RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 SDHAF4Q5VUM1 108 aa17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 TIGD7Q6NT04 549 aaPredicted RBP17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 RAD9BQ6WBX8 426 aa17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 RBM15Q96T37 977 aaKnown RBP eCLIP17.74■□□□□ 0.432e-6■■■■□ 21.5
SMARCA4-203ENST00000429416 KPNA3O00505 521 aaPredicted RBP17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 PHF2O75151 1096 aa17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 TUBP50607 506 aa17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 DCLRE1AQ6PJP8 1040 aa17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 ARHGEF19Q8IW93 802 aa17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 A0A087X0B3 334 aa17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 CTIFO43310 598 aaKnown RBP17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 DARSP14868 501 aaKnown RBP17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 ACLYP53396 1101 aa17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 RASAL3Q86YV0 1011 aa17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 ZNF669Q96BR6 464 aaPredicted RBP17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 TPX2Q9ULW0 747 aaKnown RBP17.74■□□□□ 0.43
SMARCA4-203ENST00000429416 E2F8A0AVK6 867 aa17.73■□□□□ 0.43
SMARCA4-203ENST00000429416 CYP2C18P33260 490 aa17.73■□□□□ 0.43
SMARCA4-203ENST00000429416 PCK1P35558 622 aa17.73■□□□□ 0.43
SMARCA4-203ENST00000429416 DEFB106AQ8N104 65 aa17.73■□□□□ 0.43
SMARCA4-203ENST00000429416 SUSD6Q92537 303 aa17.73■□□□□ 0.43
SMARCA4-203ENST00000429416 ZBTB10Q96DT7 871 aa17.73■□□□□ 0.43
SMARCA4-203ENST00000429416 XRN1Q8IZH2 1706 aaKnown RBP17.73■□□□□ 0.43
SMARCA4-203ENST00000429416 A0A0G2JND7 137 aa17.73■□□□□ 0.43
SMARCA4-203ENST00000429416 CCNE2O96020 404 aa17.73■□□□□ 0.43
SMARCA4-203ENST00000429416 GEMP55040 296 aa17.73■□□□□ 0.43
SMARCA4-203ENST00000429416 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.73■□□□□ 0.43
SMARCA4-203ENST00000429416 ALS2CLQ60I27 953 aa17.73■□□□□ 0.43
SMARCA4-203ENST00000429416 ETNPPLQ8TBG4 499 aa17.73■□□□□ 0.43
SMARCA4-203ENST00000429416 CALML6Q8TD86 181 aa17.73■□□□□ 0.43
SMARCA4-203ENST00000429416 TRAIPQ9BWF2 469 aa17.73■□□□□ 0.43
SMARCA4-203ENST00000429416 CHD2O14647 1828 aaKnown RBP17.73■□□□□ 0.43
SMARCA4-203ENST00000429416 ARHGAP10A1A4S6 786 aa17.73■□□□□ 0.43
SMARCA4-203ENST00000429416 PYGLP06737 847 aa17.73■□□□□ 0.43
SMARCA4-203ENST00000429416 CAPRIN1Q14444 709 aaKnown RBP17.73■□□□□ 0.43
SMARCA4-203ENST00000429416 C9orf72Q96LT7 481 aa17.73■□□□□ 0.43
SMARCA4-203ENST00000429416 NCKAP1Q9Y2A7 1128 aa17.73■□□□□ 0.43
SMARCA4-203ENST00000429416 NEU2Q9Y3R4 380 aa17.73■□□□□ 0.43
SMARCA4-203ENST00000429416 POLBP06746 335 aa17.73■□□□□ 0.43
SMARCA4-203ENST00000429416 LBX1P52954 281 aa17.73■□□□□ 0.43
SMARCA4-203ENST00000429416 CASP8Q14790 479 aa17.73■□□□□ 0.43
SMARCA4-203ENST00000429416 NUGGCQ68CJ6 796 aa17.73■□□□□ 0.43
SMARCA4-203ENST00000429416 GOLGA8RI6L899 631 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 CASP5P51878 434 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 HIRAP54198 1017 aaPredicted RBP17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 ST3GAL1Q11201 340 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 HECTD3Q5T447 861 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 FBXO10Q9UK96 956 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 KDM1AO60341 852 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 SNHG28P0DPA3 235 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 MAP2K2P36507 400 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 PPP3CCP48454 512 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 FAM47EQ6ZV65 393 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 PHACTR4Q8IZ21 702 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 CCDC197Q8NCU1 140 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 GPR152Q8TDT2 470 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 APOL2Q9BQE5 337 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 TTPALQ9BTX7 342 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 SMARCAL1Q9NZC9 954 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 PARNO95453 639 aaKnown RBP17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 FGRP09769 529 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 HMOX2P30519 316 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 PDK2Q15119 407 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 NFIL3Q16649 462 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 WDR24Q96S15 920 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 CYTH2Q99418 400 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 CNOT10Q9H9A5 744 aaKnown RBP17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 COL20A1Q9P218 1284 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 PLAGL2Q9UPG8 496 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 SLC9A3R1O14745 358 aaPredicted RBP17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 LTFP02788 710 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 CSH1P0DML2 217 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 CSH2P0DML3 217 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 APBB2Q92870 758 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 NCLNQ969V3 563 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 TSPAN17Q96FV3 270 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 DCLK3Q9C098 648 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 BAIAP2L1Q9UHR4 511 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 HEATR9A2RTY3 570 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 RHOBTB1O94844 696 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 ATP5BP06576 529 aaKnown RBP17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 POLR2EP19388 210 aaKnown RBP17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 NR1D1P20393 614 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 RPL9P32969 192 aaKnown RBP17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 GLUD2P49448 558 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 PPP2R2DQ66LE6 453 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 LINC00523Q86TU6 105 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 CD274Q9NZQ7 290 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 PTCH2Q9Y6C5 1203 aa17.72■□□□□ 0.43
SMARCA4-203ENST00000429416 DBF4BQ8NFT6 615 aa17.71■□□□□ 0.43
SMARCA4-203ENST00000429416 VANGL2Q9ULK5 521 aa17.71■□□□□ 0.43
SMARCA4-203ENST00000429416 KLRG2A4D1S0 409 aaPredicted RBP17.71■□□□□ 0.43
SMARCA4-203ENST00000429416 GEMIN4P57678 1058 aaKnown RBP17.71■□□□□ 0.43
SMARCA4-203ENST00000429416 TUSC3Q13454 348 aa17.71■□□□□ 0.43
SMARCA4-203ENST00000429416 DNAAF5Q86Y56 855 aa17.71■□□□□ 0.43
SMARCA4-203ENST00000429416 PAWRQ96IZ0 340 aaKnown RBP17.71■□□□□ 0.43
SMARCA4-203ENST00000429416 C12orf42Q96LP6 360 aa17.71■□□□□ 0.43
SMARCA4-203ENST00000429416 HSD17B14Q9BPX1 270 aa17.71■□□□□ 0.43
SMARCA4-203ENST00000429416 ZNF214Q9UL59 606 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms