RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 WDR75Q8IWA0 830 aaKnown RBP12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 ABRAQ8N0Z2 381 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 SLC44A1Q8WWI5 657 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 BTBD7Q9P203 1132 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 ZNRF3Q9ULT6 936 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 DNAJC16Q9Y2G8 782 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 TBC1D30Q9Y2I9 924 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 PLLPQ9Y342 182 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 COQ4Q9Y3A0 265 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 TTLL13PA6NNM8 815 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 H3BSA7 217 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 P4HBP07237 508 aaKnown RBP12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 SRGAP2CP0DJJ0 459 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 SRGAP2BP0DMP2 458 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 YWHABP31946 246 aaKnown RBP12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 CPOXP36551 454 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 CDKN2BP42772 138 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 ACOT2P49753 483 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 OGDHQ02218 1023 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 GCNT1Q02742 428 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 CYP24A1Q07973 514 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 CCDC142Q17RM4 750 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 TTC39BQ5VTQ0 682 aaPredicted RBP12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 PLEKHA7Q6IQ23 1121 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 AMIGO3Q86WK7 504 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 RFX6Q8HWS3 928 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 CERS5Q8N5B7 392 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 KCTD17Q8N5Z5 321 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 LRRN4Q8WUT4 740 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 TRIM56Q9BRZ2 755 aaKnown RBP12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 CALN1Q9BXU9 219 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 KMT5AQ9NQR1 393 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 UBAP1Q9NZ09 502 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 NYAP2Q9P242 653 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 CDH22Q9UJ99 828 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 POMPQ9Y244 141 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 HBS1LQ9Y450 684 aaKnown RBP12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 MAP3K6O95382 1288 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 GH2P01242 217 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 HLA-DRAP01903 254 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 SNRPAP09012 282 aaKnown RBP12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 FDFT1P37268 417 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 SLC18A2Q05940 514 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 PPIDQ08752 370 aaKnown RBP12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 AOC3Q16853 763 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 ABCB5Q2M3G0 1257 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 VWA5B1Q5TIE3 1220 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 RNF168Q8IYW5 571 aaPredicted RBP12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 ARHGEF1Q92888 912 aaKnown RBP12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 ZDHHC7Q9NXF8 308 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 POLIQ9UNA4 740 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 PCDHGA4Q9Y5G9 962 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 DOT1LQ8TEK3 1739 aa12□□□□□ -0.49
HMGCS1-202ENST00000433297 ATP9BO43861 1147 aa12□□□□□ -0.49
HMGCS1-202ENST00000433297 CD48P09326 243 aa12□□□□□ -0.49
HMGCS1-202ENST00000433297 EIF3EP60228 445 aaKnown RBP12□□□□□ -0.49
HMGCS1-202ENST00000433297 ITGA9Q13797 1035 aa12□□□□□ -0.49
HMGCS1-202ENST00000433297 GRM2Q14416 872 aa12□□□□□ -0.49
HMGCS1-202ENST00000433297 PPP6R3Q5H9R7 873 aaPredicted RBP12□□□□□ -0.49
HMGCS1-202ENST00000433297 DRICH1Q6PGQ1 229 aaPredicted RBP12□□□□□ -0.49
HMGCS1-202ENST00000433297 KYAT3Q6YP21 454 aaKnown RBP12□□□□□ -0.49
HMGCS1-202ENST00000433297 SLC26A11Q86WA9 606 aa12□□□□□ -0.49
HMGCS1-202ENST00000433297 C12orf56Q8IXR9 622 aa12□□□□□ -0.49
HMGCS1-202ENST00000433297 ZNF516Q92618 1163 aa12□□□□□ -0.49
HMGCS1-202ENST00000433297 NKD2Q969F2 451 aaPredicted RBP12□□□□□ -0.49
HMGCS1-202ENST00000433297 FAF2Q96CS3 445 aa12□□□□□ -0.49
HMGCS1-202ENST00000433297 DCUN1D1Q96GG9 259 aa12□□□□□ -0.49
HMGCS1-202ENST00000433297 C7orf26Q96N11 449 aa12□□□□□ -0.49
HMGCS1-202ENST00000433297 SUDS3Q9H7L9 328 aaPredicted RBP12□□□□□ -0.49
HMGCS1-202ENST00000433297 XAB2Q9HCS7 855 aaKnown RBP12□□□□□ -0.49
HMGCS1-202ENST00000433297 E2F8A0AVK6 867 aa12□□□□□ -0.49
HMGCS1-202ENST00000433297 H0YIN7 160 aa12□□□□□ -0.49
HMGCS1-202ENST00000433297 ITM2AO43736 263 aa12□□□□□ -0.49
HMGCS1-202ENST00000433297 SMIM18P0DKX4 95 aa12□□□□□ -0.49
HMGCS1-202ENST00000433297 RBP3P10745 1247 aa12□□□□□ -0.49
HMGCS1-202ENST00000433297 NELFEP18615 380 aaKnown RBP12□□□□□ -0.49
HMGCS1-202ENST00000433297 FUT4P22083 530 aa12□□□□□ -0.49
HMGCS1-202ENST00000433297 KCNA4P22459 653 aa12□□□□□ -0.49
HMGCS1-202ENST00000433297 RPL10AP62906 217 aaKnown RBP12□□□□□ -0.49
HMGCS1-202ENST00000433297 TBL3Q12788 808 aaKnown RBP12□□□□□ -0.49
HMGCS1-202ENST00000433297 DCTN2Q13561 401 aaKnown RBP12□□□□□ -0.49
HMGCS1-202ENST00000433297 DARS2Q6PI48 645 aaKnown RBP12□□□□□ -0.49
HMGCS1-202ENST00000433297 RNF148Q8N7C7 305 aa12□□□□□ -0.49
HMGCS1-202ENST00000433297 TTC13Q8NBP0 860 aa12□□□□□ -0.49
HMGCS1-202ENST00000433297 AGR3Q8TD06 166 aa12□□□□□ -0.49
HMGCS1-202ENST00000433297 HSPH1Q92598 858 aa12□□□□□ -0.49
HMGCS1-202ENST00000433297 LRGUKQ96M69 825 aa12□□□□□ -0.49
HMGCS1-202ENST00000433297 SIKE1Q9BRV8 207 aa12□□□□□ -0.49
HMGCS1-202ENST00000433297 SLC9A2Q9UBY0 812 aa12□□□□□ -0.49
HMGCS1-202ENST00000433297 A0A0B4J269 797 aa11.99□□□□□ -0.49
HMGCS1-202ENST00000433297 PEX1O43933 1283 aa11.99□□□□□ -0.49
HMGCS1-202ENST00000433297 GTF2H1P32780 548 aa11.99□□□□□ -0.49
HMGCS1-202ENST00000433297 NPTX2P47972 431 aa11.99□□□□□ -0.49
HMGCS1-202ENST00000433297 MRPS5P82675 430 aaKnown RBP11.99□□□□□ -0.49
HMGCS1-202ENST00000433297 ZNF252P-AS1Q0IIN9 211 aa11.99□□□□□ -0.49
HMGCS1-202ENST00000433297 CBX3Q13185 183 aa11.99□□□□□ -0.49
HMGCS1-202ENST00000433297 DMP1Q13316 513 aaPredicted RBP11.99□□□□□ -0.49
HMGCS1-202ENST00000433297 SH3D19Q5HYK7 790 aa11.99□□□□□ -0.49
HMGCS1-202ENST00000433297 C6orf52Q5T4I8 152 aa11.99□□□□□ -0.49
HMGCS1-202ENST00000433297 ENOSF1Q7L5Y1 443 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms