RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 LMAN1LQ9HAT1 526 aa10.37□□□□□ -0.75
HDAC6-207ENST00000430858 TLR8Q9NR97 1041 aaKnown RBP10.37□□□□□ -0.75
HDAC6-207ENST00000430858 SPATA6Q9NWH7 488 aaPredicted RBP10.37□□□□□ -0.75
HDAC6-207ENST00000430858 DUS2Q9NX74 493 aaKnown RBP10.37□□□□□ -0.75
HDAC6-207ENST00000430858 GMIPQ9P107 970 aa10.37□□□□□ -0.75
HDAC6-207ENST00000430858 KIAA1257Q9ULG3 409 aa10.37□□□□□ -0.75
HDAC6-207ENST00000430858 SCML2Q9UQR0 700 aa10.37□□□□□ -0.75
HDAC6-207ENST00000430858 CPQQ9Y646 472 aa10.37□□□□□ -0.75
HDAC6-207ENST00000430858 MUC6Q6W4X9 2439 aa10.37□□□□□ -0.75
HDAC6-207ENST00000430858 SLC9A3R1O14745 358 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-207ENST00000430858 COCHO43405 550 aa10.36□□□□□ -0.75
HDAC6-207ENST00000430858 LAMTOR5O43504 91 aa10.36□□□□□ -0.75
HDAC6-207ENST00000430858 MBL2P11226 248 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-207ENST00000430858 CHRNB1P11230 501 aa10.36□□□□□ -0.75
HDAC6-207ENST00000430858 ARSAP15289 507 aa10.36□□□□□ -0.75
HDAC6-207ENST00000430858 ACO1P21399 889 aaKnown RBP10.36□□□□□ -0.75
HDAC6-207ENST00000430858 ERCC5P28715 1186 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-207ENST00000430858 KIF11P52732 1056 aa10.36□□□□□ -0.75
HDAC6-207ENST00000430858 GCNT1Q02742 428 aa10.36□□□□□ -0.75
HDAC6-207ENST00000430858 NR1H3Q13133 447 aa10.36□□□□□ -0.75
HDAC6-207ENST00000430858 LRRC32Q14392 662 aa10.36□□□□□ -0.75
HDAC6-207ENST00000430858 TPD52L1Q16890 204 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-207ENST00000430858 EML3Q32P44 896 aa10.36□□□□□ -0.75
HDAC6-207ENST00000430858 DPCR1Q3MIW9 517 aa10.36□□□□□ -0.75
HDAC6-207ENST00000430858 SGO2Q562F6 1265 aa10.36□□□□□ -0.75
HDAC6-207ENST00000430858 CT47A1Q5JQC4 288 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-207ENST00000430858 DGKKQ5KSL6 1271 aa10.36□□□□□ -0.75
HDAC6-207ENST00000430858 TXNDC11Q6PKC3 985 aa10.36□□□□□ -0.75
HDAC6-207ENST00000430858 MAMSTRQ6ZN01 415 aa10.36□□□□□ -0.75
HDAC6-207ENST00000430858 GPRIN1Q7Z2K8 1008 aa10.36□□□□□ -0.75
HDAC6-207ENST00000430858 CREBRFQ8IUR6 639 aa10.36□□□□□ -0.75
HDAC6-207ENST00000430858 PPM1KQ8N3J5 372 aa10.36□□□□□ -0.75
HDAC6-207ENST00000430858 UBR7Q8N806 425 aa10.36□□□□□ -0.75
HDAC6-207ENST00000430858 ANKRD52Q8NB46 1076 aa10.36□□□□□ -0.75
HDAC6-207ENST00000430858 TTC16Q8NEE8 873 aa10.36□□□□□ -0.75
HDAC6-207ENST00000430858 EXOC4Q96A65 974 aa10.36□□□□□ -0.75
HDAC6-207ENST00000430858 JAKMIP2Q96AA8 810 aa10.36□□□□□ -0.75
HDAC6-207ENST00000430858 CNOT6LQ96LI5 555 aaKnown RBP10.36□□□□□ -0.75
HDAC6-207ENST00000430858 MED15Q96RN5 788 aa10.36□□□□□ -0.75
HDAC6-207ENST00000430858 NACA2Q9H009 215 aa10.36□□□□□ -0.75
HDAC6-207ENST00000430858 ECT2Q9H8V3 914 aa10.36□□□□□ -0.75
HDAC6-207ENST00000430858 FAM86C1Q9NVL1 165 aa10.36□□□□□ -0.75
HDAC6-207ENST00000430858 SMPD4Q9NXE4 827 aa10.36□□□□□ -0.75
HDAC6-207ENST00000430858 WNT6Q9Y6F9 365 aa10.36□□□□□ -0.75
HDAC6-207ENST00000430858 COL4A3Q01955 1670 aa10.36□□□□□ -0.75
HDAC6-207ENST00000430858 COL4A2P08572 1712 aa10.36□□□□□ -0.75
HDAC6-207ENST00000430858 GREB1Q4ZG55 1949 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 DENND4CQ5VZ89 1909 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 E2F8A0AVK6 867 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 OTOL1A6NHN0 477 aaPredicted RBP10.35□□□□□ -0.75
HDAC6-207ENST00000430858 PROB1E7EW31 1015 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 TLR5O60602 858 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 NFATC1O95644 943 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 PAEPP09466 180 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 VDRP11473 427 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 CD19P15391 556 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 NBL1P41271 181 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 PSEN1P49768 467 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 BCAT1P54687 386 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 GRSF1Q12849 480 aaKnown RBP eCLIP10.35□□□□□ -0.75
HDAC6-207ENST00000430858 PON2Q15165 354 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 GOLGA7BQ2TAP0 167 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 ZNF528Q3MIS6 628 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 TMEM270Q6UE05 265 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 CCDC186Q7Z3E2 898 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 FAM114A1Q8IWE2 563 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 SYNPOQ8N3V7 929 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 FAM81BQ96LP2 452 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 PHOX2BQ99453 314 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 INTS2Q9H0H0 1204 aaKnown RBP10.35□□□□□ -0.75
HDAC6-207ENST00000430858 THAP9Q9H5L6 903 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 CCSER2Q9H7U1 834 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 CYLDQ9NQC7 956 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 CFAP97Q9P2B7 532 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 TBC1D14Q9P2M4 693 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 HESX1Q9UBX0 185 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 TSPAN16Q9UKR8 245 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 FBXO4Q9UKT5 387 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 PCDHB4Q9Y5E5 795 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 USP3Q9Y6I4 520 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 OBSL1O75147 1896 aa10.35□□□□□ -0.75
HDAC6-207ENST00000430858 F5P12259 2224 aa10.34□□□□□ -0.75
HDAC6-207ENST00000430858 GTPBP10A4D1E9 387 aaKnown RBP10.34□□□□□ -0.75
HDAC6-207ENST00000430858 O00370 1275 aa10.34□□□□□ -0.75
HDAC6-207ENST00000430858 TRDMT1O14717 391 aaKnown RBP10.34□□□□□ -0.75
HDAC6-207ENST00000430858 XPO1O14980 1071 aaKnown RBP10.34□□□□□ -0.75
HDAC6-207ENST00000430858 CYP26A1O43174 497 aa10.34□□□□□ -0.75
HDAC6-207ENST00000430858 SP9P0CG40 484 aa10.34□□□□□ -0.75
HDAC6-207ENST00000430858 RALAP11233 206 aa10.34□□□□□ -0.75
HDAC6-207ENST00000430858 GJA4P35212 333 aa10.34□□□□□ -0.75
HDAC6-207ENST00000430858 ATP5C1P36542 298 aaKnown RBP10.34□□□□□ -0.75
HDAC6-207ENST00000430858 MTIF2P46199 727 aaKnown RBP10.34□□□□□ -0.75
HDAC6-207ENST00000430858 MRE11P49959 708 aa10.34□□□□□ -0.75
HDAC6-207ENST00000430858 CCR3P51677 355 aa10.34□□□□□ -0.75
HDAC6-207ENST00000430858 BST2Q10589 180 aaKnown RBP10.34□□□□□ -0.75
HDAC6-207ENST00000430858 MTAPQ13126 283 aa10.34□□□□□ -0.75
HDAC6-207ENST00000430858 CCINQ13939 588 aa10.34□□□□□ -0.75
HDAC6-207ENST00000430858 PPP2R5DQ14738 602 aa10.34□□□□□ -0.75
HDAC6-207ENST00000430858 STILQ15468 1287 aa10.34□□□□□ -0.75
HDAC6-207ENST00000430858 TMEM196Q5HYL7 178 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms