RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 TMC2Q8TDI7 906 aa18.12■□□□□ 0.49
TRIM39-209ENST00000428728 CCDC47Q96A33 483 aaKnown RBP18.12■□□□□ 0.49
TRIM39-209ENST00000428728 FAM49BQ9NUQ9 324 aa18.12■□□□□ 0.49
TRIM39-209ENST00000428728 GMIPQ9P107 970 aa18.12■□□□□ 0.49
TRIM39-209ENST00000428728 MAPK8IP1Q9UQF2 711 aa18.12■□□□□ 0.49
TRIM39-209ENST00000428728 CEP192Q8TEP8 1941 aa18.11■□□□□ 0.49
TRIM39-209ENST00000428728 ABCA7Q8IZY2 2146 aa18.11■□□□□ 0.49
TRIM39-209ENST00000428728 ANTXRLA6NF34 631 aa18.11■□□□□ 0.49
TRIM39-209ENST00000428728 SLC9A3R1O14745 358 aaPredicted RBP18.11■□□□□ 0.49
TRIM39-209ENST00000428728 COCHO43405 550 aa18.11■□□□□ 0.49
TRIM39-209ENST00000428728 GDF9O60383 454 aa18.11■□□□□ 0.49
TRIM39-209ENST00000428728 APBB3O95704 486 aa18.11■□□□□ 0.49
TRIM39-209ENST00000428728 HLA-DRAP01903 254 aa18.11■□□□□ 0.49
TRIM39-209ENST00000428728 TRIM49P0CI25 452 aa18.11■□□□□ 0.49
TRIM39-209ENST00000428728 TRIM49CP0CI26 452 aa18.11■□□□□ 0.49
TRIM39-209ENST00000428728 NR2F2P24468 414 aa18.11■□□□□ 0.49
TRIM39-209ENST00000428728 NDST1P52848 882 aa18.11■□□□□ 0.49
TRIM39-209ENST00000428728 DHCR24Q15392 516 aa18.11■□□□□ 0.49
TRIM39-209ENST00000428728 SF3A2Q15428 464 aaKnown RBP18.11■□□□□ 0.49
TRIM39-209ENST00000428728 SGSM1Q2NKQ1 1148 aa18.11■□□□□ 0.49
TRIM39-209ENST00000428728 C2orf27AQ580R0 203 aa18.11■□□□□ 0.49
TRIM39-209ENST00000428728 DDX42Q86XP3 938 aaKnown RBP eCLIP18.11■□□□□ 0.49
TRIM39-209ENST00000428728 SLC2A14Q8TDB8 520 aa18.11■□□□□ 0.49
TRIM39-209ENST00000428728 USP33Q8TEY7 942 aa18.11■□□□□ 0.49
TRIM39-209ENST00000428728 OVCA2Q8WZ82 227 aa18.11■□□□□ 0.49
TRIM39-209ENST00000428728 CCSER2Q9H7U1 834 aa18.11■□□□□ 0.49
TRIM39-209ENST00000428728 MMRN2Q9H8L6 949 aa18.11■□□□□ 0.49
TRIM39-209ENST00000428728 CHORDC1Q9UHD1 332 aaPredicted RBP18.11■□□□□ 0.49
TRIM39-209ENST00000428728 SPTBN2O15020 2390 aa18.11■□□□□ 0.49
TRIM39-209ENST00000428728 PLXND1Q9Y4D7 1925 aa18.1■□□□□ 0.49
TRIM39-209ENST00000428728 TNRC6BQ9UPQ9 1833 aaKnown RBP18.1■□□□□ 0.49
TRIM39-209ENST00000428728 TNFRSF10BO14763 440 aa18.1■□□□□ 0.49
TRIM39-209ENST00000428728 BEST1O76090 585 aa18.1■□□□□ 0.49
TRIM39-209ENST00000428728 EPN2O95208 641 aa18.1■□□□□ 0.49
TRIM39-209ENST00000428728 ASS1P00966 412 aaKnown RBP18.1■□□□□ 0.49
TRIM39-209ENST00000428728 ASPAP45381 313 aa18.1■□□□□ 0.49
TRIM39-209ENST00000428728 VAMP7P51809 220 aa18.1■□□□□ 0.49
TRIM39-209ENST00000428728 DGKEP52429 567 aa18.1■□□□□ 0.49
TRIM39-209ENST00000428728 KDSRQ06136 332 aa18.1■□□□□ 0.49
TRIM39-209ENST00000428728 AASDHQ4L235 1098 aaPredicted RBP18.1■□□□□ 0.49
TRIM39-209ENST00000428728 C1orf220Q5T0J3 134 aa18.1■□□□□ 0.49
TRIM39-209ENST00000428728 HECTD3Q5T447 861 aa18.1■□□□□ 0.49
TRIM39-209ENST00000428728 C12orf40Q86WS4 652 aa18.1■□□□□ 0.49
TRIM39-209ENST00000428728 SFTPA1Q8IWL2 248 aa18.1■□□□□ 0.49
TRIM39-209ENST00000428728 CCDC33Q8N5R6 958 aa18.1■□□□□ 0.49
TRIM39-209ENST00000428728 C12orf50Q8NA57 414 aaPredicted RBP18.1■□□□□ 0.49
TRIM39-209ENST00000428728 TSTD1Q8NFU3 115 aa18.1■□□□□ 0.49
TRIM39-209ENST00000428728 TMEM174Q8WUU8 243 aa18.1■□□□□ 0.49
TRIM39-209ENST00000428728 JAKMIP2Q96AA8 810 aa18.1■□□□□ 0.49
TRIM39-209ENST00000428728 SMOQ99835 787 aa18.1■□□□□ 0.49
TRIM39-209ENST00000428728 GOLPH3LQ9H4A5 285 aa18.1■□□□□ 0.49
TRIM39-209ENST00000428728 TRAF3IP3Q9Y228 551 aa18.1■□□□□ 0.49
TRIM39-209ENST00000428728 K7EQS6 105 aa18.09■□□□□ 0.49
TRIM39-209ENST00000428728 SLC30A4O14863 429 aa18.09■□□□□ 0.49
TRIM39-209ENST00000428728 DCLK1O15075 740 aa18.09■□□□□ 0.49
TRIM39-209ENST00000428728 AKAP3O75969 853 aa18.09■□□□□ 0.49
TRIM39-209ENST00000428728 RHOBTB3O94955 611 aa18.09■□□□□ 0.49
TRIM39-209ENST00000428728 KIF20AO95235 890 aa18.09■□□□□ 0.49
TRIM39-209ENST00000428728 ADH1CP00326 375 aa18.09■□□□□ 0.49
TRIM39-209ENST00000428728 IRF1P10914 325 aa18.09■□□□□ 0.49
TRIM39-209ENST00000428728 ADH5P11766 374 aa18.09■□□□□ 0.49
TRIM39-209ENST00000428728 KCNA4P22459 653 aa18.09■□□□□ 0.49
TRIM39-209ENST00000428728 ADORA2BP29275 332 aa18.09■□□□□ 0.49
TRIM39-209ENST00000428728 SLC6A11P48066 632 aa18.09■□□□□ 0.49
TRIM39-209ENST00000428728 MAP3K7CLP57077 242 aa18.09■□□□□ 0.49
TRIM39-209ENST00000428728 MESP2Q0VG99 397 aa18.09■□□□□ 0.49
TRIM39-209ENST00000428728 DPYDQ12882 1025 aa18.09■□□□□ 0.49
TRIM39-209ENST00000428728 ADGRG2Q8IZP9 1017 aa18.09■□□□□ 0.49
TRIM39-209ENST00000428728 C12orf29Q8N999 325 aa18.09■□□□□ 0.49
TRIM39-209ENST00000428728 ZMIZ2Q8NF64 920 aa18.09■□□□□ 0.49
TRIM39-209ENST00000428728 TAF4BQ92750 862 aa18.09■□□□□ 0.49
TRIM39-209ENST00000428728 LOXL4Q96JB6 756 aa18.09■□□□□ 0.49
TRIM39-209ENST00000428728 ZFRQ96KR1 1074 aaKnown RBP18.09■□□□□ 0.49
TRIM39-209ENST00000428728 TPSD1Q9BZJ3 242 aa18.09■□□□□ 0.49
TRIM39-209ENST00000428728 IMPG2Q9BZV3 1241 aa18.09■□□□□ 0.49
TRIM39-209ENST00000428728 NACA2Q9H009 215 aa18.09■□□□□ 0.49
TRIM39-209ENST00000428728 SMOC1Q9H4F8 434 aa18.09■□□□□ 0.49
TRIM39-209ENST00000428728 GDPD2Q9HCC8 539 aa18.09■□□□□ 0.49
TRIM39-209ENST00000428728 SH3BP1Q9Y3L3 701 aa18.09■□□□□ 0.49
TRIM39-209ENST00000428728 FAM237AA0A1B0GTK4 181 aa18.08■□□□□ 0.48
TRIM39-209ENST00000428728 IKBKBO14920 756 aa18.08■□□□□ 0.48
TRIM39-209ENST00000428728 KRT13P13646 458 aa18.08■□□□□ 0.48
TRIM39-209ENST00000428728 GCLMP48507 274 aa18.08■□□□□ 0.48
TRIM39-209ENST00000428728 PLK5Q496M5 336 aa18.08■□□□□ 0.48
TRIM39-209ENST00000428728 ANO7Q6IWH7 933 aa18.08■□□□□ 0.48
TRIM39-209ENST00000428728 RHBDF2Q6PJF5 856 aa18.08■□□□□ 0.48
TRIM39-209ENST00000428728 KRBA2Q6ZNG9 492 aa18.08■□□□□ 0.48
TRIM39-209ENST00000428728 TTC30AQ86WT1 665 aa18.08■□□□□ 0.48
TRIM39-209ENST00000428728 FAM186BQ8IYM0 893 aa18.08■□□□□ 0.48
TRIM39-209ENST00000428728 KIAA1958Q8N8K9 716 aa18.08■□□□□ 0.48
TRIM39-209ENST00000428728 CCDC26Q8TAB7 109 aa18.08■□□□□ 0.48
TRIM39-209ENST00000428728 TAS1R2Q8TE23 839 aa18.08■□□□□ 0.48
TRIM39-209ENST00000428728 TWNKQ96RR1 684 aa18.08■□□□□ 0.48
TRIM39-209ENST00000428728 TBC1D14Q9P2M4 693 aa18.08■□□□□ 0.48
TRIM39-209ENST00000428728 MMP17Q9ULZ9 603 aa18.08■□□□□ 0.48
TRIM39-209ENST00000428728 INVSQ9Y283 1065 aa18.08■□□□□ 0.48
TRIM39-209ENST00000428728 NCOR2Q9Y618 2525 aa18.07■□□□□ 0.48
TRIM39-209ENST00000428728 E2F8A0AVK6 867 aa18.07■□□□□ 0.48
TRIM39-209ENST00000428728 MAPK13O15264 365 aa18.07■□□□□ 0.48
TRIM39-209ENST00000428728 APODP05090 189 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms