RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 ARL14EPQ8N8R7 260 aaPredicted RBP16.35■□□□□ 0.21
TREX1-201ENST00000433541 OVCA2Q8WZ82 227 aa16.35■□□□□ 0.21
TREX1-201ENST00000433541 E2F7Q96AV8 911 aa16.35■□□□□ 0.21
TREX1-201ENST00000433541 ELSPBP1Q96BH3 223 aa16.35■□□□□ 0.21
TREX1-201ENST00000433541 NAP1L5Q96NT1 182 aaPredicted RBP16.35■□□□□ 0.21
TREX1-201ENST00000433541 IFNKQ9P0W0 207 aa16.35■□□□□ 0.21
TREX1-201ENST00000433541 NAGPAQ9UK23 515 aa16.35■□□□□ 0.21
TREX1-201ENST00000433541 ZNF840PA6NDX5 716 aa16.34■□□□□ 0.21
TREX1-201ENST00000433541 HEPACAM2A8MVW5 462 aa16.34■□□□□ 0.21
TREX1-201ENST00000433541 HHLA1C9JL84 531 aa16.34■□□□□ 0.21
TREX1-201ENST00000433541 ANHXE9PGG2 379 aa16.34■□□□□ 0.21
TREX1-201ENST00000433541 TULP2O00295 520 aa16.34■□□□□ 0.21
TREX1-201ENST00000433541 EPHB6O15197 1021 aa16.34■□□□□ 0.21
TREX1-201ENST00000433541 ECI2O75521 394 aa16.34■□□□□ 0.21
TREX1-201ENST00000433541 PRAMEF12O95522 483 aa16.34■□□□□ 0.21
TREX1-201ENST00000433541 MBL2P11226 248 aaPredicted RBP16.34■□□□□ 0.21
TREX1-201ENST00000433541 PLA2G4AP47712 749 aa16.34■□□□□ 0.21
TREX1-201ENST00000433541 KIF11P52732 1056 aa16.34■□□□□ 0.21
TREX1-201ENST00000433541 HECTD3Q5T447 861 aa16.34■□□□□ 0.21
TREX1-201ENST00000433541 TAF3Q5VWG9 929 aa16.34■□□□□ 0.21
TREX1-201ENST00000433541 DENND1BQ6P3S1 775 aa16.34■□□□□ 0.21
TREX1-201ENST00000433541 FAM71AQ8IYT1 594 aa16.34■□□□□ 0.21
TREX1-201ENST00000433541 SLC44A3Q8N4M1 653 aa16.34■□□□□ 0.21
TREX1-201ENST00000433541 GOLGA1Q92805 767 aa16.34■□□□□ 0.21
TREX1-201ENST00000433541 CYP2S1Q96SQ9 504 aa16.34■□□□□ 0.21
TREX1-201ENST00000433541 ZSWIM1Q9BR11 485 aa16.34■□□□□ 0.21
TREX1-201ENST00000433541 RPP25Q9BUL9 199 aaKnown RBP16.34■□□□□ 0.21
TREX1-201ENST00000433541 NAA15Q9BXJ9 866 aaKnown RBP16.34■□□□□ 0.21
TREX1-201ENST00000433541 UBXN6Q9BZV1 441 aa16.34■□□□□ 0.21
TREX1-201ENST00000433541 SYNCQ9H7C4 482 aa16.34■□□□□ 0.21
TREX1-201ENST00000433541 TDP1Q9NUW8 608 aa16.34■□□□□ 0.21
TREX1-201ENST00000433541 SCML2Q9UQR0 700 aa16.34■□□□□ 0.21
TREX1-201ENST00000433541 TICRRQ7Z2Z1 1910 aa16.33■□□□□ 0.21
TREX1-201ENST00000433541 A0A1W2PQH9 124 aa16.33■□□□□ 0.2
TREX1-201ENST00000433541 CBFA2T2O43439 604 aa16.33■□□□□ 0.2
TREX1-201ENST00000433541 NARSO43776 548 aaKnown RBP16.33■□□□□ 0.2
TREX1-201ENST00000433541 ZBED1O96006 694 aa16.33■□□□□ 0.2
TREX1-201ENST00000433541 CFHP08603 1231 aa16.33■□□□□ 0.2
TREX1-201ENST00000433541 RALAP11233 206 aa16.33■□□□□ 0.2
TREX1-201ENST00000433541 CLCN1P35523 988 aa16.33■□□□□ 0.2
TREX1-201ENST00000433541 SOX5P35711 763 aa16.33■□□□□ 0.2
TREX1-201ENST00000433541 DPY19L2P1Q6NXN4 242 aa16.33■□□□□ 0.2
TREX1-201ENST00000433541 CC2D1AQ6P1N0 951 aaPredicted RBP16.33■□□□□ 0.2
TREX1-201ENST00000433541 RSRC2Q7L4I2 434 aaKnown RBP16.33■□□□□ 0.2
TREX1-201ENST00000433541 UBALD2Q8IYN6 164 aa16.33■□□□□ 0.2
TREX1-201ENST00000433541 ARHGAP18Q8N392 663 aa16.33■□□□□ 0.2
TREX1-201ENST00000433541 CELF5Q8N6W0 485 aaKnown RBP16.33■□□□□ 0.2
TREX1-201ENST00000433541 DEPDC1BQ8WUY9 529 aa16.33■□□□□ 0.2
TREX1-201ENST00000433541 KHSRPQ92945 711 aaKnown RBP eCLIP16.33■□□□□ 0.2
TREX1-201ENST00000433541 NOX5Q96PH1 765 aa16.33■□□□□ 0.2
TREX1-201ENST00000433541 TRMT61BQ9BVS5 477 aaKnown RBP16.33■□□□□ 0.2
TREX1-201ENST00000433541 ULBP1Q9BZM6 244 aa16.33■□□□□ 0.2
TREX1-201ENST00000433541 MIS12Q9H081 205 aa16.33■□□□□ 0.2
TREX1-201ENST00000433541 SMOC2Q9H3U7 446 aa16.33■□□□□ 0.2
TREX1-201ENST00000433541 BRD9Q9H8M2 597 aa16.33■□□□□ 0.2
TREX1-201ENST00000433541 KIF9Q9HAQ2 790 aa16.33■□□□□ 0.2
TREX1-201ENST00000433541 SEPT11Q9NVA2 429 aaKnown RBP16.33■□□□□ 0.2
TREX1-201ENST00000433541 THG1LQ9NWX6 298 aaKnown RBP16.33■□□□□ 0.2
TREX1-201ENST00000433541 SMPD4Q9NXE4 827 aa16.33■□□□□ 0.2
TREX1-201ENST00000433541 KIF26AQ9ULI4 1882 aaPredicted RBP16.33■□□□□ 0.2
TREX1-201ENST00000433541 A0A1W2PQC6 194 aa16.32■□□□□ 0.2
TREX1-201ENST00000433541 FAM170AA1A519 330 aa16.32■□□□□ 0.2
TREX1-201ENST00000433541 SOBPA7XYQ1 873 aa16.32■□□□□ 0.2
TREX1-201ENST00000433541 ZNF263O14978 683 aa16.32■□□□□ 0.2
TREX1-201ENST00000433541 SRFP11831 508 aa16.32■□□□□ 0.2
TREX1-201ENST00000433541 CYP11B1P15538 503 aa16.32■□□□□ 0.2
TREX1-201ENST00000433541 PSMC3P17980 439 aa16.32■□□□□ 0.2
TREX1-201ENST00000433541 FCARP24071 287 aa16.32■□□□□ 0.2
TREX1-201ENST00000433541 GDI1P31150 447 aa16.32■□□□□ 0.2
TREX1-201ENST00000433541 ZXDAP98168 799 aa16.32■□□□□ 0.2
TREX1-201ENST00000433541 C10orf120Q5SQS8 335 aa16.32■□□□□ 0.2
TREX1-201ENST00000433541 PMF1Q6P1K2 205 aa16.32■□□□□ 0.2
TREX1-201ENST00000433541 POTEHQ6S545 545 aa16.32■□□□□ 0.2
TREX1-201ENST00000433541 VITQ6UXI7 678 aa16.32■□□□□ 0.2
TREX1-201ENST00000433541 CCDC186Q7Z3E2 898 aa16.32■□□□□ 0.2
TREX1-201ENST00000433541 TADA2BQ86TJ2 420 aa16.32■□□□□ 0.2
TREX1-201ENST00000433541 CUL9Q8IWT3 2517 aa16.32■□□□□ 0.2
TREX1-201ENST00000433541 BPIFB1Q8TDL5 484 aa16.32■□□□□ 0.2
TREX1-201ENST00000433541 SLC22A12Q96S37 553 aa16.32■□□□□ 0.2
TREX1-201ENST00000433541 ANP32EQ9BTT0 268 aa16.32■□□□□ 0.2
TREX1-201ENST00000433541 PLA2G2FQ9BZM2 168 aa16.32■□□□□ 0.2
TREX1-201ENST00000433541 CCSER2Q9H7U1 834 aa16.32■□□□□ 0.2
TREX1-201ENST00000433541 DUSP12Q9UNI6 340 aa16.32■□□□□ 0.2
TREX1-201ENST00000433541 NCANO14594 1321 aa16.31■□□□□ 0.2
TREX1-201ENST00000433541 STK25O00506 426 aa16.31■□□□□ 0.2
TREX1-201ENST00000433541 TLR5O60602 858 aa16.31■□□□□ 0.2
TREX1-201ENST00000433541 CCDC172P0C7W6 258 aa16.31■□□□□ 0.2
TREX1-201ENST00000433541 IRF1P10914 325 aa16.31■□□□□ 0.2
TREX1-201ENST00000433541 RARGP13631 454 aa16.31■□□□□ 0.2
TREX1-201ENST00000433541 PFKLP17858 780 aa16.31■□□□□ 0.2
TREX1-201ENST00000433541 ACADSBP45954 432 aa16.31■□□□□ 0.2
TREX1-201ENST00000433541 PSEN1P49768 467 aa16.31■□□□□ 0.2
TREX1-201ENST00000433541 YWHAGP61981 247 aaKnown RBP eCLIP16.31■□□□□ 0.2
TREX1-201ENST00000433541 GPC5P78333 572 aa16.31■□□□□ 0.2
TREX1-201ENST00000433541 NR1I3Q14994 352 aa16.31■□□□□ 0.2
TREX1-201ENST00000433541 PKDCCQ504Y2 493 aa16.31■□□□□ 0.2
TREX1-201ENST00000433541 RAB41Q5JT25 222 aa16.31■□□□□ 0.2
TREX1-201ENST00000433541 BTBD8Q5XKL5 378 aa16.31■□□□□ 0.2
TREX1-201ENST00000433541 FMNL3Q8IVF7 1028 aa16.31■□□□□ 0.2
TREX1-201ENST00000433541 IPO4Q8TEX9 1081 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms