RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 SMC1BQ8NDV3 1235 aa12.9□□□□□ -0.34
TMEM116-202ENST00000437003 OR6Y1Q8NGX8 325 aa12.9□□□□□ -0.34
TMEM116-202ENST00000437003 RMI1Q9H9A7 625 aa12.9□□□□□ -0.34
TMEM116-202ENST00000437003 APOBEC3GQ9HC16 384 aaKnown RBP12.9□□□□□ -0.34
TMEM116-202ENST00000437003 KIAA1217Q5T5P2 1943 aa12.9□□□□□ -0.34
TMEM116-202ENST00000437003 CCDC160A6NGH7 325 aa12.89□□□□□ -0.35
TMEM116-202ENST00000437003 ARHGAP42A6NI28 874 aa12.89□□□□□ -0.35
TMEM116-202ENST00000437003 ZC3H11AO75152 810 aaKnown RBP eCLIP12.89□□□□□ -0.35
TMEM116-202ENST00000437003 KRT1P04264 644 aa12.89□□□□□ -0.35
TMEM116-202ENST00000437003 ACTR3P61158 418 aa12.89□□□□□ -0.35
TMEM116-202ENST00000437003 ACTR2P61160 394 aa12.89□□□□□ -0.35
TMEM116-202ENST00000437003 DYNLT1P63172 113 aa12.89□□□□□ -0.35
TMEM116-202ENST00000437003 MAMLD1Q13495 774 aa12.89□□□□□ -0.35
TMEM116-202ENST00000437003 TRMT5Q32P41 509 aaKnown RBP12.89□□□□□ -0.35
TMEM116-202ENST00000437003 NET1Q7Z628 596 aaPredicted RBP12.89□□□□□ -0.35
TMEM116-202ENST00000437003 SDCCAG8Q86SQ7 713 aaPredicted RBP12.89□□□□□ -0.35
TMEM116-202ENST00000437003 ARID3BQ8IVW6 561 aaPredicted RBP12.89□□□□□ -0.35
TMEM116-202ENST00000437003 ALLCQ8N6M5 410 aa12.89□□□□□ -0.35
TMEM116-202ENST00000437003 FBXO36Q8NEA4 188 aa12.89□□□□□ -0.35
TMEM116-202ENST00000437003 SERAC1Q96JX3 654 aa12.89□□□□□ -0.35
TMEM116-202ENST00000437003 FAM81BQ96LP2 452 aa12.89□□□□□ -0.35
TMEM116-202ENST00000437003 AVENQ9NQS1 362 aaPredicted RBP12.89□□□□□ -0.35
TMEM116-202ENST00000437003 PDLIM7Q9NR12 457 aa12.89□□□□□ -0.35
TMEM116-202ENST00000437003 ARHGAP28Q9P2N2 729 aa12.89□□□□□ -0.35
TMEM116-202ENST00000437003 AGO2Q9UKV8 859 aaKnown RBP12.89□□□□□ -0.35
TMEM116-202ENST00000437003 TNS1Q9HBL0 1735 aaKnown RBP12.89□□□□□ -0.35
TMEM116-202ENST00000437003 F8W8V4 182 aa12.89□□□□□ -0.35
TMEM116-202ENST00000437003 PSTPIP1O43586 416 aa12.89□□□□□ -0.35
TMEM116-202ENST00000437003 MAGEC1O60732 1142 aa12.89□□□□□ -0.35
TMEM116-202ENST00000437003 TM7SF2O76062 418 aa12.89□□□□□ -0.35
TMEM116-202ENST00000437003 HMGCS2P54868 508 aa12.89□□□□□ -0.35
TMEM116-202ENST00000437003 MED21Q13503 144 aa12.89□□□□□ -0.35
TMEM116-202ENST00000437003 WDR81Q562E7 1941 aa12.89□□□□□ -0.35
TMEM116-202ENST00000437003 ADGRD1Q6QNK2 874 aa12.89□□□□□ -0.35
TMEM116-202ENST00000437003 PALM2Q8IXS6 379 aa12.89□□□□□ -0.35
TMEM116-202ENST00000437003 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.89□□□□□ -0.35
TMEM116-202ENST00000437003 TRIM11Q96F44 468 aa12.89□□□□□ -0.35
TMEM116-202ENST00000437003 RBAKQ9NYW8 714 aaPredicted RBP12.89□□□□□ -0.35
TMEM116-202ENST00000437003 HACL1Q9UJ83 578 aa12.89□□□□□ -0.35
TMEM116-202ENST00000437003 CHMP2BQ9UQN3 213 aa12.89□□□□□ -0.35
TMEM116-202ENST00000437003 SPECC1L-ADORA2AF8WAN1 911 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 EXTL3O43909 919 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 VNN1O95497 513 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 PHBP35232 272 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 AQP4P55087 323 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 NOMO3P69849 1222 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 DLG1Q12959 904 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 CUL2Q13617 745 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 ZACNQ401N2 412 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 KATNAL2Q8IYT4 538 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 TTC30BQ8N4P2 665 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 ATP11CQ8NB49 1132 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 ZNF280CQ8ND82 737 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 EXD1Q8NHP7 514 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 MZB1Q8WU39 189 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 USP6NLQ92738 828 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 CCDC124Q96CT7 223 aaKnown RBP12.88□□□□□ -0.35
TMEM116-202ENST00000437003 WDR83Q9BRX9 315 aaKnown RBP12.88□□□□□ -0.35
TMEM116-202ENST00000437003 PICK1Q9NRD5 415 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 TMCO1Q9UM00 188 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 ZNF541Q9H0D2 1346 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 H0YCG3 227 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 ZSCAN9O15535 394 aaPredicted RBP12.88□□□□□ -0.35
TMEM116-202ENST00000437003 SORBS2O94875 1100 aaKnown RBP12.88□□□□□ -0.35
TMEM116-202ENST00000437003 HIRAP54198 1017 aaPredicted RBP12.88□□□□□ -0.35
TMEM116-202ENST00000437003 ZNF280AP59817 542 aaPredicted RBP12.88□□□□□ -0.35
TMEM116-202ENST00000437003 BPIFB4P59827 614 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 ASPHQ12797 758 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 UBAP2LQ14157 1087 aaKnown RBP12.88□□□□□ -0.35
TMEM116-202ENST00000437003 TTLL12Q14166 644 aaPredicted RBP12.88□□□□□ -0.35
TMEM116-202ENST00000437003 MAP7Q14244 749 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 PRAMEF18Q5VWM3 479 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 C15orf39Q6ZRI6 1047 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 ACAD11Q709F0 780 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 OR5B17Q8NGF7 314 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 SLC26A7Q8TE54 656 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 DCAKDQ8WVC6 231 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 CDHR1Q96JP9 859 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 RILPQ96NA2 401 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 WRNIP1Q96S55 665 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 TARS2Q9BW92 718 aaKnown RBP12.88□□□□□ -0.35
TMEM116-202ENST00000437003 HAPLN2Q9GZV7 340 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 MRPL47Q9HD33 250 aaKnown RBP12.88□□□□□ -0.35
TMEM116-202ENST00000437003 DDX18Q9NVP1 670 aaKnown RBP12.88□□□□□ -0.35
TMEM116-202ENST00000437003 PIM2Q9P1W9 311 aa12.88□□□□□ -0.35
TMEM116-202ENST00000437003 ZNF214Q9UL59 606 aaPredicted RBP12.88□□□□□ -0.35
TMEM116-202ENST00000437003 PRR5-ARHGAP8B1AHC4 643 aa12.87□□□□□ -0.35
TMEM116-202ENST00000437003 BUD23O43709 281 aaKnown RBP12.87□□□□□ -0.35
TMEM116-202ENST00000437003 PABPC4LP0CB38 370 aaKnown RBP12.87□□□□□ -0.35
TMEM116-202ENST00000437003 PEX2P28328 305 aa12.87□□□□□ -0.35
TMEM116-202ENST00000437003 EPHB1P54762 984 aa12.87□□□□□ -0.35
TMEM116-202ENST00000437003 ARHGAP8P85298 464 aa12.87□□□□□ -0.35
TMEM116-202ENST00000437003 PTK7Q13308 1070 aa12.87□□□□□ -0.35
TMEM116-202ENST00000437003 TMEM132BQ14DG7 1078 aa12.87□□□□□ -0.35
TMEM116-202ENST00000437003 ABHD15Q6UXT9 468 aa12.87□□□□□ -0.35
TMEM116-202ENST00000437003 MICALL2Q8IY33 904 aa12.87□□□□□ -0.35
TMEM116-202ENST00000437003 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.87□□□□□ -0.35
TMEM116-202ENST00000437003 ACAP3Q96P50 834 aa12.87□□□□□ -0.35
TMEM116-202ENST00000437003 MCEEQ96PE7 176 aa12.87□□□□□ -0.35
TMEM116-202ENST00000437003 AS3MTQ9HBK9 375 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms