RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 NAA15Q9BXJ9 866 aaKnown RBP18.4■□□□□ 0.54
CTSD-203ENST00000429746 UBXN6Q9BZV1 441 aa18.4■□□□□ 0.54
CTSD-203ENST00000429746 TRPV5Q9NQA5 729 aa18.4■□□□□ 0.54
CTSD-203ENST00000429746 TDP1Q9NUW8 608 aa18.4■□□□□ 0.54
CTSD-203ENST00000429746 GMIPQ9P107 970 aa18.4■□□□□ 0.54
CTSD-203ENST00000429746 LIMA1Q9UHB6 759 aaKnown RBP18.4■□□□□ 0.54
CTSD-203ENST00000429746 CA14Q9ULX7 337 aa18.4■□□□□ 0.54
CTSD-203ENST00000429746 PCDHB4Q9Y5E5 795 aa18.4■□□□□ 0.54
CTSD-203ENST00000429746 DMDP11532 3685 aa18.39■□□□□ 0.54
CTSD-203ENST00000429746 LRRC10BA6NIK2 292 aa18.39■□□□□ 0.53
CTSD-203ENST00000429746 CYP26A1O43174 497 aa18.39■□□□□ 0.53
CTSD-203ENST00000429746 PRKCSHP14314 528 aaPredicted RBP18.39■□□□□ 0.53
CTSD-203ENST00000429746 BRD2P25440 801 aaKnown RBP18.39■□□□□ 0.53
CTSD-203ENST00000429746 GDI1P31150 447 aa18.39■□□□□ 0.53
CTSD-203ENST00000429746 SLC7A9P82251 487 aa18.39■□□□□ 0.53
CTSD-203ENST00000429746 PDE4CQ08493 712 aa18.39■□□□□ 0.53
CTSD-203ENST00000429746 IFRD2Q12894 506 aaPredicted RBP18.39■□□□□ 0.53
CTSD-203ENST00000429746 IQCB1Q15051 598 aa18.39■□□□□ 0.53
CTSD-203ENST00000429746 SGO2Q562F6 1265 aa18.39■□□□□ 0.53
CTSD-203ENST00000429746 SCD5Q86SK9 330 aa18.39■□□□□ 0.53
CTSD-203ENST00000429746 PIGZQ86VD9 579 aa18.39■□□□□ 0.53
CTSD-203ENST00000429746 CELF5Q8N6W0 485 aaKnown RBP18.39■□□□□ 0.53
CTSD-203ENST00000429746 FLCNQ8NFG4 579 aa18.39■□□□□ 0.53
CTSD-203ENST00000429746 DNASE1L2Q92874 299 aa18.39■□□□□ 0.53
CTSD-203ENST00000429746 FBXO32Q969P5 355 aa18.39■□□□□ 0.53
CTSD-203ENST00000429746 ZFYVE19Q96K21 471 aa18.39■□□□□ 0.53
CTSD-203ENST00000429746 FAM83CQ9BQN1 747 aa18.39■□□□□ 0.53
CTSD-203ENST00000429746 TRMT61BQ9BVS5 477 aaKnown RBP18.39■□□□□ 0.53
CTSD-203ENST00000429746 ARHGEF3Q9NR81 526 aa18.39■□□□□ 0.53
CTSD-203ENST00000429746 TRPM5Q9NZQ8 1165 aa18.39■□□□□ 0.53
CTSD-203ENST00000429746 CHORDC1Q9UHD1 332 aaPredicted RBP18.39■□□□□ 0.53
CTSD-203ENST00000429746 ARHGAP26Q9UNA1 814 aa18.39■□□□□ 0.53
CTSD-203ENST00000429746 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.39■□□□□ 0.53
CTSD-203ENST00000429746 SCML2Q9UQR0 700 aa18.39■□□□□ 0.53
CTSD-203ENST00000429746 FAM186AA6NE01 2351 aa18.39■□□□□ 0.53
CTSD-203ENST00000429746 OTOL1A6NHN0 477 aaPredicted RBP18.38■□□□□ 0.53
CTSD-203ENST00000429746 CHADO15335 359 aa18.38■□□□□ 0.53
CTSD-203ENST00000429746 PI15O43692 258 aa18.38■□□□□ 0.53
CTSD-203ENST00000429746 ATP1A3P13637 1013 aa18.38■□□□□ 0.53
CTSD-203ENST00000429746 PFKLP17858 780 aa18.38■□□□□ 0.53
CTSD-203ENST00000429746 PPP3CCP48454 512 aa18.38■□□□□ 0.53
CTSD-203ENST00000429746 STARD6P59095 220 aa18.38■□□□□ 0.53
CTSD-203ENST00000429746 CNGA2Q16280 664 aa18.38■□□□□ 0.53
CTSD-203ENST00000429746 AOPEPQ8N6M6 819 aa18.38■□□□□ 0.53
CTSD-203ENST00000429746 BPIFB1Q8TDL5 484 aa18.38■□□□□ 0.53
CTSD-203ENST00000429746 SLC35F5Q8WV83 523 aa18.38■□□□□ 0.53
CTSD-203ENST00000429746 ATOH1Q92858 354 aaPredicted RBP18.38■□□□□ 0.53
CTSD-203ENST00000429746 SHDQ96IW2 340 aa18.38■□□□□ 0.53
CTSD-203ENST00000429746 SLITRK1Q96PX8 696 aa18.38■□□□□ 0.53
CTSD-203ENST00000429746 CCSER2Q9H7U1 834 aa18.38■□□□□ 0.53
CTSD-203ENST00000429746 TRPC7Q9HCX4 862 aa18.38■□□□□ 0.53
CTSD-203ENST00000429746 HPS4Q9NQG7 708 aa18.38■□□□□ 0.53
CTSD-203ENST00000429746 EHD2Q9NZN4 543 aa18.38■□□□□ 0.53
CTSD-203ENST00000429746 KIAA1257Q9ULG3 409 aa18.38■□□□□ 0.53
CTSD-203ENST00000429746 MIA3Q5JRA6 1907 aa18.37■□□□□ 0.53
CTSD-203ENST00000429746 TRAV19A0A0A6YYK7 116 aa18.37■□□□□ 0.53
CTSD-203ENST00000429746 SYCE3A1L190 88 aa18.37■□□□□ 0.53
CTSD-203ENST00000429746 PROB1E7EW31 1015 aa18.37■□□□□ 0.53
CTSD-203ENST00000429746 XPO1O14980 1071 aaKnown RBP18.37■□□□□ 0.53
CTSD-203ENST00000429746 EPHB6O15197 1021 aa18.37■□□□□ 0.53
CTSD-203ENST00000429746 COCHO43405 550 aa18.37■□□□□ 0.53
CTSD-203ENST00000429746 PNMA6AP0CW24 399 aaPredicted RBP18.37■□□□□ 0.53
CTSD-203ENST00000429746 CD19P15391 556 aa18.37■□□□□ 0.53
CTSD-203ENST00000429746 AVPR1AP37288 418 aa18.37■□□□□ 0.53
CTSD-203ENST00000429746 PLA2G4AP47712 749 aa18.37■□□□□ 0.53
CTSD-203ENST00000429746 RPL34P49207 117 aaKnown RBP18.37■□□□□ 0.53
CTSD-203ENST00000429746 KLK7P49862 253 aa18.37■□□□□ 0.53
CTSD-203ENST00000429746 PFKPQ01813 784 aa18.37■□□□□ 0.53
CTSD-203ENST00000429746 FZD5Q13467 585 aa18.37■□□□□ 0.53
CTSD-203ENST00000429746 SLC44A4Q53GD3 710 aa18.37■□□□□ 0.53
CTSD-203ENST00000429746 ENOSF1Q7L5Y1 443 aa18.37■□□□□ 0.53
CTSD-203ENST00000429746 CCDC186Q7Z3E2 898 aa18.37■□□□□ 0.53
CTSD-203ENST00000429746 PDZD8Q8NEN9 1154 aa18.37■□□□□ 0.53
CTSD-203ENST00000429746 UBA3Q8TBC4 463 aa18.37■□□□□ 0.53
CTSD-203ENST00000429746 WBP2Q969T9 261 aa18.37■□□□□ 0.53
CTSD-203ENST00000429746 VPS16Q9H269 839 aa18.37■□□□□ 0.53
CTSD-203ENST00000429746 GANQ9H2C0 597 aa18.37■□□□□ 0.53
CTSD-203ENST00000429746 KIF9Q9HAQ2 790 aa18.37■□□□□ 0.53
CTSD-203ENST00000429746 HEBP1Q9NRV9 189 aa18.37■□□□□ 0.53
CTSD-203ENST00000429746 DLGAP2Q9P1A6 1054 aa18.37■□□□□ 0.53
CTSD-203ENST00000429746 SIK3Q9Y2K2 1263 aa18.37■□□□□ 0.53
CTSD-203ENST00000429746 MYO15AQ9UKN7 3530 aa18.37■□□□□ 0.53
CTSD-203ENST00000429746 CACNA1IQ9P0X4 2223 aa18.37■□□□□ 0.53
CTSD-203ENST00000429746 GREM1O60565 184 aa18.36■□□□□ 0.53
CTSD-203ENST00000429746 USP17L7P0C7H9 530 aa18.36■□□□□ 0.53
CTSD-203ENST00000429746 GLULP15104 373 aa18.36■□□□□ 0.53
CTSD-203ENST00000429746 HDCP19113 662 aa18.36■□□□□ 0.53
CTSD-203ENST00000429746 TUBP50607 506 aa18.36■□□□□ 0.53
CTSD-203ENST00000429746 COPB1P53618 953 aaKnown RBP18.36■□□□□ 0.53
CTSD-203ENST00000429746 BCAT1P54687 386 aa18.36■□□□□ 0.53
CTSD-203ENST00000429746 TNK2Q07912 1038 aa18.36■□□□□ 0.53
CTSD-203ENST00000429746 BST2Q10589 180 aaKnown RBP18.36■□□□□ 0.53
CTSD-203ENST00000429746 MLF2Q15773 248 aaPredicted RBP18.36■□□□□ 0.53
CTSD-203ENST00000429746 KLHDC7AQ5VTJ3 777 aa18.36■□□□□ 0.53
CTSD-203ENST00000429746 SMYD5Q6GMV2 418 aa18.36■□□□□ 0.53
CTSD-203ENST00000429746 PM20D1Q6GTS8 502 aa18.36■□□□□ 0.53
CTSD-203ENST00000429746 CCDC105Q8IYK2 499 aa18.36■□□□□ 0.53
CTSD-203ENST00000429746 FBXO44Q9H4M3 255 aa18.36■□□□□ 0.53
CTSD-203ENST00000429746 BRD9Q9H8M2 597 aa18.36■□□□□ 0.53
CTSD-203ENST00000429746 TBC1D17Q9HA65 648 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms