RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 C1QTNF9P0C862 333 aa17.6■□□□□ 0.41
VARS-216ENST00000428445 PGFP49763 221 aa17.6■□□□□ 0.41
VARS-216ENST00000428445 PDE6CP51160 858 aa17.6■□□□□ 0.41
VARS-216ENST00000428445 SHC2P98077 582 aa17.6■□□□□ 0.41
VARS-216ENST00000428445 FOXC1Q12948 553 aa17.6■□□□□ 0.41
VARS-216ENST00000428445 UAP1L1Q3KQV9 507 aa17.6■□□□□ 0.41
VARS-216ENST00000428445 LY6G5CQ5SRR4 150 aa17.6■□□□□ 0.41
VARS-216ENST00000428445 SH3PXD2AQ5TCZ1 1133 aa17.6■□□□□ 0.41
VARS-216ENST00000428445 PAQR9Q6ZVX9 377 aa17.6■□□□□ 0.41
VARS-216ENST00000428445 CYP2U1Q7Z449 544 aa17.6■□□□□ 0.41
VARS-216ENST00000428445 B3GALNT2Q8NCR0 500 aa17.6■□□□□ 0.41
VARS-216ENST00000428445 XYLT2Q9H1B5 865 aa17.6■□□□□ 0.41
VARS-216ENST00000428445 KIAA1586Q9HCI6 787 aa17.6■□□□□ 0.41
VARS-216ENST00000428445 SLC39A2Q9NP94 309 aa17.6■□□□□ 0.41
VARS-216ENST00000428445 FSCN3Q9NQT6 498 aa17.6■□□□□ 0.41
VARS-216ENST00000428445 TMEM74BQ9NUR3 256 aa17.6■□□□□ 0.41
VARS-216ENST00000428445 MBD1Q9UIS9 605 aaPredicted RBP17.6■□□□□ 0.41
VARS-216ENST00000428445 ADAMTS9Q9P2N4 1935 aa17.6■□□□□ 0.41
VARS-216ENST00000428445 ASCC3Q8N3C0 2202 aaKnown RBP17.59■□□□□ 0.41
VARS-216ENST00000428445 ATXN2Q99700 1313 aaKnown RBP17.59■□□□□ 0.41
VARS-216ENST00000428445 EIF3DO15371 548 aaKnown RBP eCLIP17.59■□□□□ 0.41
VARS-216ENST00000428445 APODP05090 189 aa17.59■□□□□ 0.41
VARS-216ENST00000428445 YWHAQP27348 245 aa17.59■□□□□ 0.41
VARS-216ENST00000428445 PTGER3P43115 390 aa17.59■□□□□ 0.41
VARS-216ENST00000428445 KIR2DL1P43626 348 aaPredicted RBP17.59■□□□□ 0.41
VARS-216ENST00000428445 MRPS21P82921 87 aaKnown RBP17.59■□□□□ 0.41
VARS-216ENST00000428445 ORC1Q13415 861 aa17.59■□□□□ 0.41
VARS-216ENST00000428445 TRPC3Q13507 836 aa17.59■□□□□ 0.41
VARS-216ENST00000428445 SCARA5Q6ZMJ2 495 aa17.59■□□□□ 0.41
VARS-216ENST00000428445 NUP93Q8N1F7 819 aa17.59■□□□□ 0.41
VARS-216ENST00000428445 XXYLT1Q8NBI6 393 aa17.59■□□□□ 0.41
VARS-216ENST00000428445 OLIG1Q8TAK6 271 aa17.59■□□□□ 0.41
VARS-216ENST00000428445 HMGB4Q8WW32 186 aa17.59■□□□□ 0.41
VARS-216ENST00000428445 FBXO32Q969P5 355 aa17.59■□□□□ 0.41
VARS-216ENST00000428445 ZFRQ96KR1 1074 aaKnown RBP17.59■□□□□ 0.41
VARS-216ENST00000428445 SLITRK1Q96PX8 696 aa17.59■□□□□ 0.41
VARS-216ENST00000428445 C7orf25Q9BPX7 421 aa17.59■□□□□ 0.41
VARS-216ENST00000428445 MED10Q9BTT4 135 aa17.59■□□□□ 0.41
VARS-216ENST00000428445 SDCBP2Q9H190 292 aa17.59■□□□□ 0.41
VARS-216ENST00000428445 CCSER2Q9H7U1 834 aa17.59■□□□□ 0.41
VARS-216ENST00000428445 ARHGEF4Q9NR80 690 aa17.59■□□□□ 0.41
VARS-216ENST00000428445 PI4KAP42356 2102 aa17.59■□□□□ 0.41
VARS-216ENST00000428445 MYH10P35580 1976 aa17.59■□□□□ 0.41
VARS-216ENST00000428445 IRF1P10914 325 aa17.58■□□□□ 0.4
VARS-216ENST00000428445 ADH5P11766 374 aa17.58■□□□□ 0.4
VARS-216ENST00000428445 PDIA4P13667 645 aaKnown RBP17.58■□□□□ 0.4
VARS-216ENST00000428445 PFKLP17858 780 aa17.58■□□□□ 0.4
VARS-216ENST00000428445 WASP42768 502 aa17.58■□□□□ 0.4
VARS-216ENST00000428445 PPP3CCP48454 512 aa17.58■□□□□ 0.4
VARS-216ENST00000428445 GRAMD1CQ8IYS0 662 aa17.58■□□□□ 0.4
VARS-216ENST00000428445 PGBD3Q8N328 593 aa17.58■□□□□ 0.4
VARS-216ENST00000428445 PHTF2Q8N3S3 785 aa17.58■□□□□ 0.4
VARS-216ENST00000428445 CEP295NLQ96MC4 621 aa17.58■□□□□ 0.4
VARS-216ENST00000428445 ELOVL4Q9GZR5 314 aa17.58■□□□□ 0.4
VARS-216ENST00000428445 TMEM9BQ9NQ34 198 aa17.58■□□□□ 0.4
VARS-216ENST00000428445 BCCIPQ9P287 314 aaKnown RBP eCLIP17.58■□□□□ 0.4
VARS-216ENST00000428445 HCN2Q9UL51 889 aa17.58■□□□□ 0.4
VARS-216ENST00000428445 CEP192Q8TEP8 1941 aa17.58■□□□□ 0.4
VARS-216ENST00000428445 TNRC6BQ9UPQ9 1833 aaKnown RBP17.58■□□□□ 0.4
VARS-216ENST00000428445 ASPMQ8IZT6 3477 aa17.57■□□□□ 0.4
VARS-216ENST00000428445 SLC9A3R1O14745 358 aaPredicted RBP17.57■□□□□ 0.4
VARS-216ENST00000428445 POLR2DO15514 142 aaKnown RBP17.57■□□□□ 0.4
VARS-216ENST00000428445 MAP3K13O43283 966 aa17.57■□□□□ 0.4
VARS-216ENST00000428445 PHACTR2O75167 634 aa17.57■□□□□ 0.4
VARS-216ENST00000428445 BEST1O76090 585 aa17.57■□□□□ 0.4
VARS-216ENST00000428445 CLSTN1O94985 981 aa17.57■□□□□ 0.4
VARS-216ENST00000428445 P2RY2P41231 377 aa17.57■□□□□ 0.4
VARS-216ENST00000428445 AFMP43652 599 aa17.57■□□□□ 0.4
VARS-216ENST00000428445 EHHADHQ08426 723 aa17.57■□□□□ 0.4
VARS-216ENST00000428445 ZNF252P-AS1Q0IIN9 211 aa17.57■□□□□ 0.4
VARS-216ENST00000428445 CUL4BQ13620 913 aa17.57■□□□□ 0.4
VARS-216ENST00000428445 DAB2IPQ5VWQ8 1189 aa17.57■□□□□ 0.4
VARS-216ENST00000428445 TMEM25Q86YD3 366 aa17.57■□□□□ 0.4
VARS-216ENST00000428445 BBS7Q8IWZ6 715 aa17.57■□□□□ 0.4
VARS-216ENST00000428445 DEFB124Q8NES8 71 aa17.57■□□□□ 0.4
VARS-216ENST00000428445 CCDC26Q8TAB7 109 aa17.57■□□□□ 0.4
VARS-216ENST00000428445 CUEDC2Q9H467 287 aa17.57■□□□□ 0.4
VARS-216ENST00000428445 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.57■□□□□ 0.47e-6■■■■■ 74.5
VARS-216ENST00000428445 EHD2Q9NZN4 543 aa17.57■□□□□ 0.4
VARS-216ENST00000428445 GMIPQ9P107 970 aa17.57■□□□□ 0.4
VARS-216ENST00000428445 A0A0A0MRY4 1105 aa17.56■□□□□ 0.4
VARS-216ENST00000428445 TCRBV21S2A2A0A5A6 115 aa17.56■□□□□ 0.4
VARS-216ENST00000428445 TBC1D3BA6NDS4 549 aa17.56■□□□□ 0.4
VARS-216ENST00000428445 TNFRSF10BO14763 440 aa17.56■□□□□ 0.4
VARS-216ENST00000428445 PPP6R2O75170 966 aa17.56■□□□□ 0.4
VARS-216ENST00000428445 ALDH1A2O94788 518 aa17.56■□□□□ 0.4
VARS-216ENST00000428445 GRIA2P42262 883 aa17.56■□□□□ 0.4
VARS-216ENST00000428445 MAPK8P45983 427 aa17.56■□□□□ 0.4
VARS-216ENST00000428445 SLC5A3P53794 718 aa17.56■□□□□ 0.4
VARS-216ENST00000428445 AMPD3Q01432 767 aa17.56■□□□□ 0.4
VARS-216ENST00000428445 MAP7D1Q3KQU3 841 aa17.56■□□□□ 0.4
VARS-216ENST00000428445 TRIM61Q5EBN2 209 aa17.56■□□□□ 0.4
VARS-216ENST00000428445 HECTD3Q5T447 861 aa17.56■□□□□ 0.4
VARS-216ENST00000428445 UNC13DQ70J99 1090 aa17.56■□□□□ 0.4
VARS-216ENST00000428445 ACOT1Q86TX2 421 aa17.56■□□□□ 0.4
VARS-216ENST00000428445 FAM35AQ86V20 835 aa17.56■□□□□ 0.4
VARS-216ENST00000428445 MIB1Q86YT6 1006 aa17.56■□□□□ 0.4
VARS-216ENST00000428445 IQUBQ8NA54 791 aa17.56■□□□□ 0.4
VARS-216ENST00000428445 E2F8A0AVK6 867 aa17.55■□□□□ 0.4
VARS-216ENST00000428445 LRRIQ3A6PVS8 624 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms