RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 ZMYM2Q9UBW7 1377 aa4.68□□□□□ -1.66
PTPN4-205ENST00000433888 IGKV2D-30A0A075B6S6 120 aa4.68□□□□□ -1.66
PTPN4-205ENST00000433888 CCDC187A0A096LP49 1063 aa4.68□□□□□ -1.66
PTPN4-205ENST00000433888 FAM90A10PA6NDY2 464 aa4.68□□□□□ -1.66
PTPN4-205ENST00000433888 SPRY2O43597 315 aa4.68□□□□□ -1.66
PTPN4-205ENST00000433888 DIO1P49895 249 aa4.68□□□□□ -1.66
PTPN4-205ENST00000433888 PRKAG1P54619 331 aa4.68□□□□□ -1.66
PTPN4-205ENST00000433888 CFHR1Q03591 330 aa4.68□□□□□ -1.66
PTPN4-205ENST00000433888 LARS2Q15031 903 aaKnown RBP4.68□□□□□ -1.66
PTPN4-205ENST00000433888 MLC1Q15049 377 aa4.68□□□□□ -1.66
PTPN4-205ENST00000433888 MIDNQ504T8 468 aa4.68□□□□□ -1.66
PTPN4-205ENST00000433888 TMTC4Q5T4D3 741 aa4.68□□□□□ -1.66
PTPN4-205ENST00000433888 B3GNT9Q6UX72 402 aa4.68□□□□□ -1.66
PTPN4-205ENST00000433888 ZDHHC24Q6UX98 284 aa4.68□□□□□ -1.66
PTPN4-205ENST00000433888 ZNF783Q6ZMS7 281 aa4.68□□□□□ -1.66
PTPN4-205ENST00000433888 COL23A1Q86Y22 540 aaPredicted RBP4.68□□□□□ -1.66
PTPN4-205ENST00000433888 OR6B3Q8NGW1 331 aa4.68□□□□□ -1.66
PTPN4-205ENST00000433888 ADAMTS15Q8TE58 950 aa4.68□□□□□ -1.66
PTPN4-205ENST00000433888 RAPGEF4Q8WZA2 1011 aa4.68□□□□□ -1.66
PTPN4-205ENST00000433888 MAML1Q92585 1016 aa4.68□□□□□ -1.66
PTPN4-205ENST00000433888 CUL5Q93034 780 aa4.68□□□□□ -1.66
PTPN4-205ENST00000433888 HOOK2Q96ED9 719 aa4.68□□□□□ -1.66
PTPN4-205ENST00000433888 KAZALD1Q96I82 304 aa4.68□□□□□ -1.66
PTPN4-205ENST00000433888 ZMAT3Q9HA38 289 aaKnown RBP4.68□□□□□ -1.66
PTPN4-205ENST00000433888 TMEM184CQ9NVA4 438 aa4.68□□□□□ -1.66
PTPN4-205ENST00000433888 TRIP12Q14669 1992 aaPredicted RBP4.67□□□□□ -1.66
PTPN4-205ENST00000433888 TCF20Q9UGU0 1960 aaKnown RBP4.67□□□□□ -1.66
PTPN4-205ENST00000433888 CD8B2A6NJW9 211 aa4.67□□□□□ -1.66
PTPN4-205ENST00000433888 PSMD9O00233 223 aa4.67□□□□□ -1.66
PTPN4-205ENST00000433888 AP1G1O43747 822 aa4.67□□□□□ -1.66
PTPN4-205ENST00000433888 PHKG2P15735 406 aa4.67□□□□□ -1.66
PTPN4-205ENST00000433888 THBS3P49746 956 aa4.67□□□□□ -1.66
PTPN4-205ENST00000433888 AGFG1P52594 562 aaKnown RBP4.67□□□□□ -1.66
PTPN4-205ENST00000433888 COPB1P53618 953 aaKnown RBP4.67□□□□□ -1.66
PTPN4-205ENST00000433888 TIRAPP58753 221 aa4.67□□□□□ -1.66
PTPN4-205ENST00000433888 NANOS2P60321 138 aaKnown RBP4.67□□□□□ -1.66
PTPN4-205ENST00000433888 SUMO2P61956 95 aaKnown RBP4.67□□□□□ -1.66
PTPN4-205ENST00000433888 IFIT1BQ5T764 474 aaKnown RBP4.67□□□□□ -1.66
PTPN4-205ENST00000433888 RAB11FIP4Q86YS3 637 aa4.67□□□□□ -1.66
PTPN4-205ENST00000433888 DENND1CQ8IV53 801 aa4.67□□□□□ -1.66
PTPN4-205ENST00000433888 FOXP1Q9H334 677 aaPredicted RBP4.67□□□□□ -1.66
PTPN4-205ENST00000433888 ATP6V0A4Q9HBG4 840 aa4.67□□□□□ -1.66
PTPN4-205ENST00000433888 DNMT3BQ9UBC3 853 aaKnown RBP4.67□□□□□ -1.66
PTPN4-205ENST00000433888 HEY2Q9UBP5 337 aa4.67□□□□□ -1.66
PTPN4-205ENST00000433888 OAZ2O95190 189 aa4.66□□□□□ -1.66
PTPN4-205ENST00000433888 ALPLP05186 524 aa4.66□□□□□ -1.66
PTPN4-205ENST00000433888 KITP10721 976 aa4.66□□□□□ -1.66
PTPN4-205ENST00000433888 UQCRC1P31930 480 aa4.66□□□□□ -1.66
PTPN4-205ENST00000433888 TIAL1Q01085 375 aaKnown RBP eCLIP4.66□□□□□ -1.66
PTPN4-205ENST00000433888 ZNF91Q05481 1191 aa4.66□□□□□ -1.66
PTPN4-205ENST00000433888 SLC13A2Q13183 592 aa4.66□□□□□ -1.66
PTPN4-205ENST00000433888 DCAF12L1Q5VU92 463 aa4.66□□□□□ -1.66
PTPN4-205ENST00000433888 RANBP10Q6VN20 620 aa4.66□□□□□ -1.66
PTPN4-205ENST00000433888 SPARTQ8N0X7 666 aa4.66□□□□□ -1.66
PTPN4-205ENST00000433888 PPP1R35Q8TAP8 253 aa4.66□□□□□ -1.66
PTPN4-205ENST00000433888 SLC35G2Q8TBE7 412 aa4.66□□□□□ -1.66
PTPN4-205ENST00000433888 DNAJB14Q8TBM8 379 aa4.66□□□□□ -1.66
PTPN4-205ENST00000433888 WIPF2Q8TF74 440 aaPredicted RBP4.66□□□□□ -1.66
PTPN4-205ENST00000433888 VN1R3Q9BXE9 311 aa4.66□□□□□ -1.66
PTPN4-205ENST00000433888 RHOBTB2Q9BYZ6 727 aa4.66□□□□□ -1.66
PTPN4-205ENST00000433888 AASDHPPTQ9NRN7 309 aa4.66□□□□□ -1.66
PTPN4-205ENST00000433888 PI4KBQ9UBF8 816 aa4.66□□□□□ -1.66
PTPN4-205ENST00000433888 CDY1Q9Y6F8 540 aa4.66□□□□□ -1.66
PTPN4-205ENST00000433888 TOMM40O96008 361 aa4.65□□□□□ -1.67
PTPN4-205ENST00000433888 CTSAP10619 480 aa4.65□□□□□ -1.67
PTPN4-205ENST00000433888 EN2P19622 333 aaPredicted RBP4.65□□□□□ -1.67
PTPN4-205ENST00000433888 TMEM63BQ5T3F8 832 aa4.65□□□□□ -1.67
PTPN4-205ENST00000433888 TMEM65Q6PI78 240 aa4.65□□□□□ -1.67
PTPN4-205ENST00000433888 C9orf47Q6ZRZ4 202 aa4.65□□□□□ -1.67
PTPN4-205ENST00000433888 UBE2Q1Q7Z7E8 422 aa4.65□□□□□ -1.67
PTPN4-205ENST00000433888 DAAM2Q86T65 1068 aa4.65□□□□□ -1.67
PTPN4-205ENST00000433888 MICU3Q86XE3 530 aa4.65□□□□□ -1.67
PTPN4-205ENST00000433888 ZNF548Q8NEK5 533 aaPredicted RBP4.65□□□□□ -1.67
PTPN4-205ENST00000433888 MAFAQ8NHW3 353 aaPredicted RBP4.65□□□□□ -1.67
PTPN4-205ENST00000433888 IL31RAQ8NI17 732 aa4.65□□□□□ -1.67
PTPN4-205ENST00000433888 WDYHV1Q96HA8 205 aa4.65□□□□□ -1.67
PTPN4-205ENST00000433888 AIFM3Q96NN9 605 aa4.65□□□□□ -1.67
PTPN4-205ENST00000433888 CAMK1GQ96NX5 476 aa4.65□□□□□ -1.67
PTPN4-205ENST00000433888 ACO2Q99798 780 aaKnown RBP4.65□□□□□ -1.67
PTPN4-205ENST00000433888 ZSCAN32Q9NX65 697 aa4.65□□□□□ -1.67
PTPN4-205ENST00000433888 MGAT4CQ9UBM8 478 aa4.65□□□□□ -1.67
PTPN4-205ENST00000433888 PNMA8BQ9ULN7 279 aaPredicted RBP4.65□□□□□ -1.67
PTPN4-205ENST00000433888 USP22Q9UPT9 525 aa4.65□□□□□ -1.67
PTPN4-205ENST00000433888 CNTNAP2Q9UHC6 1331 aa4.65□□□□□ -1.67
PTPN4-205ENST00000433888 A0A1W2PPL8 197 aa4.64□□□□□ -1.67
PTPN4-205ENST00000433888 CD3EAPO15446 510 aaKnown RBP4.64□□□□□ -1.67
PTPN4-205ENST00000433888 TBC1D4O60343 1298 aa4.64□□□□□ -1.67
PTPN4-205ENST00000433888 IGSF3O75054 1194 aa4.64□□□□□ -1.67
PTPN4-205ENST00000433888 EPHA3P29320 983 aa4.64□□□□□ -1.67
PTPN4-205ENST00000433888 PRKAR1BP31321 381 aa4.64□□□□□ -1.67
PTPN4-205ENST00000433888 MCM5P33992 734 aa4.64□□□□□ -1.67
PTPN4-205ENST00000433888 ID2Q02363 134 aa4.64□□□□□ -1.67
PTPN4-205ENST00000433888 CFHR3Q02985 330 aa4.64□□□□□ -1.67
PTPN4-205ENST00000433888 RAB32Q13637 225 aa4.64□□□□□ -1.67
PTPN4-205ENST00000433888 DCDC5Q6ZRR9 648 aa4.64□□□□□ -1.67
PTPN4-205ENST00000433888 KCTD20Q7Z5Y7 419 aa4.64□□□□□ -1.67
PTPN4-205ENST00000433888 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.64□□□□□ -1.672e-6■■■□□ 16
PTPN4-205ENST00000433888 CHPFQ8IZ52 775 aa4.64□□□□□ -1.67
PTPN4-205ENST00000433888 MPP5Q8N3R9 675 aa4.64□□□□□ -1.67
PTPN4-205ENST00000433888 OR56A3Q8NH54 315 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms