RNA–Protein interactions for RNA: ENST00000435928.1

CALD1-208, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-208ENST00000435928 SMYD3Q9H7B4 428 aa16.69■□□□□ 0.26
CALD1-208ENST00000435928 SLC39A2Q9NP94 309 aa16.69■□□□□ 0.26
CALD1-208ENST00000435928 TBC1D14Q9P2M4 693 aa16.69■□□□□ 0.26
CALD1-208ENST00000435928 ZFHX4Q86UP3 3567 aa16.68■□□□□ 0.26
CALD1-208ENST00000435928 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.68■□□□□ 0.26
CALD1-208ENST00000435928 LNP1A1A4G5 178 aa16.68■□□□□ 0.26
CALD1-208ENST00000435928 ANTXRLA6NF34 631 aa16.68■□□□□ 0.26
CALD1-208ENST00000435928 KAT7O95251 611 aa16.68■□□□□ 0.26
CALD1-208ENST00000435928 KCNK5O95279 499 aa16.68■□□□□ 0.26
CALD1-208ENST00000435928 KLF8O95600 359 aaPredicted RBP16.68■□□□□ 0.26
CALD1-208ENST00000435928 BCKDHBP21953 392 aa16.68■□□□□ 0.26
CALD1-208ENST00000435928 CASP4P49662 377 aa16.68■□□□□ 0.26
CALD1-208ENST00000435928 KDSRQ06136 332 aa16.68■□□□□ 0.26
CALD1-208ENST00000435928 KNOP1Q1ED39 458 aaKnown RBP16.68■□□□□ 0.26
CALD1-208ENST00000435928 FOXD4L5Q5VV16 416 aaPredicted RBP16.68■□□□□ 0.26
CALD1-208ENST00000435928 PSAPL1Q6NUJ1 521 aa16.68■□□□□ 0.26
CALD1-208ENST00000435928 SCARA5Q6ZMJ2 495 aa16.68■□□□□ 0.26
CALD1-208ENST00000435928 FAM35AQ86V20 835 aa16.68■□□□□ 0.26
CALD1-208ENST00000435928 C12orf40Q86WS4 652 aa16.68■□□□□ 0.26
CALD1-208ENST00000435928 SFTPA1Q8IWL2 248 aa16.68■□□□□ 0.26
CALD1-208ENST00000435928 TXNDC5Q8NBS9 432 aaKnown RBP16.68■□□□□ 0.26
CALD1-208ENST00000435928 FOXD4L4Q8WXT5 416 aaPredicted RBP16.68■□□□□ 0.26
CALD1-208ENST00000435928 MED10Q9BTT4 135 aa16.68■□□□□ 0.26
CALD1-208ENST00000435928 ARHGEF4Q9NR80 690 aa16.68■□□□□ 0.26
CALD1-208ENST00000435928 FAM13BQ9NYF5 915 aa16.68■□□□□ 0.26
CALD1-208ENST00000435928 MYO18AQ92614 2054 aaKnown RBP16.68■□□□□ 0.26
CALD1-208ENST00000435928 CEP192Q8TEP8 1941 aa16.67■□□□□ 0.26
CALD1-208ENST00000435928 PVALEFA0A1B0GWK0 134 aa16.67■□□□□ 0.26
CALD1-208ENST00000435928 E2F8A0AVK6 867 aa16.67■□□□□ 0.26
CALD1-208ENST00000435928 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.67■□□□□ 0.26
CALD1-208ENST00000435928 KHNYNO15037 678 aaKnown RBP16.67■□□□□ 0.26
CALD1-208ENST00000435928 COCHO43405 550 aa16.67■□□□□ 0.26
CALD1-208ENST00000435928 TIE1P35590 1138 aa16.67■□□□□ 0.26
CALD1-208ENST00000435928 SLC6A11P48066 632 aa16.67■□□□□ 0.26
CALD1-208ENST00000435928 SLC5A3P53794 718 aa16.67■□□□□ 0.26
CALD1-208ENST00000435928 SHC2P98077 582 aa16.67■□□□□ 0.26
CALD1-208ENST00000435928 MESP2Q0VG99 397 aa16.67■□□□□ 0.26
CALD1-208ENST00000435928 HSF5Q4G112 596 aaPredicted RBP16.67■□□□□ 0.26
CALD1-208ENST00000435928 ZNF667Q5HYK9 610 aa16.67■□□□□ 0.26
CALD1-208ENST00000435928 DAB2IPQ5VWQ8 1189 aa16.67■□□□□ 0.26
CALD1-208ENST00000435928 RHBDF2Q6PJF5 856 aa16.67■□□□□ 0.26
CALD1-208ENST00000435928 TMEM92Q6UXU6 159 aa16.67■□□□□ 0.26
CALD1-208ENST00000435928 IL17RCQ8NAC3 791 aa16.67■□□□□ 0.26
CALD1-208ENST00000435928 GOLGA5Q8TBA6 731 aa16.67■□□□□ 0.26
CALD1-208ENST00000435928 SMARCD1Q96GM5 515 aa16.67■□□□□ 0.26
CALD1-208ENST00000435928 TNIP3Q96KP6 325 aa16.67■□□□□ 0.26
CALD1-208ENST00000435928 SPACA7Q96KW9 195 aa16.67■□□□□ 0.26
CALD1-208ENST00000435928 KCNK16Q96T55 309 aa16.67■□□□□ 0.26
CALD1-208ENST00000435928 VRTNQ9H8Y1 702 aa16.67■□□□□ 0.26
CALD1-208ENST00000435928 POLMQ9NP87 494 aaPredicted RBP16.67■□□□□ 0.26
CALD1-208ENST00000435928 DMAP1Q9NPF5 467 aaPredicted RBP16.67■□□□□ 0.26
CALD1-208ENST00000435928 KRT82Q9NSB4 513 aa16.67■□□□□ 0.26
CALD1-208ENST00000435928 BCCIPQ9P287 314 aaKnown RBP eCLIP16.67■□□□□ 0.26
CALD1-208ENST00000435928 CIZ1Q9ULV3 898 aaPredicted RBP16.67■□□□□ 0.26
CALD1-208ENST00000435928 C4orf47A7E2U8 309 aa16.66■□□□□ 0.26
CALD1-208ENST00000435928 SGK1O00141 431 aa16.66■□□□□ 0.26
CALD1-208ENST00000435928 HNRNPLP14866 589 aaKnown RBP eCLIP16.66■□□□□ 0.26
CALD1-208ENST00000435928 GRIA2P42262 883 aa16.66■□□□□ 0.26
CALD1-208ENST00000435928 AFMP43652 599 aa16.66■□□□□ 0.26
CALD1-208ENST00000435928 ME1P48163 572 aa16.66■□□□□ 0.26
CALD1-208ENST00000435928 DHPSP49366 369 aaPredicted RBP16.66■□□□□ 0.26
CALD1-208ENST00000435928 TUBP50607 506 aa16.66■□□□□ 0.26
CALD1-208ENST00000435928 NOVA1P51513 510 aaKnown RBP16.66■□□□□ 0.26
CALD1-208ENST00000435928 AP3M2P53677 418 aa16.66■□□□□ 0.26
CALD1-208ENST00000435928 CDH8P55286 799 aa16.66■□□□□ 0.26
CALD1-208ENST00000435928 CUL4BQ13620 913 aa16.66■□□□□ 0.26
CALD1-208ENST00000435928 NCOA4Q13772 614 aa16.66■□□□□ 0.26
CALD1-208ENST00000435928 FOXD4L6Q3SYB3 417 aaPredicted RBP16.66■□□□□ 0.26
CALD1-208ENST00000435928 EOGTQ5NDL2 527 aa16.66■□□□□ 0.26
CALD1-208ENST00000435928 LY6G5CQ5SRR4 150 aa16.66■□□□□ 0.26
CALD1-208ENST00000435928 HECTD3Q5T447 861 aa16.66■□□□□ 0.26
CALD1-208ENST00000435928 FOXD4L3Q6VB84 417 aaPredicted RBP16.66■□□□□ 0.26
CALD1-208ENST00000435928 SCAMP5Q8TAC9 235 aa16.66■□□□□ 0.26
CALD1-208ENST00000435928 WHAMMQ8TF30 809 aa16.66■□□□□ 0.26
CALD1-208ENST00000435928 OTUB2Q96DC9 234 aa16.66■□□□□ 0.26
CALD1-208ENST00000435928 ZFRQ96KR1 1074 aaKnown RBP16.66■□□□□ 0.26
CALD1-208ENST00000435928 SH3BP1Q9Y3L3 701 aa16.66■□□□□ 0.26
CALD1-208ENST00000435928 LRRIQ3A6PVS8 624 aaPredicted RBP16.65■□□□□ 0.26
CALD1-208ENST00000435928 TNFRSF4P43489 277 aa16.65■□□□□ 0.26
CALD1-208ENST00000435928 KIR2DL1P43626 348 aaPredicted RBP16.65■□□□□ 0.26
CALD1-208ENST00000435928 GAD2Q05329 585 aa16.65■□□□□ 0.26
CALD1-208ENST00000435928 SNX30Q5VWJ9 437 aa16.65■□□□□ 0.26
CALD1-208ENST00000435928 BTBD8Q5XKL5 378 aa16.65■□□□□ 0.26
CALD1-208ENST00000435928 CEP57L1Q8IYX8 460 aa16.65■□□□□ 0.26
CALD1-208ENST00000435928 OLIG1Q8TAK6 271 aa16.65■□□□□ 0.26
CALD1-208ENST00000435928 PLEKHO2Q8TD55 490 aa16.65■□□□□ 0.26
CALD1-208ENST00000435928 PARD3BQ8TEW8 1205 aa16.65■□□□□ 0.26
CALD1-208ENST00000435928 NACA2Q9H009 215 aa16.65■□□□□ 0.26
CALD1-208ENST00000435928 CCSER2Q9H7U1 834 aa16.65■□□□□ 0.26
CALD1-208ENST00000435928 TMEM9BQ9NQ34 198 aa16.65■□□□□ 0.26
CALD1-208ENST00000435928 GMIPQ9P107 970 aa16.65■□□□□ 0.26
CALD1-208ENST00000435928 CHORDC1Q9UHD1 332 aaPredicted RBP16.65■□□□□ 0.26
CALD1-208ENST00000435928 PI4KAP42356 2102 aa16.64■□□□□ 0.25
CALD1-208ENST00000435928 PATE3B3GLJ2 98 aa16.64■□□□□ 0.25
CALD1-208ENST00000435928 TNFRSF10BO14763 440 aa16.64■□□□□ 0.25
CALD1-208ENST00000435928 AP1G2O75843 785 aa16.64■□□□□ 0.25
CALD1-208ENST00000435928 IRF1P10914 325 aa16.64■□□□□ 0.25
CALD1-208ENST00000435928 CHRM1P11229 460 aaPredicted RBP16.64■□□□□ 0.25
CALD1-208ENST00000435928 P4HA1P13674 534 aa16.64■□□□□ 0.25
CALD1-208ENST00000435928 P2RY2P41231 377 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms