RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 CPQQ9Y646 472 aa16.03■□□□□ 0.16
NELFE-204ENST00000436289 ANK1P16157 1881 aa16.03■□□□□ 0.16
NELFE-204ENST00000436289 A0A1W2PQF6 199 aa16.02■□□□□ 0.16
NELFE-204ENST00000436289 TRIM66O15016 1216 aa16.02■□□□□ 0.16
NELFE-204ENST00000436289 HOXC11O43248 304 aaPredicted RBP16.02■□□□□ 0.16
NELFE-204ENST00000436289 SLC26A4O43511 780 aa16.02■□□□□ 0.16
NELFE-204ENST00000436289 GRIK1P39086 918 aa16.02■□□□□ 0.16
NELFE-204ENST00000436289 ZNF131P52739 623 aa16.02■□□□□ 0.16
NELFE-204ENST00000436289 NOP14P78316 857 aaKnown RBP16.02■□□□□ 0.16
NELFE-204ENST00000436289 KDSRQ06136 332 aa16.02■□□□□ 0.16
NELFE-204ENST00000436289 MESP2Q0VG99 397 aa16.02■□□□□ 0.16
NELFE-204ENST00000436289 LY6G5CQ5SRR4 150 aa16.02■□□□□ 0.16
NELFE-204ENST00000436289 C12orf40Q86WS4 652 aa16.02■□□□□ 0.16
NELFE-204ENST00000436289 ETFBKMTQ8IXQ9 262 aa16.02■□□□□ 0.16
NELFE-204ENST00000436289 RHBDD1Q8TEB9 315 aa16.02■□□□□ 0.16
NELFE-204ENST00000436289 IPO4Q8TEX9 1081 aaKnown RBP16.02■□□□□ 0.16
NELFE-204ENST00000436289 TM7SF3Q9NS93 570 aa16.02■□□□□ 0.16
NELFE-204ENST00000436289 CFAP97Q9P2B7 532 aa16.02■□□□□ 0.16
NELFE-204ENST00000436289 CYP8B1Q9UNU6 501 aa16.02■□□□□ 0.16
NELFE-204ENST00000436289 ANAPC1Q9H1A4 1944 aa16.02■□□□□ 0.15
NELFE-204ENST00000436289 ZNF462Q96JM2 2506 aa16.01■□□□□ 0.15
NELFE-204ENST00000436289 PTPRBP23467 1997 aa16.01■□□□□ 0.15
NELFE-204ENST00000436289 GFRA2O00451 464 aa16.01■□□□□ 0.15
NELFE-204ENST00000436289 TULP3O75386 442 aa16.01■□□□□ 0.15
NELFE-204ENST00000436289 FAM13AO94988 1023 aa16.01■□□□□ 0.15
NELFE-204ENST00000436289 PLA2G2AP14555 144 aa16.01■□□□□ 0.15
NELFE-204ENST00000436289 ACAT1P24752 427 aaKnown RBP16.01■□□□□ 0.15
NELFE-204ENST00000436289 MATKP42679 507 aa16.01■□□□□ 0.15
NELFE-204ENST00000436289 CAMK2BQ13554 666 aa16.01■□□□□ 0.15
NELFE-204ENST00000436289 ARSHQ5FYA8 562 aa16.01■□□□□ 0.15
NELFE-204ENST00000436289 C10orf76Q5T2E6 689 aa16.01■□□□□ 0.15
NELFE-204ENST00000436289 SLC39A4Q6P5W5 647 aa16.01■□□□□ 0.15
NELFE-204ENST00000436289 LRRC69Q6ZNQ3 347 aa16.01■□□□□ 0.15
NELFE-204ENST00000436289 CHPFQ8IZ52 775 aa16.01■□□□□ 0.15
NELFE-204ENST00000436289 TERB1Q8NA31 727 aa16.01■□□□□ 0.15
NELFE-204ENST00000436289 BAHD1Q8TBE0 780 aaPredicted RBP16.01■□□□□ 0.15
NELFE-204ENST00000436289 SLITRK1Q96PX8 696 aa16.01■□□□□ 0.15
NELFE-204ENST00000436289 LLPHQ9BRT6 129 aaKnown RBP16.01■□□□□ 0.15
NELFE-204ENST00000436289 GAREM1Q9H706 876 aa16.01■□□□□ 0.15
NELFE-204ENST00000436289 CDH9Q9ULB4 789 aa16.01■□□□□ 0.15
NELFE-204ENST00000436289 AGAP1Q9UPQ3 857 aa16.01■□□□□ 0.15
NELFE-204ENST00000436289 R3HCC1Q9Y3T6 440 aaKnown RBP16.01■□□□□ 0.15
NELFE-204ENST00000436289 RAI2Q9Y5P3 530 aa16.01■□□□□ 0.15
NELFE-204ENST00000436289 TCHHQ07283 1943 aa16.01■□□□□ 0.15
NELFE-204ENST00000436289 SHROOM3Q8TF72 1996 aa16■□□□□ 0.15
NELFE-204ENST00000436289 OAS1P00973 400 aaKnown RBP16■□□□□ 0.15
NELFE-204ENST00000436289 NDUFV2P19404 249 aa16■□□□□ 0.15
NELFE-204ENST00000436289 CD6P30203 668 aa16■□□□□ 0.15
NELFE-204ENST00000436289 POLR2BP30876 1174 aaKnown RBP16■□□□□ 0.15
NELFE-204ENST00000436289 ZNF132P52740 706 aa16■□□□□ 0.15
NELFE-204ENST00000436289 RBP5P82980 135 aa16■□□□□ 0.15
NELFE-204ENST00000436289 SMAD1Q15797 465 aaKnown RBP16■□□□□ 0.15
NELFE-204ENST00000436289 IL17AQ16552 155 aa16■□□□□ 0.15
NELFE-204ENST00000436289 TDRD10Q5VZ19 366 aaKnown RBP16■□□□□ 0.15
NELFE-204ENST00000436289 ADGRF2Q8IZF7 708 aa16■□□□□ 0.15
NELFE-204ENST00000436289 C8orf48Q96LL4 319 aa16■□□□□ 0.15
NELFE-204ENST00000436289 GABRG3Q99928 467 aa16■□□□□ 0.15
NELFE-204ENST00000436289 ST6GALNAC4Q9H4F1 302 aa16■□□□□ 0.15
NELFE-204ENST00000436289 ZDHHC4Q9NPG8 344 aa16■□□□□ 0.15
NELFE-204ENST00000436289 SMPD4Q9NXE4 827 aa16■□□□□ 0.15
NELFE-204ENST00000436289 TOR4AQ9NXH8 423 aa16■□□□□ 0.15
NELFE-204ENST00000436289 ITGA11Q9UKX5 1188 aa16■□□□□ 0.15
NELFE-204ENST00000436289 SNX9Q9Y5X1 595 aa16■□□□□ 0.15
NELFE-204ENST00000436289 TNFSF14O43557 240 aa15.99■□□□□ 0.15
NELFE-204ENST00000436289 CILPO75339 1184 aa15.99■□□□□ 0.15
NELFE-204ENST00000436289 C1QL1O75973 258 aa15.99■□□□□ 0.15
NELFE-204ENST00000436289 ABL1P00519 1130 aa15.99■□□□□ 0.15
NELFE-204ENST00000436289 PRB1P04280 392 aa15.99■□□□□ 0.15
NELFE-204ENST00000436289 ATXN1LP0C7T5 689 aaKnown RBP15.99■□□□□ 0.15
NELFE-204ENST00000436289 MBL2P11226 248 aaPredicted RBP15.99■□□□□ 0.15
NELFE-204ENST00000436289 CDK4P11802 303 aa15.99■□□□□ 0.15
NELFE-204ENST00000436289 HLA-EP13747 358 aa15.99■□□□□ 0.15
NELFE-204ENST00000436289 OXTRP30559 389 aa15.99■□□□□ 0.15
NELFE-204ENST00000436289 TFAMQ00059 246 aaKnown RBP15.99■□□□□ 0.15
NELFE-204ENST00000436289 MYO1EQ12965 1108 aa15.99■□□□□ 0.15
NELFE-204ENST00000436289 CSGALNACT2Q8N6G5 542 aa15.99■□□□□ 0.15
NELFE-204ENST00000436289 PDZD8Q8NEN9 1154 aa15.99■□□□□ 0.15
NELFE-204ENST00000436289 MRGPRX1Q96LB2 322 aa15.99■□□□□ 0.15
NELFE-204ENST00000436289 REEP2Q9BRK0 252 aa15.99■□□□□ 0.15
NELFE-204ENST00000436289 CD248Q9HCU0 757 aa15.99■□□□□ 0.15
NELFE-204ENST00000436289 SPHK2Q9NRA0 654 aa15.99■□□□□ 0.15
NELFE-204ENST00000436289 CFAP46Q8IYW2 2715 aa15.98■□□□□ 0.15
NELFE-204ENST00000436289 HELZP42694 1942 aaKnown RBP15.98■□□□□ 0.15
NELFE-204ENST00000436289 NPHP3-ACAD11A0A0J9YXS1 232 aa15.98■□□□□ 0.15
NELFE-204ENST00000436289 MEI4A8MW99 385 aa15.98■□□□□ 0.15
NELFE-204ENST00000436289 ANKRD63C9JTQ0 380 aa15.98■□□□□ 0.15
NELFE-204ENST00000436289 BCAT2O15382 392 aaPredicted RBP15.98■□□□□ 0.15
NELFE-204ENST00000436289 RRP8O43159 456 aaKnown RBP15.98■□□□□ 0.15
NELFE-204ENST00000436289 LDHAP00338 332 aaKnown RBP15.98■□□□□ 0.15
NELFE-204ENST00000436289 ITGB3P05106 788 aa15.98■□□□□ 0.15
NELFE-204ENST00000436289 BDNFP23560 247 aa15.98■□□□□ 0.15
NELFE-204ENST00000436289 MAOBP27338 520 aa15.98■□□□□ 0.15
NELFE-204ENST00000436289 TOB1P50616 345 aaPredicted RBP15.98■□□□□ 0.15
NELFE-204ENST00000436289 HMGN5P82970 282 aaKnown RBP15.98■□□□□ 0.15
NELFE-204ENST00000436289 E2F5Q15329 346 aa15.98■□□□□ 0.15
NELFE-204ENST00000436289 HLA-BQ31612 363 aa15.98■□□□□ 0.15
NELFE-204ENST00000436289 CRELD2Q6UXH1 353 aaPredicted RBP15.98■□□□□ 0.15
NELFE-204ENST00000436289 TMPRSS12Q86WS5 348 aa15.98■□□□□ 0.15
NELFE-204ENST00000436289 NAT16Q8N8M0 369 aa15.98■□□□□ 0.15
NELFE-204ENST00000436289 SCFD1Q8WVM8 642 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms