RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 STRNO43815 780 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 CRTAMO95727 393 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 APOA1P02647 267 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 NR3C2P08235 984 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 PDGFRAP16234 1089 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 GPD1P21695 349 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 S100GP29377 79 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 PRDX5P30044 214 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 PDIA2Q13087 525 aaKnown RBP5.93□□□□□ -1.46
HERC4-206ENST00000427635 ALKBH5Q6P6C2 394 aaKnown RBP5.93□□□□□ -1.46
HERC4-206ENST00000427635 IYDQ6PHW0 289 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 DOK6Q6PKX4 331 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 NRSN1Q8IZ57 195 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 LRRC71Q8N4P6 559 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 DPP10Q8N608 796 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 CELF1Q92879 486 aaKnown RBP5.93□□□□□ -1.46
HERC4-206ENST00000427635 REPS1Q96D71 796 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 CYFIP2Q96F07 1278 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 SNF8Q96H20 258 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 MAGED4Q96JG8 741 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 CARD14Q9BXL6 1004 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 UBE2OQ9C0C9 1292 aaKnown RBP5.93□□□□□ -1.46
HERC4-206ENST00000427635 MCM8Q9UJA3 840 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 GTF3C4Q9UKN8 822 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 ZNF232Q9UNY5 417 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 CDK12Q9NYV4 1490 aaPredicted RBP5.93□□□□□ -1.46
HERC4-206ENST00000427635 CDHR2Q9BYE9 1310 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 MGAT4DA6NG13 374 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 H3BUI4 141 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 WWP2O00308 870 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 IFNA14P01570 189 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 IFNA16P05015 189 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 CLTBP09497 229 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 POTEIP0CG38 1075 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 GNSP15586 552 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 HTR1BP28222 390 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 SESN2P58004 480 aaPredicted RBP5.93□□□□□ -1.46
HERC4-206ENST00000427635 TUBA1BP68363 451 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 EDRF1Q3B7T1 1238 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 NAPEPLDQ6IQ20 393 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 POTEGQ6S5H5 508 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 POTEEQ6S8J3 1075 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 TUBA1AQ71U36 451 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 SMYD4Q8IYR2 804 aaPredicted RBP5.93□□□□□ -1.46
HERC4-206ENST00000427635 ADGRF2Q8IZF7 708 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 EEF2KMTQ96G04 330 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 CRELD1Q96HD1 420 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 WNK4Q96J92 1243 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 FBXO44Q9H4M3 255 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 GPSM3Q9Y4H4 160 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 ARHGAP31Q2M1Z3 1444 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 WBP4O75554 376 aaKnown RBP5.93□□□□□ -1.46
HERC4-206ENST00000427635 CAPN1P07384 714 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 CYP2C8P10632 490 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 PLA2G4AP47712 749 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 ST13P50502 369 aaKnown RBP5.93□□□□□ -1.46
HERC4-206ENST00000427635 EFEMP1Q12805 493 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 NOGQ13253 232 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 NNTQ13423 1086 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 ZNHIT3Q15649 155 aaPredicted RBP5.93□□□□□ -1.46
HERC4-206ENST00000427635 SETMARQ53H47 684 aaPredicted RBP5.93□□□□□ -1.46
HERC4-206ENST00000427635 PRR23BQ6ZRT6 265 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 PALB2Q86YC2 1186 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 C7orf61Q8IZ16 206 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 NUP93Q8N1F7 819 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 RDM1Q8NG50 284 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 HPS3Q969F9 1004 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 CXorf40BQ96DE9 158 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 BBS2Q9BXC9 721 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 CAAP1Q9H8G2 361 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.93□□□□□ -1.46
HERC4-206ENST00000427635 TTC7AQ9ULT0 858 aaPredicted RBP5.93□□□□□ -1.46
HERC4-206ENST00000427635 CEP170Q5SW79 1584 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 EMSYQ7Z589 1322 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 A0A1W2PQ27 194 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 A0A1W2PQ64 194 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 A0A1W2PQD8 194 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 POTEMA6NI47 508 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 RASA4BC9J798 803 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 H3BMM5 538 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 RASA4O43374 803 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 FGRP09769 529 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 CLUP10909 449 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 CYP19A1P11511 503 aaPredicted RBP5.92□□□□□ -1.46
HERC4-206ENST00000427635 IFNAR1P17181 557 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 ITGAXP20702 1163 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 PPP2R1BP30154 601 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 NOS2P35228 1153 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 KCNK10P57789 538 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 SNRPFP62306 86 aaKnown RBP5.92□□□□□ -1.46
HERC4-206ENST00000427635 SMAD1Q15797 465 aaKnown RBP5.92□□□□□ -1.46
HERC4-206ENST00000427635 GRAMD4Q6IC98 578 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 HIBCHQ6NVY1 386 aaPredicted RBP5.92□□□□□ -1.46
HERC4-206ENST00000427635 AHI1Q8N157 1196 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 FAR1Q8WVX9 515 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 RERGQ96A58 199 aaPredicted RBP5.92□□□□□ -1.46
HERC4-206ENST00000427635 VPS33AQ96AX1 596 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 C19orf60Q96EN9 201 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 MED8Q96G25 268 aa5.92□□□□□ -1.46
HERC4-206ENST00000427635 RIPOR3Q96MK2 946 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms