RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 PEX1O43933 1283 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 SNUPNO95149 360 aaKnown RBP12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 DDX39BQ13838 428 aaKnown RBP12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 BAATQ14032 418 aaPredicted RBP12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 RAD18Q9NS91 495 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 CYP11B1P15538 503 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 PTPN4P29074 926 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 SEPHS2Q99611 448 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 NIF3L1Q9GZT8 377 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 NMRK2Q9NPI5 230 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 SCAF8Q9UPN6 1271 aaKnown RBP12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 SMAPO00193 183 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 VWA5AO00534 786 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 NFYCQ13952 458 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 SV2CQ496J9 727 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 UGT3A1Q6NUS8 523 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 ZSWIM2Q8NEG5 633 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 ZSCAN18Q8TBC5 510 aaPredicted RBP12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 SRPK1Q96SB4 655 aaKnown RBP12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 MOV10L1Q9BXT6 1211 aaKnown RBP12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 C10orf120Q5SQS8 335 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 KCNV1Q6PIU1 500 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 FOXR1Q6PIV2 292 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 C16orf86Q6ZW13 317 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 EPB41L4AQ9HCS5 686 aaPredicted RBP12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 VTA1Q9NP79 307 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 PLAGL2Q9UPG8 496 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 TRIM43BA6NCK2 446 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 SAC3D1A6NKF1 404 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 F8W810 466 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 BCL10O95999 233 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 NDUFB10O96000 172 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 CD4P01730 458 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 EPHB2P29323 1055 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 PACS2Q86VP3 889 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 ENGASEQ8NFI3 743 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 PTPRHQ9HD43 1115 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 M0QYT0 321 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 AGRPO00253 132 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 TRAPPC3O43617 180 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 ST13P50502 369 aaKnown RBP12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 UBASH3BQ8TF42 649 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 GPRC5DQ9NZD1 345 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 PIM2Q9P1W9 311 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 RARGP13631 454 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 FEN1P39748 380 aaKnown RBP12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 HARS2P49590 506 aaKnown RBP12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 NPEPPSP55786 919 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 OTUD3Q5T2D3 398 aaPredicted RBP12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 CHMP1BQ7LBR1 199 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 C2orf69Q8N8R5 385 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 SMARCAD1Q9H4L7 1026 aa12.1□□□□□ -0.47
RIMKLA-202ENST00000431473 ZSCAN5CA6NGD5 496 aaPredicted RBP12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 FAM58BPP0C7Q3 252 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 FAM200BP0CF97 657 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 MAPK10P53779 464 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 RDM1Q8NG50 284 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 ATP8B4Q8TF62 1192 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 SPATA16Q9BXB7 569 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 C2orf81A6NN90 581 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 PIK3CDO00329 1044 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 ASNA1O43681 348 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 COX10Q12887 443 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 BFSP2Q13515 415 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 DGKDQ16760 1214 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 TAF2Q6P1X5 1199 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 VN1R5Q7Z5H4 357 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 OMA1Q96E52 524 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 EPS8L2Q9H6S3 715 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 KCNH7Q9NS40 1196 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 PRR12Q9ULL5 1215 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 CCNG1P51959 295 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 IL5RAQ01344 420 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 MGAT5BQ3V5L5 792 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 KLHL17Q6TDP4 642 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 UXS1Q8NBZ7 420 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 FBXO25Q8TCJ0 367 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 ARMCX1Q9P291 453 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 SNX8Q9Y5X2 465 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 C16orf72Q14CZ0 275 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 DGKKQ5KSL6 1271 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 C11orf88Q6PI97 169 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 EFL1Q7Z2Z2 1120 aaKnown RBP12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 ATG16L2Q8NAA4 619 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 ISCA1Q9BUE6 129 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 NPTXRO95502 500 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 RPA1P27694 616 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 FLT3P36888 993 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 ADRM1Q16186 407 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 TRMT5Q32P41 509 aaKnown RBP12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 ATP6AP1LQ52LC2 224 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 CENPTQ96BT3 561 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 UBP1Q9NZI7 540 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 L1RE1Q9UN81 338 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 RFC5P40937 340 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 AGKQ53H12 422 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 C4orf22Q6V702 233 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 SLC20A1Q8WUM9 679 aa12.09□□□□□ -0.47
RIMKLA-202ENST00000431473 APOL2Q9BQE5 337 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms