RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 SDHAF4Q5VUM1 108 aa19.36■□□□□ 0.69
HDAC6-208ENST00000438518 ALKBH5Q6P6C2 394 aaKnown RBP19.36■□□□□ 0.69
HDAC6-208ENST00000438518 SYCE2Q6PIF2 218 aa19.36■□□□□ 0.69
HDAC6-208ENST00000438518 TOGARAM2Q6ZUX3 1019 aa19.36■□□□□ 0.69
HDAC6-208ENST00000438518 TMEM139Q8IV31 216 aa19.36■□□□□ 0.69
HDAC6-208ENST00000438518 CPA5Q8WXQ8 436 aa19.36■□□□□ 0.69
HDAC6-208ENST00000438518 SMG7Q92540 1137 aaKnown RBP19.36■□□□□ 0.69
HDAC6-208ENST00000438518 C18orf8Q96DM3 657 aa19.36■□□□□ 0.69
HDAC6-208ENST00000438518 GCNAQ96QF7 691 aa19.36■□□□□ 0.69
HDAC6-208ENST00000438518 CPXM1Q96SM3 734 aa19.36■□□□□ 0.69
HDAC6-208ENST00000438518 CYTH4Q9UIA0 394 aa19.36■□□□□ 0.69
HDAC6-208ENST00000438518 COG5Q9UP83 839 aa19.36■□□□□ 0.69
HDAC6-208ENST00000438518 C2orf16Q68DN1 1984 aa19.35■□□□□ 0.69
HDAC6-208ENST00000438518 OBSL1O75147 1896 aa19.35■□□□□ 0.69
HDAC6-208ENST00000438518 CLUHO75153 1309 aa19.35■□□□□ 0.69
HDAC6-208ENST00000438518 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.35■□□□□ 0.69
HDAC6-208ENST00000438518 SOBPA7XYQ1 873 aa19.35■□□□□ 0.69
HDAC6-208ENST00000438518 E5RJQ4 531 aa19.35■□□□□ 0.69
HDAC6-208ENST00000438518 ZNF197O14709 1029 aa19.35■□□□□ 0.69
HDAC6-208ENST00000438518 ARHGAP6O43182 974 aa19.35■□□□□ 0.69
HDAC6-208ENST00000438518 LCA5LO95447 670 aa19.35■□□□□ 0.69
HDAC6-208ENST00000438518 ZBED1O96006 694 aa19.35■□□□□ 0.69
HDAC6-208ENST00000438518 GLI1P08151 1106 aa19.35■□□□□ 0.69
HDAC6-208ENST00000438518 CDC25CP30307 473 aa19.35■□□□□ 0.69
HDAC6-208ENST00000438518 LTBRP36941 435 aa19.35■□□□□ 0.69
HDAC6-208ENST00000438518 RGS7P49802 495 aa19.35■□□□□ 0.69
HDAC6-208ENST00000438518 GFPT1Q06210 699 aaPredicted RBP19.35■□□□□ 0.69
HDAC6-208ENST00000438518 RARS2Q5T160 578 aaKnown RBP19.35■□□□□ 0.69
HDAC6-208ENST00000438518 TMC5Q6UXY8 1006 aa19.35■□□□□ 0.69
HDAC6-208ENST00000438518 MON1BQ7L1V2 547 aa19.35■□□□□ 0.69
HDAC6-208ENST00000438518 GPRIN1Q7Z2K8 1008 aa19.35■□□□□ 0.69
HDAC6-208ENST00000438518 MON1AQ86VX9 555 aa19.35■□□□□ 0.69
HDAC6-208ENST00000438518 TMC8Q8IU68 726 aa19.35■□□□□ 0.69
HDAC6-208ENST00000438518 GOLGA1Q92805 767 aa19.35■□□□□ 0.69
HDAC6-208ENST00000438518 FBXO32Q969P5 355 aa19.35■□□□□ 0.69
HDAC6-208ENST00000438518 RIPOR3Q96MK2 946 aa19.35■□□□□ 0.69
HDAC6-208ENST00000438518 NECTIN4Q96NY8 510 aa19.35■□□□□ 0.69
HDAC6-208ENST00000438518 TLR8Q9NR97 1041 aaKnown RBP19.35■□□□□ 0.69
HDAC6-208ENST00000438518 ASNSD1Q9NWL6 643 aa19.35■□□□□ 0.69
HDAC6-208ENST00000438518 ADAM22Q9P0K1 906 aa19.35■□□□□ 0.69
HDAC6-208ENST00000438518 NENFQ9UMX5 172 aa19.35■□□□□ 0.69
HDAC6-208ENST00000438518 MAGED2Q9UNF1 606 aaPredicted RBP19.35■□□□□ 0.69
HDAC6-208ENST00000438518 DENND4CQ5VZ89 1909 aa19.35■□□□□ 0.69
HDAC6-208ENST00000438518 EIF3CLB5ME19 914 aaKnown RBP19.34■□□□□ 0.69
HDAC6-208ENST00000438518 LCP1P13796 627 aa19.34■□□□□ 0.69
HDAC6-208ENST00000438518 PFKLP17858 780 aa19.34■□□□□ 0.69
HDAC6-208ENST00000438518 MTHFRP42898 656 aa19.34■□□□□ 0.69
HDAC6-208ENST00000438518 DAOAP59103 153 aa19.34■□□□□ 0.69
HDAC6-208ENST00000438518 MRPS5P82675 430 aaKnown RBP19.34■□□□□ 0.69
HDAC6-208ENST00000438518 ZNF268Q14587 947 aaPredicted RBP19.34■□□□□ 0.69
HDAC6-208ENST00000438518 SPA17Q15506 151 aa19.34■□□□□ 0.69
HDAC6-208ENST00000438518 EFHC1Q5JVL4 640 aa19.34■□□□□ 0.69
HDAC6-208ENST00000438518 ATAT1Q5SQI0 421 aa19.34■□□□□ 0.69
HDAC6-208ENST00000438518 CCDC122Q5T0U0 273 aa19.34■□□□□ 0.69
HDAC6-208ENST00000438518 SNX30Q5VWJ9 437 aa19.34■□□□□ 0.69
HDAC6-208ENST00000438518 PDZD4Q76G19 769 aaPredicted RBP19.34■□□□□ 0.69
HDAC6-208ENST00000438518 BEND5Q7L4P6 421 aa19.34■□□□□ 0.69
HDAC6-208ENST00000438518 SMRP1Q8NCR6 262 aa19.34■□□□□ 0.69
HDAC6-208ENST00000438518 GPR152Q8TDT2 470 aa19.34■□□□□ 0.69
HDAC6-208ENST00000438518 EIF3CQ99613 913 aaKnown RBP19.34■□□□□ 0.69
HDAC6-208ENST00000438518 CORO1BQ9BR76 489 aa19.34■□□□□ 0.69
HDAC6-208ENST00000438518 LRRC3Q9BY71 257 aa19.34■□□□□ 0.69
HDAC6-208ENST00000438518 ULBP1Q9BZM6 244 aa19.34■□□□□ 0.69
HDAC6-208ENST00000438518 UBE2ZQ9H832 354 aaPredicted RBP19.34■□□□□ 0.69
HDAC6-208ENST00000438518 EPN1Q9Y6I3 576 aaPredicted RBP19.34■□□□□ 0.69
HDAC6-208ENST00000438518 DENND4AQ7Z401 1863 aa19.33■□□□□ 0.69
HDAC6-208ENST00000438518 PAPSS1O43252 624 aaPredicted RBP19.33■□□□□ 0.68
HDAC6-208ENST00000438518 NDUFA10O95299 355 aa19.33■□□□□ 0.68
HDAC6-208ENST00000438518 FTLP02792 175 aaPredicted RBP19.33■□□□□ 0.68
HDAC6-208ENST00000438518 RHOP08100 348 aa19.33■□□□□ 0.68
HDAC6-208ENST00000438518 ZDHHC11BP0C7U3 371 aa19.33■□□□□ 0.68
HDAC6-208ENST00000438518 DDX6P26196 483 aaKnown RBP eCLIP19.33■□□□□ 0.68
HDAC6-208ENST00000438518 USP46P62068 366 aa19.33■□□□□ 0.68
HDAC6-208ENST00000438518 TAF10Q12962 218 aa19.33■□□□□ 0.68
HDAC6-208ENST00000438518 MTMR3Q13615 1198 aa19.33■□□□□ 0.68
HDAC6-208ENST00000438518 SKIV2LQ15477 1246 aaKnown RBP19.33■□□□□ 0.68
HDAC6-208ENST00000438518 EP400NLQ6ZTU2 488 aa19.33■□□□□ 0.68
HDAC6-208ENST00000438518 ARCQ7LC44 396 aa19.33■□□□□ 0.68
HDAC6-208ENST00000438518 MCOLN2Q8IZK6 566 aa19.33■□□□□ 0.68
HDAC6-208ENST00000438518 TXLNBQ8N3L3 684 aa19.33■□□□□ 0.68
HDAC6-208ENST00000438518 ZNF276Q8N554 614 aa19.33■□□□□ 0.68
HDAC6-208ENST00000438518 STKLD1Q8NE28 680 aa19.33■□□□□ 0.68
HDAC6-208ENST00000438518 SCAMP5Q8TAC9 235 aa19.33■□□□□ 0.68
HDAC6-208ENST00000438518 HLA-CQ95604 372 aa19.33■□□□□ 0.68
HDAC6-208ENST00000438518 CDK5RAP1Q96SZ6 601 aaKnown RBP19.33■□□□□ 0.68
HDAC6-208ENST00000438518 C11orf70Q9BRQ4 267 aa19.33■□□□□ 0.68
HDAC6-208ENST00000438518 S1PR5Q9H228 398 aa19.33■□□□□ 0.68
HDAC6-208ENST00000438518 CLIC5Q9NZA1 410 aa19.33■□□□□ 0.68
HDAC6-208ENST00000438518 TRPM5Q9NZQ8 1165 aa19.33■□□□□ 0.68
HDAC6-208ENST00000438518 DNMT3BQ9UBC3 853 aaKnown RBP19.33■□□□□ 0.68
HDAC6-208ENST00000438518 CD207Q9UJ71 328 aa19.33■□□□□ 0.68
HDAC6-208ENST00000438518 INTUQ9ULD6 942 aa19.33■□□□□ 0.68
HDAC6-208ENST00000438518 ANKRD62A6NC57 917 aa19.32■□□□□ 0.68
HDAC6-208ENST00000438518 SOWAHDA6NJG2 315 aa19.32■□□□□ 0.68
HDAC6-208ENST00000438518 ERBB2P04626 1255 aa19.32■□□□□ 0.68
HDAC6-208ENST00000438518 GABRR2P28476 465 aa19.32■□□□□ 0.68
HDAC6-208ENST00000438518 TUBP50607 506 aa19.32■□□□□ 0.68
HDAC6-208ENST00000438518 KRT83P78385 493 aa19.32■□□□□ 0.68
HDAC6-208ENST00000438518 SLC6A3Q01959 620 aa19.32■□□□□ 0.68
HDAC6-208ENST00000438518 DLX2Q07687 328 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms