RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 APOPT1Q96IL0 206 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 COX4I2Q96KJ9 171 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 GPATCH1Q9BRR8 931 aaKnown RBP7.75□□□□□ -1.17
CPSF6-202ENST00000435070 CCDC106Q9BWC9 280 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 TOPORSQ9NS56 1045 aaPredicted RBP7.75□□□□□ -1.17
CPSF6-202ENST00000435070 PKD2L1Q9P0L9 805 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 STRIP2Q9ULQ0 834 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 CICQ96RK0 1608 aaPredicted RBP7.75□□□□□ -1.17
CPSF6-202ENST00000435070 TGDSO95455 350 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 HOXA13P31271 388 aaPredicted RBP7.75□□□□□ -1.17
CPSF6-202ENST00000435070 ETV4P43268 484 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 PKNOX1P55347 436 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 OTUD4Q01804 1114 aaKnown RBP7.75□□□□□ -1.17
CPSF6-202ENST00000435070 NFX1Q12986 1120 aaKnown RBP7.75□□□□□ -1.17
CPSF6-202ENST00000435070 C16orf46Q6P387 395 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 SMIM5Q71RC9 77 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 NEDD1Q8NHV4 660 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 DCAKDQ8WVC6 231 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 SEMA4DQ92854 862 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 EIF2AK1Q9BQI3 630 aaKnown RBP7.75□□□□□ -1.17
CPSF6-202ENST00000435070 SEMA6AQ9H2E6 1030 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 MAN1C1Q9NR34 630 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 IQANK1A0A1B0GTG1 560 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 LIASO43766 372 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 IL2RBP14784 551 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 KLF1Q13351 362 aaPredicted RBP7.74□□□□□ -1.17
CPSF6-202ENST00000435070 RHOT1Q8IXI2 618 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 MARVELD2Q8N4S9 558 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 ATP2A3Q93084 1043 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 BTBD9Q96Q07 612 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 EBF1Q9UH73 591 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 DNAJC16Q9Y2G8 782 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 CBFA2T3O75081 653 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 AVILO75366 819 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 PSMC1P62191 440 aaKnown RBP7.74□□□□□ -1.17
CPSF6-202ENST00000435070 PDCD4Q53EL6 469 aaKnown RBP7.74□□□□□ -1.17
CPSF6-202ENST00000435070 ZBTB41Q5SVQ8 909 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 RARS2Q5T160 578 aaKnown RBP7.74□□□□□ -1.17
CPSF6-202ENST00000435070 KYAT3Q6YP21 454 aaKnown RBP7.74□□□□□ -1.17
CPSF6-202ENST00000435070 IGDCC3Q8IVU1 814 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 HSPH1Q92598 858 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 USP13Q92995 863 aaPredicted RBP7.74□□□□□ -1.17
CPSF6-202ENST00000435070 ALKBH8Q96BT7 664 aaKnown RBP7.74□□□□□ -1.17
CPSF6-202ENST00000435070 TRPC7Q9HCX4 862 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 PNMA6FA0A0J9YX94 578 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 K7ENM7 598 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 DCXO43602 365 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 PDAP1Q13442 181 aaKnown RBP7.74□□□□□ -1.17
CPSF6-202ENST00000435070 KLHL38Q2WGJ6 581 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 RNASEH2BQ5TBB1 312 aaKnown RBP7.74□□□□□ -1.17
CPSF6-202ENST00000435070 ADGRG6Q86SQ4 1221 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 PLEKHO2Q8TD55 490 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 POMGNT1Q8WZA1 660 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 OSBPL6Q9BZF3 934 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 ACSS3Q9H6R3 686 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 APOBEC2Q9Y235 224 aaKnown RBP7.74□□□□□ -1.17
CPSF6-202ENST00000435070 MTA2O94776 668 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 CSPG5O95196 566 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 WEE2P0C1S8 567 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 CD1EP15812 388 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 ELK3P41970 407 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 STX3Q13277 289 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 KRT80Q6KB66 452 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 DPP8Q6V1X1 898 aaPredicted RBP7.74□□□□□ -1.17
CPSF6-202ENST00000435070 ZNF720Q7Z2F6 126 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 ERI1Q8IV48 349 aaKnown RBP7.74□□□□□ -1.17
CPSF6-202ENST00000435070 ZSCAN18Q8TBC5 510 aaPredicted RBP7.74□□□□□ -1.17
CPSF6-202ENST00000435070 IRGQQ8WZA9 623 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 VPS51Q9UID3 782 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 SATB2Q9UPW6 733 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 A8MU76 341 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 SEC24DO94855 1032 aaPredicted RBP7.74□□□□□ -1.17
CPSF6-202ENST00000435070 NSFP46459 744 aaKnown RBP7.74□□□□□ -1.17
CPSF6-202ENST00000435070 MORF4L2Q15014 288 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 SF3B3Q15393 1217 aaKnown RBP7.74□□□□□ -1.17
CPSF6-202ENST00000435070 PARP10Q53GL7 1025 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 SPOUT1Q5T280 376 aaKnown RBP7.74□□□□□ -1.17
CPSF6-202ENST00000435070 ATG16L1Q676U5 607 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 THOC7Q6I9Y2 204 aaKnown RBP7.74□□□□□ -1.17
CPSF6-202ENST00000435070 FRMD7Q6ZUT3 714 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 RELL1Q8IUW5 271 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 FAM71AQ8IYT1 594 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 DDI1Q8WTU0 396 aa7.74□□□□□ -1.17
CPSF6-202ENST00000435070 H3BNX3 289 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 MATN2O00339 956 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 GFAPP14136 432 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 RCVRNP35243 200 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 GDF10P55107 478 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 BMT2Q1RMZ1 405 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 TXNRD3NBQ6F5E7 133 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 ELMSAN1Q6PJG2 1045 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 RTKN2Q8IZC4 609 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 PDIK1LQ8N165 341 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 DDHD1Q8NEL9 900 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 GFM2Q969S9 779 aaKnown RBP7.73□□□□□ -1.17
CPSF6-202ENST00000435070 GIMAP4Q9NUV9 329 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 TBCCD1Q9NVR7 557 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 RAB20Q9NX57 234 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 CDC14AQ9UNH5 594 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 AFG3L2Q9Y4W6 797 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms