RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 GTF2H1P32780 548 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 SLC12A3P55017 1021 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 CACNB1Q02641 598 aaPredicted RBP8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 CYLC2Q14093 348 aaPredicted RBP8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 BTG3Q14201 252 aaPredicted RBP8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 MESDQ14696 234 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 AAGABQ6PD74 315 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 LVRNQ6Q4G3 990 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 RIPOR1Q6ZS17 1223 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 ANKS1BQ7Z6G8 1248 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 NOP9Q86U38 636 aaKnown RBP8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 LRRC6Q86X45 466 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 TMPRSS6Q8IU80 811 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 CCDC110Q8TBZ0 833 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 C1orf54Q8WWF1 131 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 GAB3Q8WWW8 586 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 BADQ92934 168 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 GFM2Q969S9 779 aaKnown RBP8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 GPRASP2Q96D09 838 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 C9orf72Q96LT7 481 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 PWWP2AQ96N64 755 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 AGPAT1Q99943 283 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 PLVAPQ9BX97 442 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 RBM38Q9H0Z9 239 aaKnown RBP8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 KCNK13Q9HB14 408 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 USP29Q9HBJ7 922 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 DCTN4Q9UJW0 460 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 PLA2G4CQ9UP65 541 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 MYH11P35749 1972 aa8.04□□□□□ -1.12
CNKSR3-202ENST00000433165 SMCHD1A6NHR9 2005 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 TMEM110-MUSTN1A8MSY1 372 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 BIRC5O15392 142 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 IL1BP01584 269 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 RFX1P22670 979 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 RRM1P23921 792 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 VARSP26640 1264 aaKnown RBP8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 MAGEA4P43358 317 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 FMO5P49326 533 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 CLCN2P51788 898 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 ADCY7P51828 1080 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 ARFIP2P53365 341 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 GEMIN4P57678 1058 aaKnown RBP8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 SMAD3P84022 425 aaKnown RBP8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 ARHGAP4P98171 946 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 TBL3Q12788 808 aaKnown RBP8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 TMED1Q13445 227 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 ADRM1Q16186 407 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 NFIL3Q16649 462 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 C6orf163Q5TEZ5 329 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 RAPH1Q70E73 1250 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 SCUBE1Q8IWY4 988 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 FAM172AQ8WUF8 416 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 PRR11Q96HE9 360 aaPredicted RBP8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 DNAJC1Q96KC8 554 aaKnown RBP8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 SENP7Q9BQF6 1050 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 FBXO6Q9NRD1 293 aaPredicted RBP8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 CHST7Q9NS84 486 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 COL20A1Q9P218 1284 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 APEX2Q9UBZ4 518 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 PPM1HQ9ULR3 514 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 BARX2Q9UMQ3 279 aaPredicted RBP8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 KIAA1024Q9UPX6 916 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 TRIM43BA6NCK2 446 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 PITPNM1O00562 1244 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 NOP56O00567 594 aaKnown RBP8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 CLDN3O15551 220 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 ZNF189O75820 626 aaPredicted RBP8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 CIB2O75838 187 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 ZFXP17010 805 aaPredicted RBP8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 VPS41P49754 854 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 SERPINB8P50452 374 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 CHN2P52757 468 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 ARHGAP1Q07960 439 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 MSLNQ13421 630 aaPredicted RBP8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 DCTN2Q13561 401 aaKnown RBP8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 CCDC142Q17RM4 750 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 CELF3Q5SZQ8 465 aaKnown RBP8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 UGT2A3Q6UWM9 527 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 KYAT3Q6YP21 454 aaKnown RBP8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 RASSF3Q86WH2 238 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 MAP7D3Q8IWC1 876 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 ZBED8Q8IZ13 594 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 C4orf33Q8N1A6 199 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 ZCCHC9Q8N567 271 aaKnown RBP8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 TRIM43Q96BQ3 446 aaPredicted RBP8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 DCLK3Q9C098 648 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 VPS11Q9H270 941 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 HIPK3Q9H422 1215 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 RMI1Q9H9A7 625 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 SEPT11Q9NVA2 429 aaKnown RBP8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 TCEAL9Q9UHQ7 104 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 POLIQ9UNA4 740 aa8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.03□□□□□ -1.12
CNKSR3-202ENST00000433165 A0A0G2JND7 137 aa8.02□□□□□ -1.13
CNKSR3-202ENST00000433165 POTEB3A0JP26 581 aa8.02□□□□□ -1.13
CNKSR3-202ENST00000433165 CAPN14A8MX76 684 aa8.02□□□□□ -1.13
CNKSR3-202ENST00000433165 SPOPO43791 374 aa8.02□□□□□ -1.13
CNKSR3-202ENST00000433165 TFAP2AP05549 437 aa8.02□□□□□ -1.13
CNKSR3-202ENST00000433165 DLDP09622 509 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms