGB1P18-201ENST00000438801 REV3LO60673 3130 aa3.71□□□□□ -1.82
HMGB1P18-201ENST00000438801 ZFHX2Q9C0A1 2572 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P18-201ENST00000438801 KIAA0100Q14667 2235 aaKnown RBP3.71□□□□□ -1.82
HMGB1P18-201ENST00000438801 SLIT1O75093 1534 aa3.7□□□□□ -1.82
HMGB1P18-201ENST00000438801 PTPN23Q9H3S7 1636 aa3.7□□□□□ -1.82
HMGB1P18-201ENST00000438801 ZFYVE26Q68DK2 2539 aa3.7□□□□□ -1.82
HMGB1P18-201ENST00000438801 ALG1L2C9J202 215 aa3.7□□□□□ -1.82
HMGB1P18-201ENST00000438801 PPEF2O14830 753 aa3.7□□□□□ -1.82
HMGB1P18-201ENST00000438801 DCLK1O15075 740 aa3.7□□□□□ -1.82
HMGB1P18-201ENST00000438801 ATXN1LP0C7T5 689 aaKnown RBP3.7□□□□□ -1.82
HMGB1P18-201ENST00000438801 TYRP14679 529 aa3.7□□□□□ -1.82
HMGB1P18-201ENST00000438801 PXNP49023 591 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P18-201ENST00000438801 MAP2K6P52564 334 aa3.7□□□□□ -1.82
HMGB1P18-201ENST00000438801 LOXL3P58215 753 aa3.7□□□□□ -1.82
HMGB1P18-201ENST00000438801 CYP4F2P78329 520 aa3.7□□□□□ -1.82
HMGB1P18-201ENST00000438801 HOXA4Q00056 320 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P18-201ENST00000438801 EXOSC9Q06265 439 aaKnown RBP3.7□□□□□ -1.82
HMGB1P18-201ENST00000438801 LONRF3Q496Y0 759 aa3.7□□□□□ -1.82
HMGB1P18-201ENST00000438801 RNF187Q5TA31 235 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P18-201ENST00000438801 LAYNQ6UX15 382 aa3.7□□□□□ -1.82
HMGB1P18-201ENST00000438801 CHSY1Q86X52 802 aa3.7□□□□□ -1.82
HMGB1P18-201ENST00000438801 PRR18Q8N4B5 295 aa3.7□□□□□ -1.82
HMGB1P18-201ENST00000438801 LRRC71Q8N4P6 559 aa3.7□□□□□ -1.82
HMGB1P18-201ENST00000438801 PNLDC1Q8NA58 520 aaKnown RBP3.7□□□□□ -1.82
HMGB1P18-201ENST00000438801 SPATA18Q8TC71 538 aa3.7□□□□□ -1.82
HMGB1P18-201ENST00000438801 FAM167AQ96KS9 214 aa3.7□□□□□ -1.82
HMGB1P18-201ENST00000438801 KRTAP1-5Q9BYS1 174 aa3.7□□□□□ -1.82
HMGB1P18-201ENST00000438801 KIDINS220Q9ULH0 1771 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms