RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 TMOD4Q9NZQ9 345 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 RAPGEFL1Q9UHV5 662 aa3.67□□□□□ -1.82
HMGB1P27-201ENST00000431429 BTBD11A6QL63 1104 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 F5H697 171 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 FCHO1O14526 889 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 AGR2O95994 175 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 TK1P04183 234 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 ERBB2P04626 1255 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 GYS1P13807 737 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 KLRK1P26718 216 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 RBL1P28749 1068 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 EPHA3P29320 983 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 PGDP52209 483 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 PRKAA2P54646 552 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 ALDH18A1P54886 795 aaKnown RBP3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 ADAM17P78536 824 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 FPGSQ05932 587 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 SIM2Q14190 667 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 CDSNQ15517 529 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 MAPRE1Q15691 268 aaKnown RBP3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 JAKMIP3Q5VZ66 844 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 FAM90A2PQ658T7 463 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 MSANTD2Q6P1R3 559 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 KLHL17Q6TDP4 642 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 ANKS1BQ7Z6G8 1248 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 FTSJ3Q8IY81 847 aaKnown RBP3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 NRSN1Q8IZ57 195 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 SPARTQ8N0X7 666 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 CLASRPQ8N2M8 674 aaKnown RBP3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 LNX2Q8N448 690 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 TEX19Q8NA77 164 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 CPT1CQ8TCG5 803 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 TMEM171Q8WVE6 324 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 SOCS4Q8WXH5 440 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 ASB12Q8WXK4 309 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 TMEM125Q96AQ2 219 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 CTHRC1Q96CG8 243 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 C20orf173Q96LM9 149 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 ADOQ96SZ5 270 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 ALOXE3Q9BYJ1 711 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 ZCWPW1Q9H0M4 648 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 KCNK9Q9NPC2 374 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 KIF17Q9P2E2 1029 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 SERTAD3Q9UJW9 196 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 PNMA2Q9UL42 364 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 DAPP1Q9UN19 280 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 GABRQQ9UN88 632 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 MAP3K2Q9Y2U5 619 aa3.66□□□□□ -1.82
HMGB1P27-201ENST00000431429 FAM90A20PA6NIJ5 464 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 H0Y3Z8 333 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 J3KTA2 159 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 CCNT2O60583 730 aaKnown RBP3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 CDKL5O76039 1030 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 USP1O94782 785 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 SPDEFO95238 335 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 PEX11BO96011 259 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 PRKCBP05771 671 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 PYGLP06737 847 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 PPP3CBP16298 524 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 HOXA5P20719 270 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 PCSK6P29122 969 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 NTSR1P30989 418 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 MAPK9P45984 424 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 GATMP50440 423 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 PRKAG1P54619 331 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 RESTQ13127 1097 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 TBX2Q13207 712 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 CRHR2Q13324 411 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 SMAD1Q15797 465 aaKnown RBP3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 TIGD6Q17RP2 521 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 HS1BP3Q53T59 392 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 KIAA0895LQ68EN5 471 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 SLC9A4Q6AI14 798 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 NFRKBQ6P4R8 1299 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 VWA1Q6PCB0 445 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 CLEC4GQ6UXB4 293 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 PIK3AP1Q6ZUJ8 805 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 BBS12Q6ZW61 710 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 ARHGEF19Q8IW93 802 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 IZUMO1Q8IYV9 350 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 METTL25Q8N6Q8 603 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 NAXEQ8NCW5 288 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 CPEB3Q8NE35 698 aaKnown RBP3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 OR6Y1Q8NGX8 325 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 SLC30A5Q8TAD4 765 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 CXorf38Q8TB03 319 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 ABHD5Q8WTS1 349 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 LPIN2Q92539 896 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 LENG9Q96B70 501 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 WDYHV1Q96HA8 205 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 ZBTB45Q96K62 511 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 ZSCAN31Q96LW9 406 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 HIST1H2AAQ96QV6 131 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 HAPLN3Q96S86 360 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 C17orf80Q9BSJ5 609 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 C1QTNF3Q9BXJ4 246 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 INO80BQ9C086 356 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 VPS16Q9H269 839 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 ABHD16BQ9H3Z7 469 aa3.65□□□□□ -1.83
HMGB1P27-201ENST00000431429 WASH6PQ9NQA3 447 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms