RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 CKAP4Q07065 602 aaKnown RBP6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 EARS2Q5JPH6 523 aaKnown RBP6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 PAPD7Q5XG87 772 aaKnown RBP6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 PSRC1Q6PGN9 363 aaPredicted RBP6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 GADL1Q6ZQY3 521 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 LRRTM4Q86VH4 590 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 MRIQ9BWK5 157 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 SMG9Q9H0W8 520 aaKnown RBP6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 ARMT1Q9H993 441 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 PICK1Q9NRD5 415 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 VPS54Q9P1Q0 977 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 MORF4L1Q9UBU8 362 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 MYH2Q9UKX2 1941 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 PLXNA1Q9UIW2 1896 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 POM121BA6NF01 834 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 ANKRD65E5RJM6 399 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 SHOX2O60902 331 aaPredicted RBP6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 ULK1O75385 1050 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 UBXN7O94888 489 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 ADRB2P07550 413 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 SESN3P58005 492 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 UBXN1Q04323 297 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 EPHX4Q8IUS5 362 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 MIER2Q8N344 545 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 ANKRD13CQ8N6S4 541 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 NELFBQ8WX92 580 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 STAMQ92783 540 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 TSGA13Q96PP4 275 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 TMEM237Q96Q45 408 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 CRACR2AQ9BSW2 395 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 NACAP1Q9BZK3 213 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 FAM107BQ9H098 131 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 BLZF1Q9H2G9 400 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 GHITMQ9H3K2 345 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 PLSCR4Q9NRQ2 329 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 B4GALT6Q9UBX8 382 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 MYH3P11055 1940 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 PLXNB2O15031 1838 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 TTC26A0AVF1 554 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 RHPN2P1A8MT19 583 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 ARVCFO00192 962 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 MEIS1O00470 390 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 SRGAP2O75044 1071 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 F11P03951 625 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 CSTBP04080 98 aaKnown RBP6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 GNAT2P19087 354 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 POLD2P49005 469 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 CASP5P51878 434 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 CTSWP56202 376 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 HERVK_113P62684 666 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 ATP2C1P98194 919 aaPredicted RBP6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 ICA1Q05084 483 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 RING1Q06587 406 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 MAP4K2Q12851 820 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 AUHQ13825 339 aaKnown RBP6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 WSCD2Q2TBF2 565 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 CCDC122Q5T0U0 273 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 ZNF658Q5TYW1 1059 aaPredicted RBP6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 ISLR2Q6UXK2 745 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 RIPOR1Q6ZS17 1223 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 TADA2BQ86TJ2 420 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 VPS52Q8N1B4 723 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 CCDC33Q8N5R6 958 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 OR8K1Q8NGG5 319 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 ZUFSPQ96AP4 578 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 CAPZA3Q96KX2 299 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 PYM1Q9BRP8 204 aaKnown RBP6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 UBAC1Q9BSL1 405 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 RNF41Q9H4P4 317 aaPredicted RBP6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 SNX13Q9Y5W8 968 aa6.56□□□□□ -1.36
NIPAL3-205ENST00000432012 A0A0G2JMZ2 1700 aa6.55□□□□□ -1.36
NIPAL3-205ENST00000432012 A0A087WUV0 522 aaPredicted RBP6.55□□□□□ -1.36
NIPAL3-205ENST00000432012 PRKAB2O43741 272 aa6.55□□□□□ -1.36
NIPAL3-205ENST00000432012 B3GALT2O43825 422 aa6.55□□□□□ -1.36
NIPAL3-205ENST00000432012 TUSC2O75896 110 aa6.55□□□□□ -1.36
NIPAL3-205ENST00000432012 CLEC2LP0C7M8 214 aa6.55□□□□□ -1.36
NIPAL3-205ENST00000432012 NLRP5P59047 1200 aa6.55□□□□□ -1.36
NIPAL3-205ENST00000432012 IL1RL1Q01638 556 aa6.55□□□□□ -1.36
NIPAL3-205ENST00000432012 MRPL28Q13084 256 aaKnown RBP6.55□□□□□ -1.36
NIPAL3-205ENST00000432012 PSMD6Q15008 389 aa6.55□□□□□ -1.36
NIPAL3-205ENST00000432012 ZNF174Q15697 407 aa6.55□□□□□ -1.36
NIPAL3-205ENST00000432012 TTC38Q5R3I4 469 aa6.55□□□□□ -1.36
NIPAL3-205ENST00000432012 RPUSD3Q6P087 351 aaKnown RBP6.55□□□□□ -1.36
NIPAL3-205ENST00000432012 POMZP3Q6PJE2 187 aa6.55□□□□□ -1.36
NIPAL3-205ENST00000432012 NUP54Q7Z3B4 507 aa6.55□□□□□ -1.36
NIPAL3-205ENST00000432012 BMP8AQ7Z5Y6 402 aa6.55□□□□□ -1.36
NIPAL3-205ENST00000432012 CACNA2D3Q8IZS8 1091 aa6.55□□□□□ -1.36
NIPAL3-205ENST00000432012 ANKRD35Q8N283 1001 aa6.55□□□□□ -1.36
NIPAL3-205ENST00000432012 VWA5B2Q8N398 1253 aa6.55□□□□□ -1.36
NIPAL3-205ENST00000432012 FAM76AQ8TAV0 307 aa6.55□□□□□ -1.36
NIPAL3-205ENST00000432012 GDAP1L1Q96MZ0 367 aa6.55□□□□□ -1.36
NIPAL3-205ENST00000432012 KRT84Q9NSB2 600 aa6.55□□□□□ -1.36
NIPAL3-205ENST00000432012 RMND1Q9NWS8 449 aa6.55□□□□□ -1.36
NIPAL3-205ENST00000432012 DNAJC28Q9NX36 388 aa6.55□□□□□ -1.36
NIPAL3-205ENST00000432012 CBLCQ9ULV8 474 aa6.55□□□□□ -1.36
NIPAL3-205ENST00000432012 SLC4A4Q9Y6R1 1079 aa6.55□□□□□ -1.36
NIPAL3-205ENST00000432012 A0A0B4J203 849 aa6.55□□□□□ -1.36
NIPAL3-205ENST00000432012 A0A1W2PQC6 194 aa6.55□□□□□ -1.36
NIPAL3-205ENST00000432012 LGALS16A8MUM7 142 aa6.55□□□□□ -1.36
NIPAL3-205ENST00000432012 PROB1E7EW31 1015 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms