RNA–Protein interactions for RNA: ENST00000434192.2

GTF2A1-202, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2A1, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-202ENST00000434192 SLC24A5Q71RS6 500 aa7.38□□□□□ -1.23
GTF2A1-202ENST00000434192 ARMCX6Q7L4S7 300 aa7.38□□□□□ -1.23
GTF2A1-202ENST00000434192 FAM214BQ7L5A3 538 aa7.38□□□□□ -1.23
GTF2A1-202ENST00000434192 TRAPPC11Q7Z392 1133 aa7.38□□□□□ -1.23
GTF2A1-202ENST00000434192 ECHDC2Q86YB7 292 aa7.38□□□□□ -1.23
GTF2A1-202ENST00000434192 NPAS4Q8IUM7 802 aa7.38□□□□□ -1.23
GTF2A1-202ENST00000434192 FMNL3Q8IVF7 1028 aa7.38□□□□□ -1.23
GTF2A1-202ENST00000434192 TMEM199Q8N511 208 aa7.38□□□□□ -1.23
GTF2A1-202ENST00000434192 KCT2Q8NC54 265 aa7.38□□□□□ -1.23
GTF2A1-202ENST00000434192 RNF169Q8NCN4 708 aa7.38□□□□□ -1.23
GTF2A1-202ENST00000434192 ZNF397Q8NF99 534 aaPredicted RBP7.38□□□□□ -1.23
GTF2A1-202ENST00000434192 DBF4BQ8NFT6 615 aa7.38□□□□□ -1.23
GTF2A1-202ENST00000434192 BEST2Q8NFU1 509 aa7.38□□□□□ -1.23
GTF2A1-202ENST00000434192 OR5B17Q8NGF7 314 aa7.38□□□□□ -1.23
GTF2A1-202ENST00000434192 TAS1R2Q8TE23 839 aa7.38□□□□□ -1.23
GTF2A1-202ENST00000434192 LINC01599Q8WXQ3 324 aa7.38□□□□□ -1.23
GTF2A1-202ENST00000434192 FAM81BQ96LP2 452 aa7.38□□□□□ -1.23
GTF2A1-202ENST00000434192 FAM161BQ96MY7 647 aa7.38□□□□□ -1.23
GTF2A1-202ENST00000434192 NT5C1BQ96P26 610 aa7.38□□□□□ -1.23
GTF2A1-202ENST00000434192 SPAG5Q96R06 1193 aa7.38□□□□□ -1.23
GTF2A1-202ENST00000434192 EDEM3Q9BZQ6 932 aa7.38□□□□□ -1.23
GTF2A1-202ENST00000434192 GANQ9H2C0 597 aa7.38□□□□□ -1.23
GTF2A1-202ENST00000434192 FBRSQ9HAH7 460 aa7.38□□□□□ -1.23
GTF2A1-202ENST00000434192 ABHD10Q9NUJ1 306 aa7.38□□□□□ -1.23
GTF2A1-202ENST00000434192 RAB20Q9NX57 234 aa7.38□□□□□ -1.23
GTF2A1-202ENST00000434192 FBXL5Q9UKA1 691 aa7.38□□□□□ -1.23
GTF2A1-202ENST00000434192 UBQLN1Q9UMX0 589 aaKnown RBP7.38□□□□□ -1.23
GTF2A1-202ENST00000434192 GIT1Q9Y2X7 761 aa7.38□□□□□ -1.23
GTF2A1-202ENST00000434192 PLXNA4Q9HCM2 1894 aa7.38□□□□□ -1.23
GTF2A1-202ENST00000434192 LAMA2P24043 3122 aaKnown RBP7.38□□□□□ -1.23
GTF2A1-202ENST00000434192 COL4A6Q14031 1691 aa7.38□□□□□ -1.23
GTF2A1-202ENST00000434192 C9IYK1 514 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 EPHB6O15197 1021 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 MEFVO15553 781 aaPredicted RBP7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 ZNF623O75123 536 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 VNN1O95497 513 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 EOMESO95936 686 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 KRT19P08727 400 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 ACTN1P12814 892 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 UCHL3P15374 230 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 KCNE1P15382 129 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 ATF7P17544 494 aaPredicted RBP7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 POLR2BP30876 1174 aaKnown RBP7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 EPHB4P54760 987 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 POLR2FP61218 127 aaKnown RBP7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 ETF1P62495 437 aaKnown RBP7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 NOP14P78316 857 aaKnown RBP7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 ZBED6P86452 979 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 GRIK3Q13003 919 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 PPIGQ13427 754 aaKnown RBP eCLIP7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 RAPGEF1Q13905 1077 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 SHHQ15465 462 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 ZNF699Q32M78 642 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 XKR4Q5GH76 650 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 KLHDC7AQ5VTJ3 777 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 PSRC1Q6PGN9 363 aaPredicted RBP7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 GLB1LQ6UWU2 654 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 DNAJC14Q6Y2X3 702 aaPredicted RBP7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 CCDC186Q7Z3E2 898 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 DEFB128Q7Z7B8 93 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 MRPL10Q7Z7H8 261 aaKnown RBP7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 PPM1KQ8N3J5 372 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 CCDC112Q8NEF3 446 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 URGCPQ8TCY9 931 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 RSPH1Q8WYR4 309 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 TAF4BQ92750 862 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 LPPQ93052 612 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 FAM84AQ96KN4 292 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 HRASLS5Q96KN8 279 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 ZNF560Q96MR9 790 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 SIX2Q9NPC8 291 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 NLRC4Q9NPP4 1024 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 SLC38A7Q9NVC3 462 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 TMEM161AQ9NX61 479 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 TUBGCP4Q9UGJ1 667 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 MYO6Q9UM54 1294 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 CAPN11Q9UMQ6 739 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 LUC7L2Q9Y383 392 aaKnown RBP7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 FHOD1Q9Y613 1164 aa7.37□□□□□ -1.23
GTF2A1-202ENST00000434192 TMEM265A0A087WTH1 108 aa7.36□□□□□ -1.23
GTF2A1-202ENST00000434192 SMIM28A0A1B0GU29 152 aa7.36□□□□□ -1.23
GTF2A1-202ENST00000434192 ARL5CA6NH57 179 aa7.36□□□□□ -1.23
GTF2A1-202ENST00000434192 LRRC53A6NM62 1247 aa7.36□□□□□ -1.23
GTF2A1-202ENST00000434192 MEIS3P2A8K0S8 358 aa7.36□□□□□ -1.23
GTF2A1-202ENST00000434192 F8VZ95 297 aa7.36□□□□□ -1.23
GTF2A1-202ENST00000434192 PTGESO14684 152 aa7.36□□□□□ -1.23
GTF2A1-202ENST00000434192 EFCAB14O75071 495 aa7.36□□□□□ -1.23
GTF2A1-202ENST00000434192 BAIAP3O94812 1187 aa7.36□□□□□ -1.23
GTF2A1-202ENST00000434192 NOL4O94818 638 aa7.36□□□□□ -1.23
GTF2A1-202ENST00000434192 ASS1P00966 412 aaKnown RBP7.36□□□□□ -1.23
GTF2A1-202ENST00000434192 THP07101 528 aa7.36□□□□□ -1.23
GTF2A1-202ENST00000434192 P4HA1P13674 534 aa7.36□□□□□ -1.23
GTF2A1-202ENST00000434192 CYP3A5P20815 502 aa7.36□□□□□ -1.23
GTF2A1-202ENST00000434192 TBXAS1P24557 533 aaPredicted RBP7.36□□□□□ -1.23
GTF2A1-202ENST00000434192 ATICP31939 592 aa7.36□□□□□ -1.23
GTF2A1-202ENST00000434192 KRT9P35527 623 aa7.36□□□□□ -1.23
GTF2A1-202ENST00000434192 PNPLA4P41247 253 aa7.36□□□□□ -1.23
GTF2A1-202ENST00000434192 SCNN1GP51170 649 aa7.36□□□□□ -1.23
GTF2A1-202ENST00000434192 MFAP3P55082 362 aa7.36□□□□□ -1.23
GTF2A1-202ENST00000434192 ADKP55263 362 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms