RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 RAD9BQ6WBX8 426 aa11.61□□□□□ -0.55
HMGCL-204ENST00000436439 GAREM2Q75VX8 874 aa11.61□□□□□ -0.55
HMGCL-204ENST00000436439 MFSD6LQ8IWD5 586 aa11.61□□□□□ -0.55
HMGCL-204ENST00000436439 UBR7Q8N806 425 aa11.61□□□□□ -0.55
HMGCL-204ENST00000436439 LEMD2Q8NC56 503 aa11.61□□□□□ -0.55
HMGCL-204ENST00000436439 ZBTB44Q8NCP5 570 aa11.61□□□□□ -0.55
HMGCL-204ENST00000436439 NELL1Q92832 810 aa11.61□□□□□ -0.55
HMGCL-204ENST00000436439 IRF7Q92985 503 aa11.61□□□□□ -0.55
HMGCL-204ENST00000436439 NELL2Q99435 816 aa11.61□□□□□ -0.55
HMGCL-204ENST00000436439 HINFPQ9BQA5 517 aa11.61□□□□□ -0.55
HMGCL-204ENST00000436439 OXCT2Q9BYC2 517 aaPredicted RBP11.61□□□□□ -0.55
HMGCL-204ENST00000436439 NIF3L1Q9GZT8 377 aa11.61□□□□□ -0.55
HMGCL-204ENST00000436439 NHEJ1Q9H9Q4 299 aaPredicted RBP11.61□□□□□ -0.55
HMGCL-204ENST00000436439 PRMT8Q9NR22 394 aaPredicted RBP11.61□□□□□ -0.55
HMGCL-204ENST00000436439 PPP2R2CQ9Y2T4 447 aa11.61□□□□□ -0.55
HMGCL-204ENST00000436439 DNAH14Q0VDD8 3507 aa11.61□□□□□ -0.55
HMGCL-204ENST00000436439 ZNF292O60281 2723 aa11.61□□□□□ -0.55
HMGCL-204ENST00000436439 EIF3CLB5ME19 914 aaKnown RBP11.6□□□□□ -0.55
HMGCL-204ENST00000436439 TULP1O00294 542 aaPredicted RBP11.6□□□□□ -0.55
HMGCL-204ENST00000436439 NCAM2O15394 837 aa11.6□□□□□ -0.55
HMGCL-204ENST00000436439 GFPT2O94808 682 aa11.6□□□□□ -0.55
HMGCL-204ENST00000436439 NDUFA10O95299 355 aa11.6□□□□□ -0.55
HMGCL-204ENST00000436439 CYP11A1P05108 521 aa11.6□□□□□ -0.55
HMGCL-204ENST00000436439 ODC1P11926 461 aa11.6□□□□□ -0.55
HMGCL-204ENST00000436439 POLR2BP30876 1174 aaKnown RBP11.6□□□□□ -0.55
HMGCL-204ENST00000436439 CYLC1P35663 651 aaPredicted RBP11.6□□□□□ -0.55
HMGCL-204ENST00000436439 PNPLA4P41247 253 aa11.6□□□□□ -0.55
HMGCL-204ENST00000436439 EPHB3P54753 998 aa11.6□□□□□ -0.55
HMGCL-204ENST00000436439 KLHL30Q0D2K2 578 aa11.6□□□□□ -0.55
HMGCL-204ENST00000436439 MYO1EQ12965 1108 aa11.6□□□□□ -0.55
HMGCL-204ENST00000436439 ARHGAP44Q17R89 818 aa11.6□□□□□ -0.55
HMGCL-204ENST00000436439 ZNF667Q5HYK9 610 aa11.6□□□□□ -0.55
HMGCL-204ENST00000436439 SCARA3Q6AZY7 606 aa11.6□□□□□ -0.55
HMGCL-204ENST00000436439 SPOPLQ6IQ16 392 aa11.6□□□□□ -0.55
HMGCL-204ENST00000436439 REXO1L1PQ8IX06 675 aa11.6□□□□□ -0.55
HMGCL-204ENST00000436439 DEPDC1BQ8WUY9 529 aa11.6□□□□□ -0.55
HMGCL-204ENST00000436439 FAM3CQ92520 227 aa11.6□□□□□ -0.55
HMGCL-204ENST00000436439 RUBCNQ92622 972 aa11.6□□□□□ -0.55
HMGCL-204ENST00000436439 KAT5Q92993 513 aa11.6□□□□□ -0.55
HMGCL-204ENST00000436439 LRRC3BQ96PB8 259 aa11.6□□□□□ -0.55
HMGCL-204ENST00000436439 EIF3CQ99613 913 aaKnown RBP11.6□□□□□ -0.55
HMGCL-204ENST00000436439 LPIN3Q9BQK8 851 aa11.6□□□□□ -0.55
HMGCL-204ENST00000436439 SLITRK6Q9H5Y7 841 aa11.6□□□□□ -0.55
HMGCL-204ENST00000436439 TRPV5Q9NQA5 729 aa11.6□□□□□ -0.55
HMGCL-204ENST00000436439 AGAP1Q9UPQ3 857 aa11.6□□□□□ -0.55
HMGCL-204ENST00000436439 MRPS17Q9Y2R5 130 aaKnown RBP11.6□□□□□ -0.55
HMGCL-204ENST00000436439 EPN1Q9Y6I3 576 aaPredicted RBP11.6□□□□□ -0.55
HMGCL-204ENST00000436439 PIAS3Q9Y6X2 628 aa11.6□□□□□ -0.55
HMGCL-204ENST00000436439 GVINP1Q7Z2Y8 2422 aa11.6□□□□□ -0.55
HMGCL-204ENST00000436439 WDR87Q6ZQQ6 2873 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 MAN2B1O00754 1011 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 ZNF263O14978 683 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 CTIFO43310 598 aaKnown RBP11.59□□□□□ -0.55
HMGCL-204ENST00000436439 LILRB5O75023 590 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 KRT19P08727 400 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 TDGF1P13385 188 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 P4HA1P13674 534 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 ATF6P18850 670 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 ACO1P21399 889 aaKnown RBP11.59□□□□□ -0.55
HMGCL-204ENST00000436439 PAX3P23760 479 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 ASPAP45381 313 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 ALDH1A3P47895 512 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 SOX9P48436 509 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 YWHAEP62258 255 aaKnown RBP11.59□□□□□ -0.55
HMGCL-204ENST00000436439 ETF1P62495 437 aaKnown RBP11.59□□□□□ -0.55
HMGCL-204ENST00000436439 PLD1Q13393 1074 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 GAS6Q14393 721 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 SLC39A12Q504Y0 691 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 TDRD12Q587J7 1177 aaKnown RBP11.59□□□□□ -0.55
HMGCL-204ENST00000436439 DNAJB7Q7Z6W7 309 aaPredicted RBP11.59□□□□□ -0.55
HMGCL-204ENST00000436439 LRRTM3Q86VH5 581 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 ARID3BQ8IVW6 561 aaPredicted RBP11.59□□□□□ -0.55
HMGCL-204ENST00000436439 TTC39CQ8N584 583 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 ZNF592Q92610 1267 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 PSMG2Q969U7 264 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 HPDLQ96IR7 371 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 CCDC42Q96M95 316 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 ZNF560Q96MR9 790 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 SYT11Q9BT88 431 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 ZCWPW1Q9H0M4 648 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 CHRDQ9H2X0 955 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 HAUS4Q9H6D7 363 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 LMAN1LQ9HAT1 526 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 CYP3A43Q9HB55 503 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 ZSCAN32Q9NX65 697 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 PCDHGA2Q9Y5H1 932 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 ATP8B3O60423 1300 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 OTOGLQ3ZCN5 2332 aa11.59□□□□□ -0.55
HMGCL-204ENST00000436439 SLC38A8A6NNN8 435 aa11.58□□□□□ -0.56
HMGCL-204ENST00000436439 CYB561D2O14569 222 aa11.58□□□□□ -0.56
HMGCL-204ENST00000436439 PLEKP08567 350 aaPredicted RBP11.58□□□□□ -0.56
HMGCL-204ENST00000436439 CCDC175P0C221 793 aa11.58□□□□□ -0.56
HMGCL-204ENST00000436439 FAM163BP0C2L3 166 aa11.58□□□□□ -0.56
HMGCL-204ENST00000436439 CHRNB1P11230 501 aa11.58□□□□□ -0.56
HMGCL-204ENST00000436439 GABRR2P28476 465 aa11.58□□□□□ -0.56
HMGCL-204ENST00000436439 EIF4A3P38919 411 aaKnown RBP11.58□□□□□ -0.56
HMGCL-204ENST00000436439 KIF11P52732 1056 aa11.58□□□□□ -0.56
HMGCL-204ENST00000436439 BPIFB4P59827 614 aa11.58□□□□□ -0.56
HMGCL-204ENST00000436439 CYP4F8P98187 520 aa11.58□□□□□ -0.56
HMGCL-204ENST00000436439 FOXK2Q01167 660 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms